RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 PAN2Q504Q3 1202 aaKnown RBP16.83■□□□□ 0.28
UBE3B-201ENST00000340074 NOTUMQ6P988 496 aa16.83■□□□□ 0.28
UBE3B-201ENST00000340074 ARNTL2Q8WYA1 636 aa16.83■□□□□ 0.28
UBE3B-201ENST00000340074 PRDM12Q9H4Q4 367 aa16.83■□□□□ 0.28
UBE3B-201ENST00000340074 KMT5AQ9NQR1 393 aa16.83■□□□□ 0.28
UBE3B-201ENST00000340074 PRMT7Q9NVM4 692 aaPredicted RBP16.83■□□□□ 0.28
UBE3B-201ENST00000340074 MTUS1Q9ULD2 1270 aa16.83■□□□□ 0.28
UBE3B-201ENST00000340074 ODF2LQ9ULJ1 636 aa16.83■□□□□ 0.28
UBE3B-201ENST00000340074 TTLL13PA6NNM8 815 aa16.82■□□□□ 0.28
UBE3B-201ENST00000340074 EDN1P05305 212 aa16.82■□□□□ 0.28
UBE3B-201ENST00000340074 PRKCBP05771 671 aa16.82■□□□□ 0.28
UBE3B-201ENST00000340074 SKIP12755 728 aa16.82■□□□□ 0.28
UBE3B-201ENST00000340074 PLS3P13797 630 aa16.82■□□□□ 0.28
UBE3B-201ENST00000340074 EFNA5P52803 228 aa16.82■□□□□ 0.28
UBE3B-201ENST00000340074 GIT2Q14161 759 aa16.82■□□□□ 0.28
UBE3B-201ENST00000340074 FAM187BQ17R55 369 aa16.82■□□□□ 0.28
UBE3B-201ENST00000340074 LONRF3Q496Y0 759 aa16.82■□□□□ 0.28
UBE3B-201ENST00000340074 UBXN11Q5T124 520 aa16.82■□□□□ 0.28
UBE3B-201ENST00000340074 RESP18Q5W5W9 173 aa16.82■□□□□ 0.28
UBE3B-201ENST00000340074 PPP4R3CPQ6ZMV5 832 aa16.82■□□□□ 0.28
UBE3B-201ENST00000340074 SV2BQ7L1I2 683 aa16.82■□□□□ 0.28
UBE3B-201ENST00000340074 ZNF598Q86UK7 904 aaKnown RBP16.82■□□□□ 0.28
UBE3B-201ENST00000340074 CDR2LQ86X02 465 aaPredicted RBP16.82■□□□□ 0.28
UBE3B-201ENST00000340074 CMTR2Q8IYT2 770 aaKnown RBP16.82■□□□□ 0.28
UBE3B-201ENST00000340074 FIBCD1Q8N539 461 aa16.82■□□□□ 0.28
UBE3B-201ENST00000340074 LPPQ93052 612 aa16.82■□□□□ 0.28
UBE3B-201ENST00000340074 PRIMPOLQ96LW4 560 aa16.82■□□□□ 0.28
UBE3B-201ENST00000340074 TGS1Q96RS0 853 aaKnown RBP16.82■□□□□ 0.28
UBE3B-201ENST00000340074 CDX2Q99626 313 aaPredicted RBP16.82■□□□□ 0.28
UBE3B-201ENST00000340074 C17orf80Q9BSJ5 609 aa16.82■□□□□ 0.28
UBE3B-201ENST00000340074 SCAND2PQ9GZW5 306 aaPredicted RBP16.82■□□□□ 0.28
UBE3B-201ENST00000340074 RNF19AQ9NV58 838 aa16.82■□□□□ 0.28
UBE3B-201ENST00000340074 USP20Q9Y2K6 914 aa16.82■□□□□ 0.28
UBE3B-201ENST00000340074 PCDHB2Q9Y5E7 798 aa16.82■□□□□ 0.28
UBE3B-201ENST00000340074 PRUNE2Q8WUY3 3088 aa16.82■□□□□ 0.28
UBE3B-201ENST00000340074 PLXNA4Q9HCM2 1894 aa16.82■□□□□ 0.28
UBE3B-201ENST00000340074 ATG2AQ2TAZ0 1938 aa16.81■□□□□ 0.28
UBE3B-201ENST00000340074 EPOPA6NHQ4 379 aa16.81■□□□□ 0.28
UBE3B-201ENST00000340074 K7ERI5 159 aa16.81■□□□□ 0.28
UBE3B-201ENST00000340074 SLC16A4O15374 487 aa16.81■□□□□ 0.28
UBE3B-201ENST00000340074 ZNF623O75123 536 aa16.81■□□□□ 0.28
UBE3B-201ENST00000340074 RAB27AP51159 221 aa16.81■□□□□ 0.28
UBE3B-201ENST00000340074 ERVK-21P61565 698 aa16.81■□□□□ 0.28
UBE3B-201ENST00000340074 PRPF4BQ13523 1007 aaKnown RBP16.81■□□□□ 0.28
UBE3B-201ENST00000340074 E2F4Q16254 413 aa16.81■□□□□ 0.28
UBE3B-201ENST00000340074 DYMQ7RTS9 669 aa16.81■□□□□ 0.28
UBE3B-201ENST00000340074 MYLIPQ8WY64 445 aa16.81■□□□□ 0.28
UBE3B-201ENST00000340074 DHX58Q96C10 678 aa16.81■□□□□ 0.28
UBE3B-201ENST00000340074 CCDC51Q96ER9 411 aa16.81■□□□□ 0.28
UBE3B-201ENST00000340074 NTPCRQ9BSD7 190 aaKnown RBP16.81■□□□□ 0.28
UBE3B-201ENST00000340074 EIF2AQ9BY44 585 aaKnown RBP16.81■□□□□ 0.28
UBE3B-201ENST00000340074 FAM13BQ9NYF5 915 aa16.81■□□□□ 0.28
UBE3B-201ENST00000340074 ARHGAP28Q9P2N2 729 aa16.81■□□□□ 0.28
UBE3B-201ENST00000340074 PHLPP2Q6ZVD8 1323 aa16.81■□□□□ 0.28
UBE3B-201ENST00000340074 CNTNAP2Q9UHC6 1331 aa16.81■□□□□ 0.28
UBE3B-201ENST00000340074 A0A1B0GUA9 196 aa16.8■□□□□ 0.28
UBE3B-201ENST00000340074 TBKBP1A7MCY6 615 aa16.8■□□□□ 0.28
UBE3B-201ENST00000340074 MEIS3P2A8K0S8 358 aa16.8■□□□□ 0.28
UBE3B-201ENST00000340074 RFXAPO00287 272 aa16.8■□□□□ 0.28
UBE3B-201ENST00000340074 ACKR2O00590 384 aa16.8■□□□□ 0.28
UBE3B-201ENST00000340074 POLR2DO15514 142 aaKnown RBP16.8■□□□□ 0.28
UBE3B-201ENST00000340074 FAM13AO94988 1023 aa16.8■□□□□ 0.28
UBE3B-201ENST00000340074 LINC00271P0C7V0 271 aa16.8■□□□□ 0.28
UBE3B-201ENST00000340074 ZNF131P52739 623 aa16.8■□□□□ 0.28
UBE3B-201ENST00000340074 TMEM132AQ24JP5 1023 aa16.8■□□□□ 0.28
UBE3B-201ENST00000340074 CLLU1OSQ5K130 101 aa16.8■□□□□ 0.28
UBE3B-201ENST00000340074 ADALQ6DHV7 355 aa16.8■□□□□ 0.28
UBE3B-201ENST00000340074 ABI1Q8IZP0 508 aa16.8■□□□□ 0.28
UBE3B-201ENST00000340074 SPIRE2Q8WWL2 714 aa16.8■□□□□ 0.28
UBE3B-201ENST00000340074 DDX12PQ92771 950 aa16.8■□□□□ 0.28
UBE3B-201ENST00000340074 CASD1Q96PB1 797 aa16.8■□□□□ 0.28
UBE3B-201ENST00000340074 ZHX3Q9H4I2 956 aa16.8■□□□□ 0.28
UBE3B-201ENST00000340074 TMEM134Q9H6X4 195 aa16.8■□□□□ 0.28
UBE3B-201ENST00000340074 PARVGQ9HBI0 331 aa16.8■□□□□ 0.28
UBE3B-201ENST00000340074 GDPD2Q9HCC8 539 aa16.8■□□□□ 0.28
UBE3B-201ENST00000340074 LARSQ9P2J5 1176 aaKnown RBP16.8■□□□□ 0.28
UBE3B-201ENST00000340074 RBM19Q9Y4C8 960 aaKnown RBP16.8■□□□□ 0.28
UBE3B-201ENST00000340074 MRPL42Q9Y6G3 142 aaKnown RBP16.8■□□□□ 0.28
UBE3B-201ENST00000340074 CITO14578 2027 aa16.8■□□□□ 0.28
UBE3B-201ENST00000340074 MYMKA6NI61 221 aa16.79■□□□□ 0.28
UBE3B-201ENST00000340074 HOXA2O43364 376 aa16.79■□□□□ 0.28
UBE3B-201ENST00000340074 SMTNP53814 917 aa16.79■□□□□ 0.28
UBE3B-201ENST00000340074 EPC2Q52LR7 807 aa16.79■□□□□ 0.28
UBE3B-201ENST00000340074 TAS1R3Q7RTX0 852 aa16.79■□□□□ 0.28
UBE3B-201ENST00000340074 MYCT1Q8N699 235 aa16.79■□□□□ 0.28
UBE3B-201ENST00000340074 IQUBQ8NA54 791 aa16.79■□□□□ 0.28
UBE3B-201ENST00000340074 SMG8Q8ND04 991 aaKnown RBP16.79■□□□□ 0.28
UBE3B-201ENST00000340074 HELQQ8TDG4 1101 aa16.79■□□□□ 0.28
UBE3B-201ENST00000340074 STAMQ92783 540 aa16.79■□□□□ 0.28
UBE3B-201ENST00000340074 CLP1Q92989 425 aaKnown RBP16.79■□□□□ 0.28
UBE3B-201ENST00000340074 TRIM6Q9C030 488 aaPredicted RBP16.79■□□□□ 0.28
UBE3B-201ENST00000340074 TMEM117Q9H0C3 514 aa16.79■□□□□ 0.28
UBE3B-201ENST00000340074 KCNG1Q9UIX4 513 aa16.79■□□□□ 0.28
UBE3B-201ENST00000340074 IPPQ9Y573 584 aa16.79■□□□□ 0.28
UBE3B-201ENST00000340074 TBCAO75347 108 aaKnown RBP16.79■□□□□ 0.28
UBE3B-201ENST00000340074 NPTXRO95502 500 aa16.79■□□□□ 0.28
UBE3B-201ENST00000340074 NCKAP1LP55160 1127 aa16.79■□□□□ 0.28
UBE3B-201ENST00000340074 TPRNQ4KMQ1 711 aa16.79■□□□□ 0.28
UBE3B-201ENST00000340074 NT5DC1Q5TFE4 455 aa16.79■□□□□ 0.28
UBE3B-201ENST00000340074 SLC27A1Q6PCB7 646 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms