RNA–Protein interactions for RNA: ENST00000334186.8

PPFIA3-201, Transcript of PTPRF interacting protein alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPFIA3, Length 4,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-201ENST00000334186 VAMP7P51809 220 aa17.59■□□□□ 0.41
PPFIA3-201ENST00000334186 CDR2Q01850 454 aa17.59■□□□□ 0.41
PPFIA3-201ENST00000334186 RPS6KA2Q15349 733 aa17.59■□□□□ 0.41
PPFIA3-201ENST00000334186 BARGINQ6ZT62 677 aa17.59■□□□□ 0.41
PPFIA3-201ENST00000334186 HPS3Q969F9 1004 aa17.59■□□□□ 0.41
PPFIA3-201ENST00000334186 PRPSAP2O60256 369 aa17.59■□□□□ 0.41
PPFIA3-201ENST00000334186 SAT1P21673 171 aa17.59■□□□□ 0.41
PPFIA3-201ENST00000334186 ARL4AP40617 200 aa17.59■□□□□ 0.41
PPFIA3-201ENST00000334186 PTGISQ16647 500 aa17.59■□□□□ 0.41
PPFIA3-201ENST00000334186 BBS9Q3SYG4 887 aa17.59■□□□□ 0.41
PPFIA3-201ENST00000334186 RC3H1Q5TC82 1133 aaKnown RBP17.59■□□□□ 0.41
PPFIA3-201ENST00000334186 EPM2AIP1Q7L775 607 aaPredicted RBP17.59■□□□□ 0.41
PPFIA3-201ENST00000334186 PDIK1LQ8N165 341 aa17.59■□□□□ 0.41
PPFIA3-201ENST00000334186 RNPC3Q96LT9 517 aaKnown RBP17.59■□□□□ 0.41
PPFIA3-201ENST00000334186 C7orf25Q9BPX7 421 aa17.59■□□□□ 0.41
PPFIA3-201ENST00000334186 LXNQ9BS40 222 aa17.59■□□□□ 0.41
PPFIA3-201ENST00000334186 NOC2LQ9Y3T9 749 aaKnown RBP17.59■□□□□ 0.41
PPFIA3-201ENST00000334186 SRGNP10124 158 aa17.58■□□□□ 0.41
PPFIA3-201ENST00000334186 ACTN1P12814 892 aa17.58■□□□□ 0.41
PPFIA3-201ENST00000334186 PHEXP78562 749 aa17.58■□□□□ 0.41
PPFIA3-201ENST00000334186 KRT80Q6KB66 452 aa17.58■□□□□ 0.41
PPFIA3-201ENST00000334186 PRPF38AQ8NAV1 312 aaKnown RBP17.58■□□□□ 0.41
PPFIA3-201ENST00000334186 PPWD1Q96BP3 646 aaKnown RBP17.58■□□□□ 0.41
PPFIA3-201ENST00000334186 MS4A14Q96JA4 679 aa17.58■□□□□ 0.41
PPFIA3-201ENST00000334186 CALR3Q96L12 384 aaKnown RBP17.58■□□□□ 0.41
PPFIA3-201ENST00000334186 SLC38A10Q9HBR0 1119 aa17.58■□□□□ 0.41
PPFIA3-201ENST00000334186 HERC5Q9UII4 1024 aaKnown RBP17.58■□□□□ 0.41
PPFIA3-201ENST00000334186 SPATA31A6Q5VVP1 1343 aa17.58■□□□□ 0.41
PPFIA3-201ENST00000334186 DENND3A2RUS2 1198 aa17.58■□□□□ 0.4
PPFIA3-201ENST00000334186 STXBP3O00186 592 aa17.58■□□□□ 0.4
PPFIA3-201ENST00000334186 SH3BP5O60239 455 aa17.58■□□□□ 0.4
PPFIA3-201ENST00000334186 SFNP31947 248 aa17.58■□□□□ 0.4
PPFIA3-201ENST00000334186 FRMD5Q7Z6J6 570 aa17.58■□□□□ 0.4
PPFIA3-201ENST00000334186 THNSL1Q8IYQ7 743 aa17.58■□□□□ 0.4
PPFIA3-201ENST00000334186 ARHGAP18Q8N392 663 aa17.58■□□□□ 0.4
PPFIA3-201ENST00000334186 CCNYQ8ND76 341 aa17.58■□□□□ 0.4
PPFIA3-201ENST00000334186 INTS2Q9H0H0 1204 aaKnown RBP17.58■□□□□ 0.4
PPFIA3-201ENST00000334186 XAB2Q9HCS7 855 aaKnown RBP17.58■□□□□ 0.4
PPFIA3-201ENST00000334186 CNTNAP5Q8WYK1 1306 aa17.58■□□□□ 0.4
PPFIA3-201ENST00000334186 CNGA1P29973 690 aa17.58■□□□□ 0.4
PPFIA3-201ENST00000334186 CARSP49589 748 aaKnown RBP17.58■□□□□ 0.4
PPFIA3-201ENST00000334186 ITKQ08881 620 aa17.58■□□□□ 0.4
PPFIA3-201ENST00000334186 ANKRD20A4Q4UJ75 823 aa17.58■□□□□ 0.4
PPFIA3-201ENST00000334186 ANKRD20A8PQ5CZ79 823 aa17.58■□□□□ 0.4
PPFIA3-201ENST00000334186 ANKRD20A2Q5SQ80 823 aa17.58■□□□□ 0.4
PPFIA3-201ENST00000334186 ANKRD20A1Q5TYW2 823 aa17.58■□□□□ 0.4
PPFIA3-201ENST00000334186 CYB5D1Q6P9G0 228 aa17.58■□□□□ 0.4
PPFIA3-201ENST00000334186 FBXO33Q7Z6M2 555 aa17.58■□□□□ 0.4
PPFIA3-201ENST00000334186 NSUN6Q8TEA1 469 aaKnown RBP17.58■□□□□ 0.4
PPFIA3-201ENST00000334186 RNF146Q9NTX7 359 aa17.58■□□□□ 0.4
PPFIA3-201ENST00000334186 PDS5AQ29RF7 1337 aaKnown RBP17.58■□□□□ 0.4
PPFIA3-201ENST00000334186 CLDN3O15551 220 aa17.57■□□□□ 0.4
PPFIA3-201ENST00000334186 EYA4O95677 639 aa17.57■□□□□ 0.4
PPFIA3-201ENST00000334186 PLCB4Q15147 1175 aa17.57■□□□□ 0.4
PPFIA3-201ENST00000334186 TMEM35BQ8NCS4 154 aa17.57■□□□□ 0.4
PPFIA3-201ENST00000334186 RBM12Q9NTZ6 932 aaKnown RBP17.57■□□□□ 0.4
PPFIA3-201ENST00000334186 PDXKO00764 312 aa17.57■□□□□ 0.4
PPFIA3-201ENST00000334186 KLC1Q07866 573 aa17.57■□□□□ 0.4
PPFIA3-201ENST00000334186 STK4Q13043 487 aa17.57■□□□□ 0.4
PPFIA3-201ENST00000334186 CRYMQ14894 314 aa17.57■□□□□ 0.4
PPFIA3-201ENST00000334186 STXBP2Q15833 593 aa17.57■□□□□ 0.4
PPFIA3-201ENST00000334186 LRIG3Q6UXM1 1119 aa17.57■□□□□ 0.4
PPFIA3-201ENST00000334186 CENPUQ71F23 418 aa17.57■□□□□ 0.4
PPFIA3-201ENST00000334186 HIPK4Q8NE63 616 aa17.57■□□□□ 0.4
PPFIA3-201ENST00000334186 HAUS5O94927 633 aa17.57■□□□□ 0.4
PPFIA3-201ENST00000334186 ABL1P00519 1130 aa17.57■□□□□ 0.4
PPFIA3-201ENST00000334186 TRIM49P0CI25 452 aa17.57■□□□□ 0.4
PPFIA3-201ENST00000334186 TRIM49CP0CI26 452 aa17.57■□□□□ 0.4
PPFIA3-201ENST00000334186 MARK3P27448 753 aa17.57■□□□□ 0.4
PPFIA3-201ENST00000334186 ZNF667Q5HYK9 610 aa17.57■□□□□ 0.4
PPFIA3-201ENST00000334186 LRRN4CLQ8ND94 238 aa17.57■□□□□ 0.4
PPFIA3-201ENST00000334186 EPS15L1Q9UBC2 864 aa17.57■□□□□ 0.4
PPFIA3-201ENST00000334186 PPARGC1AQ9UBK2 798 aaKnown RBP17.57■□□□□ 0.4
PPFIA3-201ENST00000334186 ARL2BPQ9Y2Y0 163 aa17.57■□□□□ 0.4
PPFIA3-201ENST00000334186 ZNF211Q13398 564 aaPredicted RBP17.57■□□□□ 0.4
PPFIA3-201ENST00000334186 GLYCTKQ8IVS8 523 aa17.57■□□□□ 0.4
PPFIA3-201ENST00000334186 TRIML2Q8N7C3 387 aa17.57■□□□□ 0.4
PPFIA3-201ENST00000334186 XPO6Q96QU8 1125 aaKnown RBP17.57■□□□□ 0.4
PPFIA3-201ENST00000334186 FAM213AQ9BRX8 229 aa17.57■□□□□ 0.4
PPFIA3-201ENST00000334186 AGPAT5Q9NUQ2 364 aa17.57■□□□□ 0.4
PPFIA3-201ENST00000334186 FAM187AA6NFU0 413 aa17.56■□□□□ 0.4
PPFIA3-201ENST00000334186 PLS3P13797 630 aa17.56■□□□□ 0.4
PPFIA3-201ENST00000334186 RASA1P20936 1047 aa17.56■□□□□ 0.4
PPFIA3-201ENST00000334186 RFX1P22670 979 aa17.56■□□□□ 0.4
PPFIA3-201ENST00000334186 SNRNP48Q6IEG0 339 aaKnown RBP17.56■□□□□ 0.4
PPFIA3-201ENST00000334186 RSRC2Q7L4I2 434 aaKnown RBP17.56■□□□□ 0.4
PPFIA3-201ENST00000334186 SPATA21Q7Z572 469 aa17.56■□□□□ 0.4
PPFIA3-201ENST00000334186 GRAMD1AQ96CP6 724 aa17.56■□□□□ 0.4
PPFIA3-201ENST00000334186 HEXIM2Q96MH2 286 aaKnown RBP17.56■□□□□ 0.4
PPFIA3-201ENST00000334186 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.56■□□□□ 0.4
PPFIA3-201ENST00000334186 UBR1Q8IWV7 1749 aa17.56■□□□□ 0.4
PPFIA3-201ENST00000334186 TJP3O95049 919 aa17.56■□□□□ 0.4
PPFIA3-201ENST00000334186 CCND1P24385 295 aa17.56■□□□□ 0.4
PPFIA3-201ENST00000334186 NR1H3Q13133 447 aa17.56■□□□□ 0.4
PPFIA3-201ENST00000334186 PRPSAP1Q14558 356 aa17.56■□□□□ 0.4
PPFIA3-201ENST00000334186 EPHA7Q15375 998 aa17.56■□□□□ 0.4
PPFIA3-201ENST00000334186 MMEL1Q495T6 779 aa17.56■□□□□ 0.4
PPFIA3-201ENST00000334186 CEP55Q53EZ4 464 aa17.56■□□□□ 0.4
PPFIA3-201ENST00000334186 PACS2Q86VP3 889 aa17.56■□□□□ 0.4
PPFIA3-201ENST00000334186 LRRC43Q8N309 656 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms