RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 KCNB2Q92953 911 aa12.88□□□□□ -0.35
CSMD2-202ENST00000338325 FAM193BQ96PV7 902 aaPredicted RBP12.88□□□□□ -0.35
CSMD2-202ENST00000338325 AGXT2Q9BYV1 514 aa12.88□□□□□ -0.35
CSMD2-202ENST00000338325 RSAD1Q9HA92 442 aa12.88□□□□□ -0.35
CSMD2-202ENST00000338325 IFT122Q9HBG6 1241 aa12.88□□□□□ -0.35
CSMD2-202ENST00000338325 IGSF9Q9P2J2 1179 aa12.88□□□□□ -0.35
CSMD2-202ENST00000338325 KANSL3Q9P2N6 904 aa12.88□□□□□ -0.35
CSMD2-202ENST00000338325 FAN1Q9Y2M0 1017 aa12.88□□□□□ -0.35
CSMD2-202ENST00000338325 COL4A3BPQ9Y5P4 624 aa12.88□□□□□ -0.35
CSMD2-202ENST00000338325 DOCK8Q8NF50 2099 aa12.88□□□□□ -0.35
CSMD2-202ENST00000338325 ALDH2P05091 517 aa12.88□□□□□ -0.35
CSMD2-202ENST00000338325 URODP06132 367 aa12.88□□□□□ -0.35
CSMD2-202ENST00000338325 PSMC5P62195 406 aa12.88□□□□□ -0.35
CSMD2-202ENST00000338325 PLA2G4FQ68DD2 849 aa12.88□□□□□ -0.35
CSMD2-202ENST00000338325 ANO5Q75V66 913 aa12.88□□□□□ -0.35
CSMD2-202ENST00000338325 ERMP1Q7Z2K6 904 aa12.88□□□□□ -0.35
CSMD2-202ENST00000338325 MRPL10Q7Z7H8 261 aaKnown RBP12.88□□□□□ -0.35
CSMD2-202ENST00000338325 ETNPPLQ8TBG4 499 aa12.88□□□□□ -0.35
CSMD2-202ENST00000338325 MBOAT7Q96N66 472 aa12.88□□□□□ -0.35
CSMD2-202ENST00000338325 HERC2P3Q9BVR0 1158 aa12.88□□□□□ -0.35
CSMD2-202ENST00000338325 MAN1C1Q9NR34 630 aa12.88□□□□□ -0.35
CSMD2-202ENST00000338325 PCDHA4Q9UN74 947 aa12.88□□□□□ -0.35
CSMD2-202ENST00000338325 NRP1O14786 923 aa12.87□□□□□ -0.35
CSMD2-202ENST00000338325 SOD2P04179 222 aa12.87□□□□□ -0.35
CSMD2-202ENST00000338325 ADH1AP07327 375 aa12.87□□□□□ -0.35
CSMD2-202ENST00000338325 RPS6KB1P23443 525 aa12.87□□□□□ -0.35
CSMD2-202ENST00000338325 ID4P47928 161 aa12.87□□□□□ -0.35
CSMD2-202ENST00000338325 AFF1P51825 1210 aaKnown RBP12.87□□□□□ -0.35
CSMD2-202ENST00000338325 ELMSAN1Q6PJG2 1045 aa12.87□□□□□ -0.35
CSMD2-202ENST00000338325 MOXD1Q6UVY6 613 aa12.87□□□□□ -0.35
CSMD2-202ENST00000338325 SRGAP1Q7Z6B7 1085 aa12.87□□□□□ -0.35
CSMD2-202ENST00000338325 SLC7A3Q8WY07 619 aa12.87□□□□□ -0.35
CSMD2-202ENST00000338325 STAMQ92783 540 aa12.87□□□□□ -0.35
CSMD2-202ENST00000338325 NCOA5Q9HCD5 579 aaKnown RBP12.87□□□□□ -0.35
CSMD2-202ENST00000338325 SSX2IPQ9Y2D8 614 aa12.87□□□□□ -0.35
CSMD2-202ENST00000338325 SNX14Q9Y5W7 946 aa12.87□□□□□ -0.35
CSMD2-202ENST00000338325 DCHS1Q96JQ0 3298 aa12.86□□□□□ -0.35
CSMD2-202ENST00000338325 C2CD2LO14523 706 aa12.86□□□□□ -0.35
CSMD2-202ENST00000338325 NARSO43776 548 aaKnown RBP12.86□□□□□ -0.35
CSMD2-202ENST00000338325 N4BP1O75113 896 aaKnown RBP12.86□□□□□ -0.35
CSMD2-202ENST00000338325 POMCP01189 267 aa12.86□□□□□ -0.35
CSMD2-202ENST00000338325 PDIA3P30101 505 aaKnown RBP12.86□□□□□ -0.35
CSMD2-202ENST00000338325 GBP2P32456 591 aaPredicted RBP12.86□□□□□ -0.35
CSMD2-202ENST00000338325 AK2P54819 239 aa12.86□□□□□ -0.35
CSMD2-202ENST00000338325 CCT2P78371 535 aaKnown RBP12.86□□□□□ -0.35
CSMD2-202ENST00000338325 NONOQ15233 471 aaKnown RBP eCLIP12.86□□□□□ -0.35
CSMD2-202ENST00000338325 UBXN11Q5T124 520 aa12.86□□□□□ -0.35
CSMD2-202ENST00000338325 CYP26C1Q6V0L0 522 aa12.86□□□□□ -0.35
CSMD2-202ENST00000338325 SKAP1Q86WV1 359 aa12.86□□□□□ -0.35
CSMD2-202ENST00000338325 EXOC8Q8IYI6 725 aa12.86□□□□□ -0.35
CSMD2-202ENST00000338325 TRIM22Q8IYM9 498 aa12.86□□□□□ -0.35
CSMD2-202ENST00000338325 RPS6KC1Q96S38 1066 aa12.86□□□□□ -0.35
CSMD2-202ENST00000338325 RHOBTB2Q9BYZ6 727 aa12.86□□□□□ -0.35
CSMD2-202ENST00000338325 WDR6Q9NNW5 1121 aaKnown RBP12.86□□□□□ -0.35
CSMD2-202ENST00000338325 MARCH5Q9NX47 278 aa12.86□□□□□ -0.35
CSMD2-202ENST00000338325 WNT16Q9UBV4 365 aa12.86□□□□□ -0.35
CSMD2-202ENST00000338325 DDX25Q9UHL0 483 aaKnown RBP12.86□□□□□ -0.35
CSMD2-202ENST00000338325 DPP7Q9UHL4 492 aa12.86□□□□□ -0.35
CSMD2-202ENST00000338325 PPME1Q9Y570 386 aa12.86□□□□□ -0.35
CSMD2-202ENST00000338325 CLUHO75153 1309 aa12.86□□□□□ -0.35
CSMD2-202ENST00000338325 CCDC195A0A1B0GUA6 201 aa12.85□□□□□ -0.35
CSMD2-202ENST00000338325 M0R2N6 131 aa12.85□□□□□ -0.35
CSMD2-202ENST00000338325 INPPL1O15357 1258 aa12.85□□□□□ -0.35
CSMD2-202ENST00000338325 DKC1O60832 514 aaKnown RBP eCLIP12.85□□□□□ -0.35
CSMD2-202ENST00000338325 GLUD1P00367 558 aa12.85□□□□□ -0.35
CSMD2-202ENST00000338325 CFHP08603 1231 aa12.85□□□□□ -0.35
CSMD2-202ENST00000338325 NCLP19338 710 aaKnown RBP12.85□□□□□ -0.35
CSMD2-202ENST00000338325 HOXA11P31270 313 aaPredicted RBP12.85□□□□□ -0.35
CSMD2-202ENST00000338325 HSPA4P34932 840 aa12.85□□□□□ -0.35
CSMD2-202ENST00000338325 QARSP47897 775 aaKnown RBP12.85□□□□□ -0.35
CSMD2-202ENST00000338325 GLUD2P49448 558 aa12.85□□□□□ -0.35
CSMD2-202ENST00000338325 NPEPPSP55786 919 aa12.85□□□□□ -0.35
CSMD2-202ENST00000338325 BLIDQ8IZY5 108 aa12.85□□□□□ -0.35
CSMD2-202ENST00000338325 DAGLBQ8NCG7 672 aa12.85□□□□□ -0.35
CSMD2-202ENST00000338325 CNNM3Q8NE01 707 aa12.85□□□□□ -0.35
CSMD2-202ENST00000338325 PRPF31Q8WWY3 499 aaKnown RBP12.85□□□□□ -0.35
CSMD2-202ENST00000338325 PSPC1Q8WXF1 523 aaKnown RBP12.85□□□□□ -0.35
CSMD2-202ENST00000338325 RSAD2Q8WXG1 361 aa12.85□□□□□ -0.35
CSMD2-202ENST00000338325 DHX33Q9H6R0 707 aaKnown RBP12.85□□□□□ -0.35
CSMD2-202ENST00000338325 MINDY3Q9H8M7 445 aa12.85□□□□□ -0.35
CSMD2-202ENST00000338325 UBN1Q9NPG3 1134 aa12.85□□□□□ -0.35
CSMD2-202ENST00000338325 EPS15L1Q9UBC2 864 aa12.85□□□□□ -0.35
CSMD2-202ENST00000338325 PRG3Q9Y2Y8 225 aaPredicted RBP12.85□□□□□ -0.35
CSMD2-202ENST00000338325 FANCMQ8IYD8 2048 aa12.85□□□□□ -0.35
CSMD2-202ENST00000338325 GVINP1Q7Z2Y8 2422 aa12.85□□□□□ -0.35
CSMD2-202ENST00000338325 KRBA1A5PL33 1030 aa12.84□□□□□ -0.35
CSMD2-202ENST00000338325 EML1O00423 815 aa12.84□□□□□ -0.35
CSMD2-202ENST00000338325 STK25O00506 426 aa12.84□□□□□ -0.35
CSMD2-202ENST00000338325 TEX28O15482 410 aa12.84□□□□□ -0.35
CSMD2-202ENST00000338325 SLC37A4O43826 429 aa12.84□□□□□ -0.35
CSMD2-202ENST00000338325 SRGAP2CP0DJJ0 459 aa12.84□□□□□ -0.35
CSMD2-202ENST00000338325 ITGA4P13612 1032 aa12.84□□□□□ -0.35
CSMD2-202ENST00000338325 RFX1P22670 979 aa12.84□□□□□ -0.35
CSMD2-202ENST00000338325 RFC5P40937 340 aa12.84□□□□□ -0.35
CSMD2-202ENST00000338325 OR1G1P47890 313 aa12.84□□□□□ -0.35
CSMD2-202ENST00000338325 EVCP57679 992 aa12.84□□□□□ -0.35
CSMD2-202ENST00000338325 SSRP1Q08945 709 aaKnown RBP12.84□□□□□ -0.35
CSMD2-202ENST00000338325 LAMTOR4Q0VGL1 99 aa12.84□□□□□ -0.35
CSMD2-202ENST00000338325 PPP2R5CQ13362 524 aa12.84□□□□□ -0.35
CSMD2-202ENST00000338325 TAS1R1Q7RTX1 841 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms