RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.53■□□□□ 0.24
LIMK2-203ENST00000340552 KIAA0895Q8NCT3 520 aa16.53■□□□□ 0.24
LIMK2-203ENST00000340552 MGARPQ8TDB4 240 aa16.53■□□□□ 0.24
LIMK2-203ENST00000340552 RAB3IPQ96QF0 476 aaPredicted RBP16.53■□□□□ 0.24
LIMK2-203ENST00000340552 CCDC113Q9H0I3 377 aa16.53■□□□□ 0.24
LIMK2-203ENST00000340552 VCXQ9H320 206 aa16.53■□□□□ 0.24
LIMK2-203ENST00000340552 DNAAF2Q9NVR5 837 aaKnown RBP16.53■□□□□ 0.24
LIMK2-203ENST00000340552 GREB1LQ9C091 1923 aaPredicted RBP16.53■□□□□ 0.24
LIMK2-203ENST00000340552 H0Y3Z8 333 aa16.53■□□□□ 0.24
LIMK2-203ENST00000340552 O00370 1275 aa16.53■□□□□ 0.24
LIMK2-203ENST00000340552 CREB3O43889 395 aa16.53■□□□□ 0.24
LIMK2-203ENST00000340552 UNC5CO95185 931 aa16.53■□□□□ 0.24
LIMK2-203ENST00000340552 ZBTB7AO95365 584 aa16.53■□□□□ 0.24
LIMK2-203ENST00000340552 SLCO1A2P46721 670 aa16.53■□□□□ 0.24
LIMK2-203ENST00000340552 NAPAP54920 295 aa16.53■□□□□ 0.24
LIMK2-203ENST00000340552 SLC29A2Q14542 456 aa16.53■□□□□ 0.24
LIMK2-203ENST00000340552 ASPRV1Q53RT3 343 aa16.53■□□□□ 0.24
LIMK2-203ENST00000340552 DAGLBQ8NCG7 672 aa16.53■□□□□ 0.24
LIMK2-203ENST00000340552 UHMK1Q8TAS1 419 aaKnown RBP16.53■□□□□ 0.24
LIMK2-203ENST00000340552 EPS8L3Q8TE67 593 aaKnown RBP16.53■□□□□ 0.24
LIMK2-203ENST00000340552 NUDCD1Q96RS6 583 aa16.53■□□□□ 0.24
LIMK2-203ENST00000340552 PIGSQ96S52 555 aa16.53■□□□□ 0.24
LIMK2-203ENST00000340552 DDX23Q9BUQ8 820 aaKnown RBP16.53■□□□□ 0.24
LIMK2-203ENST00000340552 PRKAG3Q9UGI9 489 aa16.53■□□□□ 0.24
LIMK2-203ENST00000340552 ADAMTS1Q9UHI8 967 aa16.53■□□□□ 0.24
LIMK2-203ENST00000340552 BLOC1S6Q9UL45 172 aa16.53■□□□□ 0.24
LIMK2-203ENST00000340552 CCDC194A0A1B0GVG4 234 aa16.52■□□□□ 0.24
LIMK2-203ENST00000340552 M0R2N6 131 aa16.52■□□□□ 0.24
LIMK2-203ENST00000340552 ECEL1O95672 775 aa16.52■□□□□ 0.24
LIMK2-203ENST00000340552 SNHG28P0DPA3 235 aa16.52■□□□□ 0.24
LIMK2-203ENST00000340552 POU5F1Q01860 360 aaKnown RBP16.52■□□□□ 0.24
LIMK2-203ENST00000340552 ARID5AQ03989 594 aa16.52■□□□□ 0.24
LIMK2-203ENST00000340552 ENOX2Q16206 610 aaKnown RBP16.52■□□□□ 0.24
LIMK2-203ENST00000340552 TSNAXIP1Q2TAA8 658 aa16.52■□□□□ 0.24
LIMK2-203ENST00000340552 PABPC1LQ4VXU2 614 aaKnown RBP16.52■□□□□ 0.24
LIMK2-203ENST00000340552 RSBN1LQ6PCB5 846 aaPredicted RBP16.52■□□□□ 0.24
LIMK2-203ENST00000340552 SYCP3Q8IZU3 236 aa16.52■□□□□ 0.24
LIMK2-203ENST00000340552 TRIM7Q9C029 511 aa16.52■□□□□ 0.24
LIMK2-203ENST00000340552 RIOX1Q9H6W3 641 aa16.52■□□□□ 0.24
LIMK2-203ENST00000340552 ZDHHC18Q9NUE0 388 aa16.52■□□□□ 0.24
LIMK2-203ENST00000340552 PCDHA6Q9UN73 950 aa16.52■□□□□ 0.24
LIMK2-203ENST00000340552 PCDHA8Q9Y5H6 950 aa16.52■□□□□ 0.24
LIMK2-203ENST00000340552 KIF13BQ9NQT8 1826 aa16.52■□□□□ 0.24
LIMK2-203ENST00000340552 NOL4O94818 638 aa16.52■□□□□ 0.23
LIMK2-203ENST00000340552 TPP2P29144 1249 aaPredicted RBP16.52■□□□□ 0.23
LIMK2-203ENST00000340552 SKIV2L2P42285 1042 aaKnown RBP16.52■□□□□ 0.23
LIMK2-203ENST00000340552 IRGCQ6NXR0 463 aa16.52■□□□□ 0.23
LIMK2-203ENST00000340552 DNAAF5Q86Y56 855 aa16.52■□□□□ 0.23
LIMK2-203ENST00000340552 DYDC1Q8WWB3 177 aa16.52■□□□□ 0.23
LIMK2-203ENST00000340552 PHF24Q9UPV7 400 aa16.52■□□□□ 0.23
LIMK2-203ENST00000340552 MTA1Q13330 715 aa16.51■□□□□ 0.23
LIMK2-203ENST00000340552 CERKLQ49MI3 558 aaPredicted RBP16.51■□□□□ 0.23
LIMK2-203ENST00000340552 ENDOVQ8N8Q3 282 aaKnown RBP16.51■□□□□ 0.23
LIMK2-203ENST00000340552 LRRC57Q8N9N7 239 aa16.51■□□□□ 0.23
LIMK2-203ENST00000340552 FAM13CQ8NE31 585 aa16.51■□□□□ 0.23
LIMK2-203ENST00000340552 MMTAG2Q9BU76 263 aaKnown RBP16.51■□□□□ 0.23
LIMK2-203ENST00000340552 TRIM9Q9C026 710 aa16.51■□□□□ 0.23
LIMK2-203ENST00000340552 ZWILCHQ9H900 591 aa16.51■□□□□ 0.23
LIMK2-203ENST00000340552 GPCPD1Q9NPB8 672 aa16.51■□□□□ 0.23
LIMK2-203ENST00000340552 SETSIPP0DME0 302 aa16.51■□□□□ 0.23
LIMK2-203ENST00000340552 ASIC1P78348 528 aa16.51■□□□□ 0.23
LIMK2-203ENST00000340552 CENPPQ6IPU0 288 aa16.51■□□□□ 0.23
LIMK2-203ENST00000340552 NDNQ99608 321 aa16.51■□□□□ 0.23
LIMK2-203ENST00000340552 EDEM3Q9BZQ6 932 aa16.51■□□□□ 0.23
LIMK2-203ENST00000340552 MMADHCQ9H3L0 296 aaPredicted RBP16.51■□□□□ 0.23
LIMK2-203ENST00000340552 NR2E1Q9Y466 385 aa16.51■□□□□ 0.23
LIMK2-203ENST00000340552 COL4A5P29400 1685 aa16.5■□□□□ 0.23
LIMK2-203ENST00000340552 ENTPD3O75355 529 aa16.5■□□□□ 0.23
LIMK2-203ENST00000340552 VIL1P09327 827 aaKnown RBP16.5■□□□□ 0.23
LIMK2-203ENST00000340552 UBA7P41226 1012 aa16.5■□□□□ 0.23
LIMK2-203ENST00000340552 PARP6Q2NL67 630 aa16.5■□□□□ 0.23
LIMK2-203ENST00000340552 FAM83BQ5T0W9 1011 aa16.5■□□□□ 0.23
LIMK2-203ENST00000340552 C6orf118Q5T5N4 469 aa16.5■□□□□ 0.23
LIMK2-203ENST00000340552 TTC8Q8TAM2 541 aa16.5■□□□□ 0.23
LIMK2-203ENST00000340552 PICK1Q9NRD5 415 aa16.5■□□□□ 0.23
LIMK2-203ENST00000340552 SCOCQ9UIL1 159 aa16.5■□□□□ 0.23
LIMK2-203ENST00000340552 DBR1Q9UK59 544 aaKnown RBP16.5■□□□□ 0.23
LIMK2-203ENST00000340552 SMCO2A6NFE2 343 aa16.5■□□□□ 0.23
LIMK2-203ENST00000340552 AFPP02771 609 aaKnown RBP16.5■□□□□ 0.23
LIMK2-203ENST00000340552 PSMC4P43686 418 aa16.5■□□□□ 0.23
LIMK2-203ENST00000340552 KLRC3Q07444 240 aa16.5■□□□□ 0.23
LIMK2-203ENST00000340552 ZNF543Q08ER8 600 aa16.5■□□□□ 0.23
LIMK2-203ENST00000340552 MUM1Q2TAK8 710 aa16.5■□□□□ 0.23
LIMK2-203ENST00000340552 CGB2Q6NT52 195 aa16.5■□□□□ 0.23
LIMK2-203ENST00000340552 RASGEF1CQ8N431 466 aa16.5■□□□□ 0.23
LIMK2-203ENST00000340552 TMEM237Q96Q45 408 aa16.5■□□□□ 0.23
LIMK2-203ENST00000340552 MLXIPLQ9NP71 852 aa16.5■□□□□ 0.23
LIMK2-203ENST00000340552 PIM2Q9P1W9 311 aa16.5■□□□□ 0.23
LIMK2-203ENST00000340552 CEP72Q9P209 647 aa16.5■□□□□ 0.23
LIMK2-203ENST00000340552 CTNNAL1Q9UBT7 734 aa16.5■□□□□ 0.23
LIMK2-203ENST00000340552 ATF5Q9Y2D1 282 aaPredicted RBP16.5■□□□□ 0.23
LIMK2-203ENST00000340552 SHROOM1Q2M3G4 852 aaPredicted RBP16.49■□□□□ 0.23
LIMK2-203ENST00000340552 TNFAIP8L3Q5GJ75 292 aa16.49■□□□□ 0.23
LIMK2-203ENST00000340552 DTHD1Q6ZMT9 781 aa16.49■□□□□ 0.23
LIMK2-203ENST00000340552 DAAM2Q86T65 1068 aa16.49■□□□□ 0.23
LIMK2-203ENST00000340552 ECHDC2Q86YB7 292 aa16.49■□□□□ 0.23
LIMK2-203ENST00000340552 RBBP8NLQ8NC74 664 aaPredicted RBP16.49■□□□□ 0.23
LIMK2-203ENST00000340552 ZNF333Q96JL9 665 aa16.49■□□□□ 0.23
LIMK2-203ENST00000340552 TMEM60Q9H2L4 133 aa16.49■□□□□ 0.23
LIMK2-203ENST00000340552 C6orf50Q9HD87 102 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms