RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 CYB5D1Q6P9G0 228 aa10.4□□□□□ -0.74
COL4A6-201ENST00000334504 NUP93Q8N1F7 819 aa10.4□□□□□ -0.74
COL4A6-201ENST00000334504 EPAS1Q99814 870 aa10.4□□□□□ -0.74
COL4A6-201ENST00000334504 TRIM8Q9BZR9 551 aa10.4□□□□□ -0.74
COL4A6-201ENST00000334504 UNC45AQ9H3U1 944 aa10.4□□□□□ -0.74
COL4A6-201ENST00000334504 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-201ENST00000334504 THOC2Q8NI27 1593 aaKnown RBP10.4□□□□□ -0.74
COL4A6-201ENST00000334504 LRRIQ3A6PVS8 624 aaPredicted RBP10.4□□□□□ -0.75
COL4A6-201ENST00000334504 RNF135Q8IUD6 432 aa10.4□□□□□ -0.75
COL4A6-201ENST00000334504 OR2W6PQ8NHA6 318 aa10.4□□□□□ -0.75
COL4A6-201ENST00000334504 RFWD2Q8NHY2 731 aa10.4□□□□□ -0.75
COL4A6-201ENST00000334504 ASZ1Q8WWH4 475 aa10.4□□□□□ -0.75
COL4A6-201ENST00000334504 PIGSQ96S52 555 aa10.4□□□□□ -0.75
COL4A6-201ENST00000334504 TPP2P29144 1249 aaPredicted RBP10.4□□□□□ -0.75
COL4A6-201ENST00000334504 OSTNP61366 133 aa10.4□□□□□ -0.75
COL4A6-201ENST00000334504 DSG1Q02413 1049 aa10.4□□□□□ -0.75
COL4A6-201ENST00000334504 TBL3Q12788 808 aaKnown RBP10.4□□□□□ -0.75
COL4A6-201ENST00000334504 DHX34Q14147 1143 aaKnown RBP10.4□□□□□ -0.75
COL4A6-201ENST00000334504 STAT4Q14765 748 aa10.4□□□□□ -0.75
COL4A6-201ENST00000334504 C16orf89Q6UX73 402 aa10.4□□□□□ -0.75
COL4A6-201ENST00000334504 PPHLN1Q8NEY8 458 aaKnown RBP10.4□□□□□ -0.75
COL4A6-201ENST00000334504 ADAM33Q9BZ11 813 aa10.4□□□□□ -0.75
COL4A6-201ENST00000334504 OSBPL3Q9H4L5 887 aa10.4□□□□□ -0.75
COL4A6-201ENST00000334504 NGRNQ9NPE2 291 aaKnown RBP10.4□□□□□ -0.75
COL4A6-201ENST00000334504 UHRF1BP1Q6BDS2 1440 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 TSC22D2O75157 780 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 BTDP43251 543 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 CYP26B1Q9NR63 512 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 ITSN2Q9NZM3 1697 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 HOXA7P31268 230 aaPredicted RBP10.39□□□□□ -0.75
COL4A6-201ENST00000334504 PRCPP42785 496 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 ICA1Q05084 483 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 ACADSP16219 412 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 ADORA1P30542 326 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 IRAK1P51617 712 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 SEC24CP53992 1094 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 RUNX1T1Q06455 604 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 TRIM25Q14258 630 aaKnown RBP10.39□□□□□ -0.75
COL4A6-201ENST00000334504 UBE3CQ15386 1083 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 ULK4Q96C45 1275 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 BLOC1S6Q9UL45 172 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 ANGPT2O15123 496 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 GYS1P13807 737 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 CLK1P49759 484 aaKnown RBP10.39□□□□□ -0.75
COL4A6-201ENST00000334504 GRIN1Q05586 938 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 CDC37Q16543 378 aaPredicted RBP10.39□□□□□ -0.75
COL4A6-201ENST00000334504 HIF1AQ16665 826 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 FASTKD1Q53R41 847 aaKnown RBP10.39□□□□□ -0.75
COL4A6-201ENST00000334504 AGBL2Q5U5Z8 902 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 KCTD1Q719H9 257 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 KIRREL3Q8IZU9 778 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 TBC1D22AQ8WUA7 517 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 MRPS26Q9BYN8 205 aaKnown RBP10.39□□□□□ -0.75
COL4A6-201ENST00000334504 CAAP1Q9H8G2 361 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 SYCP2Q9BX26 1530 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 TRAPPC8Q9Y2L5 1435 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 RAPGEF6Q8TEU7 1601 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 PRPF3O43395 683 aaKnown RBP10.39□□□□□ -0.75
COL4A6-201ENST00000334504 XPOTO43592 962 aaKnown RBP10.39□□□□□ -0.75
COL4A6-201ENST00000334504 STRNO43815 780 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 SRGAP2CP0DJJ0 459 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 PCP11498 1178 aaKnown RBP10.39□□□□□ -0.75
COL4A6-201ENST00000334504 GTF2IP78347 998 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 KRT72Q14CN4 511 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 ARL13BQ3SXY8 428 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 ZCWPW2Q504Y3 356 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 TMC5Q6UXY8 1006 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 ARMCX6Q7L4S7 300 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 ZNF513Q8N8E2 541 aaPredicted RBP10.39□□□□□ -0.75
COL4A6-201ENST00000334504 ACAP3Q96P50 834 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 KCNK16Q96T55 309 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 MTRQ99707 1265 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 CASS4Q9NQ75 786 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 SEL1LQ9UBV2 794 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 AKT3Q9Y243 479 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 ITM2BQ9Y287 266 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 PTPRKQ15262 1439 aa10.39□□□□□ -0.75
COL4A6-201ENST00000334504 SFI1A8K8P3 1242 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 TCP10L2B9ZVM9 353 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 INO80B-WBP1J3KQ70 363 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 TCN1P20061 433 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-201ENST00000334504 TYK2P29597 1187 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 PPARGP37231 505 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-201ENST00000334504 METTL23Q86XA0 190 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 COA7Q96BR5 231 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 BBS2Q9BXC9 721 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 FSD1LQ9BXM9 530 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 INO80BQ9C086 356 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-201ENST00000334504 EML4Q9HC35 981 aaKnown RBP10.38□□□□□ -0.75
COL4A6-201ENST00000334504 TSR3Q9UJK0 312 aaKnown RBP10.38□□□□□ -0.75
COL4A6-201ENST00000334504 INSRP06213 1382 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 EIF4G3O43432 1585 aaKnown RBP10.38□□□□□ -0.75
COL4A6-201ENST00000334504 B2RBV5 119 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 OCM2P0CE71 109 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 OCMP0CE72 109 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-201ENST00000334504 PTGISQ16647 500 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 MFSD14BQ5SR56 506 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 STAG2Q8N3U4 1231 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 ATXN7L3BQ96GX2 97 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 CEP170P1Q96L14 293 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms