RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 EHMT1Q9H9B1 1298 aa14.13□□□□□ -0.15
COL2A1-201ENST00000337299 EME2A4GXA9 379 aaPredicted RBP14.13□□□□□ -0.15
COL2A1-201ENST00000337299 H3BRJ5 948 aa14.13□□□□□ -0.15
COL2A1-201ENST00000337299 EPHB6O15197 1021 aa14.13□□□□□ -0.15
COL2A1-201ENST00000337299 ETS2P15036 469 aa14.13□□□□□ -0.15
COL2A1-201ENST00000337299 TNNI1P19237 187 aa14.13□□□□□ -0.15
COL2A1-201ENST00000337299 ATXN3P54252 364 aaPredicted RBP14.13□□□□□ -0.15
COL2A1-201ENST00000337299 ROR2Q01974 943 aaKnown RBP14.13□□□□□ -0.15
COL2A1-201ENST00000337299 IZUMO3Q5VZ72 239 aa14.13□□□□□ -0.15
COL2A1-201ENST00000337299 DPP8Q6V1X1 898 aaPredicted RBP14.13□□□□□ -0.15
COL2A1-201ENST00000337299 OPTNQ96CV9 577 aa14.13□□□□□ -0.15
COL2A1-201ENST00000337299 CNOT8Q9UFF9 292 aaKnown RBP14.13□□□□□ -0.15
COL2A1-201ENST00000337299 SCINQ9Y6U3 715 aa14.13□□□□□ -0.15
COL2A1-201ENST00000337299 NRXN1Q9ULB1 1477 aa14.13□□□□□ -0.15
COL2A1-201ENST00000337299 ANKMY2Q8IV38 441 aa14.13□□□□□ -0.15
COL2A1-201ENST00000337299 RAD54LQ92698 747 aa14.13□□□□□ -0.15
COL2A1-201ENST00000337299 OSGEPQ9NPF4 335 aa14.13□□□□□ -0.15
COL2A1-201ENST00000337299 NAGPAQ9UK23 515 aa14.13□□□□□ -0.15
COL2A1-201ENST00000337299 NRKQ7Z2Y5 1582 aa14.13□□□□□ -0.15
COL2A1-201ENST00000337299 ENTPD5O75356 428 aa14.12□□□□□ -0.15
COL2A1-201ENST00000337299 NR3C1P04150 777 aa14.12□□□□□ -0.15
COL2A1-201ENST00000337299 SAT1P21673 171 aa14.12□□□□□ -0.15
COL2A1-201ENST00000337299 MEI1Q5TIA1 1274 aa14.12□□□□□ -0.15
COL2A1-201ENST00000337299 LCA5Q86VQ0 697 aa14.12□□□□□ -0.15
COL2A1-201ENST00000337299 TPCN2Q8NHX9 752 aa14.12□□□□□ -0.15
COL2A1-201ENST00000337299 MTBPQ96DY7 904 aa14.12□□□□□ -0.15
COL2A1-201ENST00000337299 ZMAT2Q96NC0 199 aaKnown RBP14.12□□□□□ -0.15
COL2A1-201ENST00000337299 SHCBP1LQ9BZQ2 653 aa14.12□□□□□ -0.15
COL2A1-201ENST00000337299 MRPL46Q9H2W6 279 aaKnown RBP14.12□□□□□ -0.15
COL2A1-201ENST00000337299 CORO1CQ9ULV4 474 aaPredicted RBP14.12□□□□□ -0.15
COL2A1-201ENST00000337299 NOP56O00567 594 aaKnown RBP14.12□□□□□ -0.15
COL2A1-201ENST00000337299 ASAP2O43150 1006 aa14.12□□□□□ -0.15
COL2A1-201ENST00000337299 ATMINO43313 823 aaPredicted RBP14.12□□□□□ -0.15
COL2A1-201ENST00000337299 AHCYL1O43865 530 aa14.12□□□□□ -0.15
COL2A1-201ENST00000337299 PIK3CAP42336 1068 aa14.12□□□□□ -0.15
COL2A1-201ENST00000337299 USP4Q13107 963 aa14.12□□□□□ -0.15
COL2A1-201ENST00000337299 XRCC4Q13426 336 aa14.12□□□□□ -0.15
COL2A1-201ENST00000337299 GEN1Q17RS7 908 aa14.12□□□□□ -0.15
COL2A1-201ENST00000337299 DCLRE1BQ9H816 532 aa14.12□□□□□ -0.15
COL2A1-201ENST00000337299 PHTF1Q9UMS5 762 aa14.12□□□□□ -0.15
COL2A1-201ENST00000337299 HMGB2P26583 209 aaKnown RBP14.12□□□□□ -0.15
COL2A1-201ENST00000337299 SCNN1DP51172 638 aa14.12□□□□□ -0.15
COL2A1-201ENST00000337299 GPC5P78333 572 aa14.12□□□□□ -0.15
COL2A1-201ENST00000337299 ICA1LQ8NDH6 482 aa14.12□□□□□ -0.15
COL2A1-201ENST00000337299 ZNF507Q8TCN5 953 aa14.12□□□□□ -0.15
COL2A1-201ENST00000337299 DDX18Q9NVP1 670 aaKnown RBP14.12□□□□□ -0.15
COL2A1-201ENST00000337299 GOLGA8IPA6NC78 632 aa14.12□□□□□ -0.15
COL2A1-201ENST00000337299 GOLGA8JA6NMD2 632 aa14.12□□□□□ -0.15
COL2A1-201ENST00000337299 FAM200BP0CF97 657 aa14.12□□□□□ -0.15
COL2A1-201ENST00000337299 ALDH18A1P54886 795 aaKnown RBP14.12□□□□□ -0.15
COL2A1-201ENST00000337299 UBXN2AP68543 259 aa14.12□□□□□ -0.15
COL2A1-201ENST00000337299 CCDC92Q53HC0 331 aaPredicted RBP14.12□□□□□ -0.15
COL2A1-201ENST00000337299 RNF220Q5VTB9 566 aa14.12□□□□□ -0.15
COL2A1-201ENST00000337299 CRELD2Q6UXH1 353 aaPredicted RBP14.12□□□□□ -0.15
COL2A1-201ENST00000337299 COL23A1Q86Y22 540 aaPredicted RBP14.12□□□□□ -0.15
COL2A1-201ENST00000337299 NAP1L4Q99733 375 aaKnown RBP14.12□□□□□ -0.15
COL2A1-201ENST00000337299 RXFP1Q9HBX9 757 aa14.12□□□□□ -0.15
COL2A1-201ENST00000337299 DPPA5A6NC42 116 aa14.11□□□□□ -0.15
COL2A1-201ENST00000337299 LRRC10BA6NIK2 292 aa14.11□□□□□ -0.15
COL2A1-201ENST00000337299 C21orf2O43822 256 aa14.11□□□□□ -0.15
COL2A1-201ENST00000337299 PHF2O75151 1096 aa14.11□□□□□ -0.15
COL2A1-201ENST00000337299 CALB2P22676 271 aa14.11□□□□□ -0.15
COL2A1-201ENST00000337299 FLT3P36888 993 aa14.11□□□□□ -0.15
COL2A1-201ENST00000337299 CENPUQ71F23 418 aa14.11□□□□□ -0.15
COL2A1-201ENST00000337299 CCDC125Q86Z20 511 aa14.11□□□□□ -0.15
COL2A1-201ENST00000337299 ATP2A3Q93084 1043 aa14.11□□□□□ -0.15
COL2A1-201ENST00000337299 MKNK1Q9BUB5 465 aa14.11□□□□□ -0.15
COL2A1-201ENST00000337299 SEMA6BQ9H3T3 888 aa14.11□□□□□ -0.15
COL2A1-201ENST00000337299 ALG6Q9Y672 507 aa14.11□□□□□ -0.15
COL2A1-201ENST00000337299 POTEFA5A3E0 1075 aa14.11□□□□□ -0.15
COL2A1-201ENST00000337299 POTEIP0CG38 1075 aa14.11□□□□□ -0.15
COL2A1-201ENST00000337299 ACADSP16219 412 aa14.11□□□□□ -0.15
COL2A1-201ENST00000337299 ZYXQ15942 572 aaKnown RBP14.11□□□□□ -0.15
COL2A1-201ENST00000337299 SYCP2LQ5T4T6 812 aa14.11□□□□□ -0.15
COL2A1-201ENST00000337299 ERMARDQ5T6L9 678 aa14.11□□□□□ -0.15
COL2A1-201ENST00000337299 POTEGQ6S5H5 508 aa14.11□□□□□ -0.15
COL2A1-201ENST00000337299 POTEEQ6S8J3 1075 aa14.11□□□□□ -0.15
COL2A1-201ENST00000337299 SLC13A1Q9BZW2 595 aa14.11□□□□□ -0.15
COL2A1-201ENST00000337299 PDP2Q9P2J9 529 aa14.11□□□□□ -0.15
COL2A1-201ENST00000337299 FRMPD1Q5SYB0 1578 aa14.11□□□□□ -0.15
COL2A1-201ENST00000337299 SNX3O60493 162 aa14.11□□□□□ -0.15
COL2A1-201ENST00000337299 GCLMP48507 274 aa14.11□□□□□ -0.15
COL2A1-201ENST00000337299 PDIA2Q13087 525 aaKnown RBP14.11□□□□□ -0.15
COL2A1-201ENST00000337299 MAPK7Q13164 816 aa14.11□□□□□ -0.15
COL2A1-201ENST00000337299 TTLL12Q14166 644 aaPredicted RBP14.11□□□□□ -0.15
COL2A1-201ENST00000337299 MEA1Q16626 185 aa14.11□□□□□ -0.15
COL2A1-201ENST00000337299 TAF1BQ53T94 588 aaPredicted RBP14.11□□□□□ -0.15
COL2A1-201ENST00000337299 C16orf87Q6PH81 154 aa14.11□□□□□ -0.15
COL2A1-201ENST00000337299 IZUMO2Q6UXV1 221 aa14.11□□□□□ -0.15
COL2A1-201ENST00000337299 NLRP9Q7RTR0 991 aa14.11□□□□□ -0.15
COL2A1-201ENST00000337299 MTDHQ86UE4 582 aaKnown RBP14.11□□□□□ -0.15
COL2A1-201ENST00000337299 ZNF564Q8TBZ8 553 aaPredicted RBP14.11□□□□□ -0.15
COL2A1-201ENST00000337299 ZNF483Q8TF39 744 aaPredicted RBP14.11□□□□□ -0.15
COL2A1-201ENST00000337299 STK32AQ8WU08 396 aa14.11□□□□□ -0.15
COL2A1-201ENST00000337299 NUP85Q9BW27 656 aa14.11□□□□□ -0.15
COL2A1-201ENST00000337299 DIS3Q9Y2L1 958 aaKnown RBP14.11□□□□□ -0.15
COL2A1-201ENST00000337299 KRT1P04264 644 aa14.1□□□□□ -0.15
COL2A1-201ENST00000337299 ALX1Q15699 326 aa14.1□□□□□ -0.15
COL2A1-201ENST00000337299 TMEM259Q4ZIN3 620 aa14.1□□□□□ -0.15
COL2A1-201ENST00000337299 SNF8Q96H20 258 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms