RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 TRPC3Q13507 836 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 BAATQ14032 418 aaPredicted RBP8.85□□□□□ -0.99
HPS4-201ENST00000336873 TTMPQ5BVD1 217 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 DEFB132Q7Z7B7 95 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 SLC47A2Q86VL8 602 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 RNF10Q8N5U6 811 aaKnown RBP8.85□□□□□ -0.99
HPS4-201ENST00000336873 SYT2Q8N9I0 419 aaPredicted RBP8.85□□□□□ -0.99
HPS4-201ENST00000336873 CCDC63Q8NA47 563 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 TPCN2Q8NHX9 752 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 RBM46Q8TBY0 533 aaKnown RBP8.85□□□□□ -0.99
HPS4-201ENST00000336873 SLC35C1Q96A29 364 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 NLRP4Q96MN2 994 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 INO80BQ9C086 356 aaPredicted RBP8.85□□□□□ -0.99
HPS4-201ENST00000336873 ZWILCHQ9H900 591 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 FAM198AQ9UFP1 575 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 PCSK1NQ9UHG2 260 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 BZW2Q9Y6E2 419 aaKnown RBP8.85□□□□□ -0.99
HPS4-201ENST00000336873 ATRNO75882 1429 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 DCDC2CA8MYV0 355 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 NOP56O00567 594 aaKnown RBP8.85□□□□□ -0.99
HPS4-201ENST00000336873 SLITRK3O94933 977 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 EYA4O95677 639 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 PPATQ06203 517 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 TMED2Q15363 201 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 RNF207Q6ZRF8 634 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 VSIG1Q86XK7 387 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 KIFAP3Q92845 792 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 ATP6V1G3Q96LB4 118 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 FAM20AQ96MK3 541 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 KLF6Q99612 283 aaPredicted RBP8.85□□□□□ -0.99
HPS4-201ENST00000336873 AGPAT3Q9NRZ7 376 aa8.85□□□□□ -0.99
HPS4-201ENST00000336873 AJAP1Q9UKB5 411 aaPredicted RBP8.85□□□□□ -0.99
HPS4-201ENST00000336873 MYH7P12883 1935 aa8.84□□□□□ -0.99
HPS4-201ENST00000336873 POLRMTO00411 1230 aaKnown RBP8.84□□□□□ -0.99
HPS4-201ENST00000336873 PDXKO00764 312 aa8.84□□□□□ -0.99
HPS4-201ENST00000336873 PPP1R37O75864 691 aa8.84□□□□□ -0.99
HPS4-201ENST00000336873 FGRP09769 529 aa8.84□□□□□ -0.99
HPS4-201ENST00000336873 PSMC4P43686 418 aa8.84□□□□□ -0.99
HPS4-201ENST00000336873 RPS6P62753 249 aaKnown RBP8.84□□□□□ -0.99
HPS4-201ENST00000336873 JAG1P78504 1218 aa8.84□□□□□ -0.99
HPS4-201ENST00000336873 AP3B2Q13367 1082 aa8.84□□□□□ -0.99
HPS4-201ENST00000336873 KYNUQ16719 465 aa8.84□□□□□ -0.99
HPS4-201ENST00000336873 Q3C1V9 767 aa8.84□□□□□ -0.99
HPS4-201ENST00000336873 CCDC91Q7Z6B0 441 aa8.84□□□□□ -0.99
HPS4-201ENST00000336873 NLRP14Q86W24 1093 aa8.84□□□□□ -0.99
HPS4-201ENST00000336873 ZNF564Q8TBZ8 553 aaPredicted RBP8.84□□□□□ -0.99
HPS4-201ENST00000336873 NAP1L3Q99457 506 aaPredicted RBP8.84□□□□□ -0.99
HPS4-201ENST00000336873 DNAJC18Q9H819 358 aa8.84□□□□□ -0.99
HPS4-201ENST00000336873 C10orf88Q9H8K7 445 aa8.84□□□□□ -0.99
HPS4-201ENST00000336873 IKBKGQ9Y6K9 419 aa8.84□□□□□ -0.99
HPS4-201ENST00000336873 LRRD1A4D1F6 860 aa8.84□□□□□ -0.99
HPS4-201ENST00000336873 RASGRF2O14827 1237 aa8.84□□□□□ -0.99
HPS4-201ENST00000336873 EIF3HO15372 352 aaKnown RBP eCLIP8.84□□□□□ -0.998e-6■□□□□ 10.6
HPS4-201ENST00000336873 NOL4O94818 638 aa8.84□□□□□ -0.99
HPS4-201ENST00000336873 IL1R1P14778 569 aa8.84□□□□□ -0.99
HPS4-201ENST00000336873 YWHABP31946 246 aaKnown RBP8.84□□□□□ -0.99
HPS4-201ENST00000336873 BFSP1Q12934 665 aa8.84□□□□□ -0.99
HPS4-201ENST00000336873 SNRNP48Q6IEG0 339 aaKnown RBP8.84□□□□□ -0.99
HPS4-201ENST00000336873 ZNF449Q6P9G9 518 aa8.84□□□□□ -0.99
HPS4-201ENST00000336873 DLK2Q6UY11 383 aa8.84□□□□□ -0.99
HPS4-201ENST00000336873 RFX8Q6ZV50 586 aa8.84□□□□□ -0.99
HPS4-201ENST00000336873 SULF1Q8IWU6 871 aa8.84□□□□□ -0.99
HPS4-201ENST00000336873 IL31RAQ8NI17 732 aa8.84□□□□□ -0.99
HPS4-201ENST00000336873 NEK9Q8TD19 979 aa8.84□□□□□ -0.99
HPS4-201ENST00000336873 APOL6Q9BWW8 343 aa8.84□□□□□ -0.99
HPS4-201ENST00000336873 NKIRAS1Q9NYS0 192 aa8.84□□□□□ -0.99
HPS4-201ENST00000336873 HSPBP1Q9NZL4 362 aa8.84□□□□□ -0.99
HPS4-201ENST00000336873 APEX2Q9UBZ4 518 aa8.84□□□□□ -0.99
HPS4-201ENST00000336873 CAND2O75155 1236 aa8.84□□□□□ -1
HPS4-201ENST00000336873 MAGEA9P43362 315 aa8.84□□□□□ -1
HPS4-201ENST00000336873 SMTNL2Q2TAL5 461 aa8.84□□□□□ -1
HPS4-201ENST00000336873 BRDTQ58F21 947 aaPredicted RBP8.84□□□□□ -1
HPS4-201ENST00000336873 TRIM68Q6AZZ1 485 aa8.84□□□□□ -1
HPS4-201ENST00000336873 CCDC13Q8IYE1 715 aa8.84□□□□□ -1
HPS4-201ENST00000336873 KIF2BQ8N4N8 673 aa8.84□□□□□ -1
HPS4-201ENST00000336873 EPS8L3Q8TE67 593 aaKnown RBP8.84□□□□□ -1
HPS4-201ENST00000336873 DCAF4Q8WV16 495 aa8.84□□□□□ -1
HPS4-201ENST00000336873 ACCSQ96QU6 501 aa8.84□□□□□ -1
HPS4-201ENST00000336873 WRNIP1Q96S55 665 aa8.84□□□□□ -1
HPS4-201ENST00000336873 PRMT1Q99873 361 aaKnown RBP8.84□□□□□ -1
HPS4-201ENST00000336873 CALN1Q9BXU9 219 aa8.84□□□□□ -1
HPS4-201ENST00000336873 TMEM117Q9H0C3 514 aa8.84□□□□□ -1
HPS4-201ENST00000336873 SEMA4AQ9H3S1 761 aa8.84□□□□□ -1
HPS4-201ENST00000336873 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.84□□□□□ -1
HPS4-201ENST00000336873 TTLL3Q9Y4R7 772 aa8.84□□□□□ -1
HPS4-201ENST00000336873 PRRC2BQ5JSZ5 2229 aaKnown RBP8.84□□□□□ -1
HPS4-201ENST00000336873 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.83□□□□□ -1
HPS4-201ENST00000336873 ZNF233A6NK53 670 aa8.83□□□□□ -1
HPS4-201ENST00000336873 SGK1O00141 431 aa8.83□□□□□ -1
HPS4-201ENST00000336873 SPATA31C1P0DKV0 1188 aa8.83□□□□□ -1
HPS4-201ENST00000336873 QARSP47897 775 aaKnown RBP8.83□□□□□ -1
HPS4-201ENST00000336873 ZNF131P52739 623 aa8.83□□□□□ -1
HPS4-201ENST00000336873 ALS2CLQ60I27 953 aa8.83□□□□□ -1
HPS4-201ENST00000336873 ICE2Q659A1 982 aa8.83□□□□□ -1
HPS4-201ENST00000336873 HGSNATQ68CP4 663 aa8.83□□□□□ -1
HPS4-201ENST00000336873 PACS2Q86VP3 889 aa8.83□□□□□ -1
HPS4-201ENST00000336873 SESTD1Q86VW0 696 aa8.83□□□□□ -1
HPS4-201ENST00000336873 TATDN2Q93075 761 aa8.83□□□□□ -1
HPS4-201ENST00000336873 PBKQ96KB5 322 aa8.83□□□□□ -1
HPS4-201ENST00000336873 WDR18Q9BV38 432 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms