RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 FAM81BQ96LP2 452 aa11.62□□□□□ -0.55
CCDC172-201ENST00000333254 ZNF341Q9BYN7 854 aa11.62□□□□□ -0.55
CCDC172-201ENST00000333254 FAM129AQ9BZQ8 928 aa11.62□□□□□ -0.55
CCDC172-201ENST00000333254 IKZF4Q9H2S9 585 aa11.62□□□□□ -0.55
CCDC172-201ENST00000333254 HSPBP1Q9NZL4 362 aa11.62□□□□□ -0.55
CCDC172-201ENST00000333254 PPP1R9AQ9ULJ8 1098 aa11.62□□□□□ -0.55
CCDC172-201ENST00000333254 IGSF9BQ9UPX0 1349 aa11.62□□□□□ -0.55
CCDC172-201ENST00000333254 GOLGA6L10A0A0M3HER8 536 aa11.62□□□□□ -0.55
CCDC172-201ENST00000333254 ESYT3A0FGR9 886 aa11.62□□□□□ -0.55
CCDC172-201ENST00000333254 H0YGN5 161 aa11.62□□□□□ -0.55
CCDC172-201ENST00000333254 FOXN3O00409 490 aaPredicted RBP11.62□□□□□ -0.55
CCDC172-201ENST00000333254 WNT10BO00744 389 aa11.62□□□□□ -0.55
CCDC172-201ENST00000333254 YWHABP31946 246 aaKnown RBP11.62□□□□□ -0.55
CCDC172-201ENST00000333254 MXI1P50539 228 aa11.62□□□□□ -0.55
CCDC172-201ENST00000333254 ZNF280AP59817 542 aaPredicted RBP11.62□□□□□ -0.55
CCDC172-201ENST00000333254 PGM5Q15124 567 aa11.62□□□□□ -0.55
CCDC172-201ENST00000333254 ZNF746Q6NUN9 644 aaPredicted RBP11.62□□□□□ -0.55
CCDC172-201ENST00000333254 RUFY4Q6ZNE9 571 aa11.62□□□□□ -0.55
CCDC172-201ENST00000333254 USP37Q86T82 979 aa11.62□□□□□ -0.55
CCDC172-201ENST00000333254 MAP4K3Q8IVH8 894 aa11.62□□□□□ -0.55
CCDC172-201ENST00000333254 KSR1Q8IVT5 923 aa11.62□□□□□ -0.55
CCDC172-201ENST00000333254 FAM71AQ8IYT1 594 aa11.62□□□□□ -0.55
CCDC172-201ENST00000333254 GPRASP2Q96D09 838 aa11.62□□□□□ -0.55
CCDC172-201ENST00000333254 FBXL18Q96ME1 805 aa11.62□□□□□ -0.55
CCDC172-201ENST00000333254 RUNDC3BQ96NL0 473 aa11.62□□□□□ -0.55
CCDC172-201ENST00000333254 CAMKK2Q96RR4 588 aa11.62□□□□□ -0.55
CCDC172-201ENST00000333254 NTPCRQ9BSD7 190 aaKnown RBP11.62□□□□□ -0.55
CCDC172-201ENST00000333254 GLIS2Q9BZE0 524 aaPredicted RBP11.62□□□□□ -0.55
CCDC172-201ENST00000333254 TMBIM4Q9HC24 238 aa11.62□□□□□ -0.55
CCDC172-201ENST00000333254 POLD4Q9HCU8 107 aa11.62□□□□□ -0.55
CCDC172-201ENST00000333254 NFS1Q9Y697 457 aa11.62□□□□□ -0.55
CCDC172-201ENST00000333254 KCNA3P22001 575 aa11.61□□□□□ -0.55
CCDC172-201ENST00000333254 RPS12P25398 132 aaKnown RBP11.61□□□□□ -0.55
CCDC172-201ENST00000333254 DNA2P51530 1060 aa11.61□□□□□ -0.55
CCDC172-201ENST00000333254 OAZ1P54368 228 aa11.61□□□□□ -0.55
CCDC172-201ENST00000333254 CORO7P57737 925 aa11.61□□□□□ -0.55
CCDC172-201ENST00000333254 GPC5P78333 572 aa11.61□□□□□ -0.55
CCDC172-201ENST00000333254 MRPS25P82663 173 aaKnown RBP11.61□□□□□ -0.55
CCDC172-201ENST00000333254 PPP3CAQ08209 521 aa11.61□□□□□ -0.55
CCDC172-201ENST00000333254 HLTFQ14527 1009 aaKnown RBP eCLIP11.61□□□□□ -0.55
CCDC172-201ENST00000333254 C3orf20Q8ND61 904 aa11.61□□□□□ -0.55
CCDC172-201ENST00000333254 SLC16A10Q8TF71 515 aa11.61□□□□□ -0.55
CCDC172-201ENST00000333254 SHC3Q92529 594 aa11.61□□□□□ -0.55
CCDC172-201ENST00000333254 RNPC3Q96LT9 517 aaKnown RBP11.61□□□□□ -0.55
CCDC172-201ENST00000333254 TEPSINQ96N21 525 aa11.61□□□□□ -0.55
CCDC172-201ENST00000333254 PDCD2LQ9BRP1 358 aa11.61□□□□□ -0.55
CCDC172-201ENST00000333254 DDX47Q9H0S4 455 aaKnown RBP11.61□□□□□ -0.55
CCDC172-201ENST00000333254 GOLPH3Q9H4A6 298 aa11.61□□□□□ -0.55
CCDC172-201ENST00000333254 TCEAL9Q9UHQ7 104 aa11.61□□□□□ -0.55
CCDC172-201ENST00000333254 KCNG1Q9UIX4 513 aa11.61□□□□□ -0.55
CCDC172-201ENST00000333254 PLAAQ9Y263 795 aa11.61□□□□□ -0.55
CCDC172-201ENST00000333254 UTP11Q9Y3A2 253 aaKnown RBP11.61□□□□□ -0.55
CCDC172-201ENST00000333254 LCTP09848 1927 aa11.6□□□□□ -0.55
CCDC172-201ENST00000333254 GOLGA6L10A6NI86 522 aa11.6□□□□□ -0.55
CCDC172-201ENST00000333254 H0YCG3 227 aa11.6□□□□□ -0.55
CCDC172-201ENST00000333254 ZC3H11AO75152 810 aaKnown RBP eCLIP11.6□□□□□ -0.55
CCDC172-201ENST00000333254 VCAM1P19320 739 aa11.6□□□□□ -0.55
CCDC172-201ENST00000333254 NR1D1P20393 614 aa11.6□□□□□ -0.55
CCDC172-201ENST00000333254 HSD17B3P37058 310 aa11.6□□□□□ -0.55
CCDC172-201ENST00000333254 GPC3P51654 580 aa11.6□□□□□ -0.55
CCDC172-201ENST00000333254 SMTNP53814 917 aa11.6□□□□□ -0.55
CCDC172-201ENST00000333254 EIF3BP55884 814 aaKnown RBP11.6□□□□□ -0.55
CCDC172-201ENST00000333254 GNGT1P63211 74 aa11.6□□□□□ -0.55
CCDC172-201ENST00000333254 SPP2Q13103 211 aa11.6□□□□□ -0.55
CCDC172-201ENST00000333254 ZYXQ15942 572 aaKnown RBP11.6□□□□□ -0.55
CCDC172-201ENST00000333254 DCAF12L1Q5VU92 463 aa11.6□□□□□ -0.55
CCDC172-201ENST00000333254 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.6□□□□□ -0.55
CCDC172-201ENST00000333254 ENOSF1Q7L5Y1 443 aa11.6□□□□□ -0.55
CCDC172-201ENST00000333254 CDAN1Q8IWY9 1227 aa11.6□□□□□ -0.55
CCDC172-201ENST00000333254 UBL4BQ8N7F7 174 aa11.6□□□□□ -0.55
CCDC172-201ENST00000333254 EPS8L1Q8TE68 723 aa11.6□□□□□ -0.55
CCDC172-201ENST00000333254 KIFAP3Q92845 792 aa11.6□□□□□ -0.55
CCDC172-201ENST00000333254 ARHGEF26Q96DR7 871 aa11.6□□□□□ -0.55
CCDC172-201ENST00000333254 MFSD14AQ96MC6 490 aa11.6□□□□□ -0.55
CCDC172-201ENST00000333254 CBWD1Q9BRT8 395 aa11.6□□□□□ -0.55
CCDC172-201ENST00000333254 TXLNGYQ9BZA5 131 aa11.6□□□□□ -0.55
CCDC172-201ENST00000333254 WNT8AQ9H1J5 351 aa11.6□□□□□ -0.55
CCDC172-201ENST00000333254 TMEM8AQ9HCN3 771 aa11.6□□□□□ -0.55
CCDC172-201ENST00000333254 UBE2TQ9NPD8 197 aaPredicted RBP11.6□□□□□ -0.55
CCDC172-201ENST00000333254 OSGEPQ9NPF4 335 aa11.6□□□□□ -0.55
CCDC172-201ENST00000333254 PXMP2Q9NR77 195 aa11.6□□□□□ -0.55
CCDC172-201ENST00000333254 GGA2Q9UJY4 613 aa11.6□□□□□ -0.55
CCDC172-201ENST00000333254 NOCTQ9UK39 431 aaKnown RBP11.6□□□□□ -0.55
CCDC172-201ENST00000333254 NFASCO94856 1347 aa11.6□□□□□ -0.55
CCDC172-201ENST00000333254 ZBED4O75132 1171 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 PPFIA2O75334 1257 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 STAM2O75886 525 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 KRT14P02533 472 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 FGGP02679 453 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 ALAS1P13196 640 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 CTNNA2P26232 953 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 CHRNA3P32297 505 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 GUCY2FP51841 1108 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 MFAP3P55082 362 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 RPS6P62753 249 aaKnown RBP11.59□□□□□ -0.55
CCDC172-201ENST00000333254 DLG4P78352 724 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 IRX5P78411 483 aaPredicted RBP11.59□□□□□ -0.55
CCDC172-201ENST00000333254 CXCL9Q07325 125 aa11.59□□□□□ -0.55
CCDC172-201ENST00000333254 UAP1Q16222 522 aaPredicted RBP11.59□□□□□ -0.55
CCDC172-201ENST00000333254 CYP1B1Q16678 543 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms