RNA–Protein interactions for RNA: ENST00000338353.3

FAM78B-201, Transcript of family with sequence similarity 78 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM78B, Length 1,597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78B-201ENST00000338353 SNW1Q13573 536 aaKnown RBP27.33■■□□□ 1.97
FAM78B-201ENST00000338353 PCBP1Q15365 356 aaKnown RBP eCLIP27.33■■□□□ 1.97
FAM78B-201ENST00000338353 PDILTQ8N807 584 aa27.33■■□□□ 1.97
FAM78B-201ENST00000338353 CPB2Q96IY4 423 aa27.33■■□□□ 1.97
FAM78B-201ENST00000338353 GUCD1Q96NT3 240 aa27.33■■□□□ 1.97
FAM78B-201ENST00000338353 C2orf40Q9H1Z8 148 aa27.33■■□□□ 1.97
FAM78B-201ENST00000338353 RC3H2Q9HBD1 1191 aaKnown RBP27.33■■□□□ 1.97
FAM78B-201ENST00000338353 RNF216Q9NWF9 866 aaPredicted RBP27.33■■□□□ 1.97
FAM78B-201ENST00000338353 STK17AQ9UEE5 414 aa27.33■■□□□ 1.97
FAM78B-201ENST00000338353 A0A0U1RQF3 1178 aa27.32■■□□□ 1.96
FAM78B-201ENST00000338353 CCDC169A6NNP5 214 aa27.32■■□□□ 1.96
FAM78B-201ENST00000338353 AMHR2Q16671 573 aa27.32■■□□□ 1.96
FAM78B-201ENST00000338353 PAN2Q504Q3 1202 aaKnown RBP27.32■■□□□ 1.96
FAM78B-201ENST00000338353 ZNF689Q96CS4 500 aaPredicted RBP27.32■■□□□ 1.96
FAM78B-201ENST00000338353 ELAC1Q9H777 363 aaKnown RBP27.32■■□□□ 1.96
FAM78B-201ENST00000338353 MTUS1Q9ULD2 1270 aa27.32■■□□□ 1.96
FAM78B-201ENST00000338353 ADGRA3Q8IWK6 1321 aa27.32■■□□□ 1.96
FAM78B-201ENST00000338353 B4GALT5O43286 388 aa27.31■■□□□ 1.96
FAM78B-201ENST00000338353 FGFR1P11362 822 aa27.31■■□□□ 1.96
FAM78B-201ENST00000338353 STAT6P42226 847 aa27.31■■□□□ 1.96
FAM78B-201ENST00000338353 NPTX2P47972 431 aa27.31■■□□□ 1.96
FAM78B-201ENST00000338353 NCBP1Q09161 790 aaKnown RBP27.31■■□□□ 1.96
FAM78B-201ENST00000338353 DMP1Q13316 513 aaPredicted RBP27.31■■□□□ 1.96
FAM78B-201ENST00000338353 BTG3Q14201 252 aaPredicted RBP27.31■■□□□ 1.96
FAM78B-201ENST00000338353 NAALADL2Q58DX5 795 aa27.31■■□□□ 1.96
FAM78B-201ENST00000338353 PRDM12Q9H4Q4 367 aa27.31■■□□□ 1.96
FAM78B-201ENST00000338353 COL4A6Q14031 1691 aa27.31■■□□□ 1.96
FAM78B-201ENST00000338353 KRT18P05783 430 aaKnown RBP27.31■■□□□ 1.96
FAM78B-201ENST00000338353 FIBCD1Q8N539 461 aa27.31■■□□□ 1.96
FAM78B-201ENST00000338353 ARNTL2Q8WYA1 636 aa27.31■■□□□ 1.96
FAM78B-201ENST00000338353 CDX2Q99626 313 aaPredicted RBP27.31■■□□□ 1.96
FAM78B-201ENST00000338353 REEP2Q9BRK0 252 aa27.31■■□□□ 1.96
FAM78B-201ENST00000338353 PYM1Q9BRP8 204 aaKnown RBP27.31■■□□□ 1.96
FAM78B-201ENST00000338353 FAM105AQ9NUU6 356 aa27.31■■□□□ 1.96
FAM78B-201ENST00000338353 PRMT7Q9NVM4 692 aaPredicted RBP27.31■■□□□ 1.96
FAM78B-201ENST00000338353 CDH23Q9H251 3354 aa27.3■■□□□ 1.96
FAM78B-201ENST00000338353 ZNF202O95125 648 aa27.3■■□□□ 1.96
FAM78B-201ENST00000338353 ARF4P18085 180 aaPredicted RBP27.3■■□□□ 1.96
FAM78B-201ENST00000338353 AXLP30530 894 aa27.3■■□□□ 1.96
FAM78B-201ENST00000338353 MAPK6Q16659 721 aa27.3■■□□□ 1.96
FAM78B-201ENST00000338353 CAVIN1Q6NZI2 390 aaKnown RBP27.3■■□□□ 1.96
FAM78B-201ENST00000338353 NOTUMQ6P988 496 aa27.3■■□□□ 1.96
FAM78B-201ENST00000338353 SYAP1Q96A49 352 aaPredicted RBP27.3■■□□□ 1.96
FAM78B-201ENST00000338353 TGS1Q96RS0 853 aaKnown RBP27.3■■□□□ 1.96
FAM78B-201ENST00000338353 TRAIPQ9BWF2 469 aa27.3■■□□□ 1.96
FAM78B-201ENST00000338353 KMT5AQ9NQR1 393 aa27.3■■□□□ 1.96
FAM78B-201ENST00000338353 FNDC1Q4ZHG4 1894 aaPredicted RBP27.29■■□□□ 1.96
FAM78B-201ENST00000338353 KINO60870 393 aaKnown RBP27.29■■□□□ 1.96
FAM78B-201ENST00000338353 PRKCBP05771 671 aa27.29■■□□□ 1.96
FAM78B-201ENST00000338353 ATF7P17544 494 aaPredicted RBP27.29■■□□□ 1.96
FAM78B-201ENST00000338353 LONRF3Q496Y0 759 aa27.29■■□□□ 1.96
FAM78B-201ENST00000338353 C17orf80Q9BSJ5 609 aa27.29■■□□□ 1.96
FAM78B-201ENST00000338353 CCDC113Q9H0I3 377 aa27.29■■□□□ 1.96
FAM78B-201ENST00000338353 FZD8Q9H461 694 aa27.29■■□□□ 1.96
FAM78B-201ENST00000338353 C17orf75Q9HAS0 396 aa27.29■■□□□ 1.96
FAM78B-201ENST00000338353 TBKBP1A7MCY6 615 aa27.28■■□□□ 1.96
FAM78B-201ENST00000338353 POLR2DO15514 142 aaKnown RBP27.28■■□□□ 1.96
FAM78B-201ENST00000338353 PLS3P13797 630 aa27.28■■□□□ 1.96
FAM78B-201ENST00000338353 EFNA5P52803 228 aa27.28■■□□□ 1.96
FAM78B-201ENST00000338353 UBXN11Q5T124 520 aa27.28■■□□□ 1.96
FAM78B-201ENST00000338353 PPP4R3CPQ6ZMV5 832 aa27.28■■□□□ 1.96
FAM78B-201ENST00000338353 SV2BQ7L1I2 683 aa27.28■■□□□ 1.96
FAM78B-201ENST00000338353 ZNF598Q86UK7 904 aaKnown RBP27.28■■□□□ 1.96
FAM78B-201ENST00000338353 CDR2LQ86X02 465 aaPredicted RBP27.28■■□□□ 1.96
FAM78B-201ENST00000338353 CMTR2Q8IYT2 770 aaKnown RBP27.28■■□□□ 1.96
FAM78B-201ENST00000338353 MYLIPQ8WY64 445 aa27.28■■□□□ 1.96
FAM78B-201ENST00000338353 TIGD1Q96MW7 591 aa27.28■■□□□ 1.96
FAM78B-201ENST00000338353 TMEM63CQ9P1W3 806 aa27.28■■□□□ 1.96
FAM78B-201ENST00000338353 ODF2LQ9ULJ1 636 aa27.28■■□□□ 1.96
FAM78B-201ENST00000338353 USP20Q9Y2K6 914 aa27.28■■□□□ 1.96
FAM78B-201ENST00000338353 PCDHB2Q9Y5E7 798 aa27.28■■□□□ 1.96
FAM78B-201ENST00000338353 EPOPA6NHQ4 379 aa27.27■■□□□ 1.96
FAM78B-201ENST00000338353 SLC16A4O15374 487 aa27.27■■□□□ 1.96
FAM78B-201ENST00000338353 EOMESO95936 686 aa27.27■■□□□ 1.96
FAM78B-201ENST00000338353 SKIP12755 728 aa27.27■■□□□ 1.96
FAM78B-201ENST00000338353 RAB27AP51159 221 aa27.27■■□□□ 1.96
FAM78B-201ENST00000338353 ERVK-21P61565 698 aa27.27■■□□□ 1.96
FAM78B-201ENST00000338353 GIT2Q14161 759 aa27.27■■□□□ 1.96
FAM78B-201ENST00000338353 FAM187BQ17R55 369 aa27.27■■□□□ 1.96
FAM78B-201ENST00000338353 TMEM132AQ24JP5 1023 aa27.27■■□□□ 1.96
FAM78B-201ENST00000338353 LPPQ93052 612 aa27.27■■□□□ 1.96
FAM78B-201ENST00000338353 PRIMPOLQ96LW4 560 aa27.27■■□□□ 1.96
FAM78B-201ENST00000338353 EIF2AQ9BY44 585 aaKnown RBP27.27■■□□□ 1.96
FAM78B-201ENST00000338353 RNF19AQ9NV58 838 aa27.27■■□□□ 1.96
FAM78B-201ENST00000338353 NLRC5Q86WI3 1866 aa27.27■■□□□ 1.96
FAM78B-201ENST00000338353 TTLL13PA6NNM8 815 aa27.26■■□□□ 1.96
FAM78B-201ENST00000338353 RFXAPO00287 272 aa27.26■■□□□ 1.96
FAM78B-201ENST00000338353 FAM13AO94988 1023 aa27.26■■□□□ 1.96
FAM78B-201ENST00000338353 PRPF4BQ13523 1007 aaKnown RBP27.26■■□□□ 1.96
FAM78B-201ENST00000338353 CCDC183Q5T5S1 534 aa27.26■■□□□ 1.96
FAM78B-201ENST00000338353 CLSTN2Q9H4D0 955 aa27.26■■□□□ 1.96
FAM78B-201ENST00000338353 ZHX3Q9H4I2 956 aa27.26■■□□□ 1.96
FAM78B-201ENST00000338353 USP25Q9UHP3 1055 aa27.26■■□□□ 1.96
FAM78B-201ENST00000338353 K7ERI5 159 aa27.26■■□□□ 1.95
FAM78B-201ENST00000338353 HOXA2O43364 376 aa27.26■■□□□ 1.95
FAM78B-201ENST00000338353 EDN1P05305 212 aa27.26■■□□□ 1.95
FAM78B-201ENST00000338353 DYMQ7RTS9 669 aa27.26■■□□□ 1.95
FAM78B-201ENST00000338353 ABI1Q8IZP0 508 aa27.26■■□□□ 1.95
FAM78B-201ENST00000338353 DHX58Q96C10 678 aa27.26■■□□□ 1.95
FAM78B-201ENST00000338353 CCDC51Q96ER9 411 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms