RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 ALG13Q9NP73 1137 aaKnown RBP16.91■□□□□ 0.3
PRKN-201ENST00000338468 DNM3Q9UQ16 869 aa16.91■□□□□ 0.3
PRKN-201ENST00000338468 PCDHB2Q9Y5E7 798 aa16.91■□□□□ 0.3
PRKN-201ENST00000338468 MYO7AQ13402 2215 aa16.9■□□□□ 0.3
PRKN-201ENST00000338468 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.9■□□□□ 0.3
PRKN-201ENST00000338468 LRRIQ4A6NIV6 560 aa16.9■□□□□ 0.3
PRKN-201ENST00000338468 BMP15O95972 392 aa16.9■□□□□ 0.3
PRKN-201ENST00000338468 ARF4P18085 180 aaPredicted RBP16.9■□□□□ 0.3
PRKN-201ENST00000338468 RAB27AP51159 221 aa16.9■□□□□ 0.3
PRKN-201ENST00000338468 PTPROQ16827 1216 aa16.9■□□□□ 0.3
PRKN-201ENST00000338468 NAALADL2Q58DX5 795 aa16.9■□□□□ 0.3
PRKN-201ENST00000338468 COLGALT1Q8NBJ5 622 aa16.9■□□□□ 0.3
PRKN-201ENST00000338468 SPPL3Q8TCT6 385 aa16.9■□□□□ 0.3
PRKN-201ENST00000338468 PLIN2Q99541 437 aa16.9■□□□□ 0.3
PRKN-201ENST00000338468 EIF2AQ9BY44 585 aaKnown RBP16.9■□□□□ 0.3
PRKN-201ENST00000338468 FZD8Q9H461 694 aa16.9■□□□□ 0.3
PRKN-201ENST00000338468 PLXNA4Q9HCM2 1894 aa16.9■□□□□ 0.3
PRKN-201ENST00000338468 TTLL13PA6NNM8 815 aa16.89■□□□□ 0.29
PRKN-201ENST00000338468 OFD1O75665 1012 aa16.89■□□□□ 0.29
PRKN-201ENST00000338468 ERLIN2O94905 339 aa16.89■□□□□ 0.29
PRKN-201ENST00000338468 EDN1P05305 212 aa16.89■□□□□ 0.29
PRKN-201ENST00000338468 SKIP12755 728 aa16.89■□□□□ 0.29
PRKN-201ENST00000338468 ALADP13716 330 aa16.89■□□□□ 0.29
PRKN-201ENST00000338468 AXLP30530 894 aa16.89■□□□□ 0.29
PRKN-201ENST00000338468 MAPK7Q13164 816 aa16.89■□□□□ 0.29
PRKN-201ENST00000338468 ZRSR1Q15695 479 aaKnown RBP16.89■□□□□ 0.29
PRKN-201ENST00000338468 PTCRAQ6ISU1 281 aaPredicted RBP16.89■□□□□ 0.29
PRKN-201ENST00000338468 RINT1Q6NUQ1 792 aa16.89■□□□□ 0.29
PRKN-201ENST00000338468 C1orf186Q6ZWK4 172 aa16.89■□□□□ 0.29
PRKN-201ENST00000338468 CABP7Q86V35 215 aa16.89■□□□□ 0.29
PRKN-201ENST00000338468 LRRC43Q8N309 656 aa16.89■□□□□ 0.29
PRKN-201ENST00000338468 SMG8Q8ND04 991 aaKnown RBP16.89■□□□□ 0.29
PRKN-201ENST00000338468 AK8Q96MA6 479 aa16.89■□□□□ 0.29
PRKN-201ENST00000338468 CCDC113Q9H0I3 377 aa16.89■□□□□ 0.29
PRKN-201ENST00000338468 LMAN2LQ9H0V9 348 aa16.89■□□□□ 0.29
PRKN-201ENST00000338468 LONP1P36776 959 aaKnown RBP16.88■□□□□ 0.29
PRKN-201ENST00000338468 PBX3P40426 434 aa16.88■□□□□ 0.29
PRKN-201ENST00000338468 NAMPTP43490 491 aa16.88■□□□□ 0.29
PRKN-201ENST00000338468 AFF1P51825 1210 aaKnown RBP16.88■□□□□ 0.29
PRKN-201ENST00000338468 FAM187BQ17R55 369 aa16.88■□□□□ 0.29
PRKN-201ENST00000338468 CSPP1Q1MSJ5 1256 aa16.88■□□□□ 0.29
PRKN-201ENST00000338468 PUS10Q3MIT2 529 aaKnown RBP16.88■□□□□ 0.29
PRKN-201ENST00000338468 SPOUT1Q5T280 376 aaKnown RBP16.88■□□□□ 0.29
PRKN-201ENST00000338468 PPP4R3CPQ6ZMV5 832 aa16.88■□□□□ 0.29
PRKN-201ENST00000338468 ALYREFQ86V81 257 aaKnown RBP16.88■□□□□ 0.29
PRKN-201ENST00000338468 CDR2LQ86X02 465 aaPredicted RBP16.88■□□□□ 0.29
PRKN-201ENST00000338468 ABI1Q8IZP0 508 aa16.88■□□□□ 0.29
PRKN-201ENST00000338468 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.88■□□□□ 0.29
PRKN-201ENST00000338468 KIFAP3Q92845 792 aa16.88■□□□□ 0.29
PRKN-201ENST00000338468 CCDC51Q96ER9 411 aa16.88■□□□□ 0.29
PRKN-201ENST00000338468 USP28Q96RU2 1077 aa16.88■□□□□ 0.29
PRKN-201ENST00000338468 KIFC3Q9BVG8 833 aa16.88■□□□□ 0.29
PRKN-201ENST00000338468 CSRNP2Q9H175 543 aa16.88■□□□□ 0.29
PRKN-201ENST00000338468 RNF39Q9H2S5 420 aa16.88■□□□□ 0.29
PRKN-201ENST00000338468 FBXO2Q9UK22 296 aaPredicted RBP16.88■□□□□ 0.29
PRKN-201ENST00000338468 USP20Q9Y2K6 914 aa16.88■□□□□ 0.29
PRKN-201ENST00000338468 B4GALT3O60512 393 aa16.87■□□□□ 0.29
PRKN-201ENST00000338468 FGF18O76093 207 aa16.87■□□□□ 0.29
PRKN-201ENST00000338468 IL9P15248 144 aa16.87■□□□□ 0.29
PRKN-201ENST00000338468 LAG3P18627 525 aa16.87■□□□□ 0.29
PRKN-201ENST00000338468 NCLP19338 710 aaKnown RBP16.87■□□□□ 0.29
PRKN-201ENST00000338468 IRS1P35568 1242 aa16.87■□□□□ 0.29
PRKN-201ENST00000338468 SLC12A3P55017 1021 aa16.87■□□□□ 0.29
PRKN-201ENST00000338468 TIGD5Q53EQ6 642 aa16.87■□□□□ 0.29
PRKN-201ENST00000338468 TCEAL5Q5H9L2 206 aa16.87■□□□□ 0.29
PRKN-201ENST00000338468 NOTUMQ6P988 496 aa16.87■□□□□ 0.29
PRKN-201ENST00000338468 KCNT2Q6UVM3 1135 aa16.87■□□□□ 0.29
PRKN-201ENST00000338468 USP49Q70CQ1 688 aa16.87■□□□□ 0.29
PRKN-201ENST00000338468 KCTD17Q8N5Z5 321 aa16.87■□□□□ 0.29
PRKN-201ENST00000338468 SYT2Q8N9I0 419 aaPredicted RBP16.87■□□□□ 0.29
PRKN-201ENST00000338468 POF1BQ8WVV4 589 aa16.87■□□□□ 0.29
PRKN-201ENST00000338468 NT5C3AQ9H0P0 336 aa16.87■□□□□ 0.29
PRKN-201ENST00000338468 ZSCAN16Q9H4T2 348 aaPredicted RBP16.87■□□□□ 0.29
PRKN-201ENST00000338468 NSUN3Q9H649 340 aaKnown RBP16.87■□□□□ 0.29
PRKN-201ENST00000338468 BLOC1S4Q9NUP1 217 aa16.87■□□□□ 0.29
PRKN-201ENST00000338468 HES2Q9Y543 173 aa16.87■□□□□ 0.29
PRKN-201ENST00000338468 IPPQ9Y573 584 aa16.87■□□□□ 0.29
PRKN-201ENST00000338468 PCDHB12Q9Y5F1 795 aa16.87■□□□□ 0.29
PRKN-201ENST00000338468 A0A1B0GUA9 196 aa16.86■□□□□ 0.29
PRKN-201ENST00000338468 SLC26A4O43511 780 aa16.86■□□□□ 0.29
PRKN-201ENST00000338468 HIP1RO75146 1068 aa16.86■□□□□ 0.29
PRKN-201ENST00000338468 CSPG5O95196 566 aa16.86■□□□□ 0.29
PRKN-201ENST00000338468 GUCY2CP25092 1073 aa16.86■□□□□ 0.29
PRKN-201ENST00000338468 MARCKSP29966 332 aaPredicted RBP16.86■□□□□ 0.29
PRKN-201ENST00000338468 CEBPZQ03701 1054 aaKnown RBP16.86■□□□□ 0.29
PRKN-201ENST00000338468 COL19A1Q14993 1142 aa16.86■□□□□ 0.29
PRKN-201ENST00000338468 NOMO2Q5JPE7 1267 aa16.86■□□□□ 0.29
PRKN-201ENST00000338468 GLB1LQ6UWU2 654 aa16.86■□□□□ 0.29
PRKN-201ENST00000338468 ZBTB8OSQ8IWT0 167 aa16.86■□□□□ 0.29
PRKN-201ENST00000338468 PGBD4Q96DM1 585 aa16.86■□□□□ 0.29
PRKN-201ENST00000338468 PRIMPOLQ96LW4 560 aa16.86■□□□□ 0.29
PRKN-201ENST00000338468 C2orf40Q9H1Z8 148 aa16.86■□□□□ 0.29
PRKN-201ENST00000338468 AAASQ9NRG9 546 aa16.86■□□□□ 0.29
PRKN-201ENST00000338468 TBC1D13Q9NVG8 400 aa16.86■□□□□ 0.29
PRKN-201ENST00000338468 PRMT7Q9NVM4 692 aaPredicted RBP16.86■□□□□ 0.29
PRKN-201ENST00000338468 PCDHGC5Q9Y5F6 944 aa16.86■□□□□ 0.29
PRKN-201ENST00000338468 SRPRBQ9Y5M8 271 aaKnown RBP16.86■□□□□ 0.29
PRKN-201ENST00000338468 MORC2Q9Y6X9 1032 aaPredicted RBP16.86■□□□□ 0.29
PRKN-201ENST00000338468 CNTNAP2Q9UHC6 1331 aa16.86■□□□□ 0.29
PRKN-201ENST00000338468 GRXCR2A6NFK2 248 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms