RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 ZNF720Q7Z2F6 126 aa17.67■□□□□ 0.42
LRRC28-202ENST00000331450 SLC17A8Q8NDX2 589 aa17.67■□□□□ 0.42
LRRC28-202ENST00000331450 SPATA20Q8TB22 786 aa17.67■□□□□ 0.42
LRRC28-202ENST00000331450 HERVK_113Q902F9 699 aa17.67■□□□□ 0.42
LRRC28-202ENST00000331450 FTHL17Q9BXU8 183 aa17.67■□□□□ 0.42
LRRC28-202ENST00000331450 TTC3P53804 2025 aa17.67■□□□□ 0.42
LRRC28-202ENST00000331450 COL4A6Q14031 1691 aa17.67■□□□□ 0.42
LRRC28-202ENST00000331450 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.66■□□□□ 0.42
LRRC28-202ENST00000331450 TTLL13PA6NNM8 815 aa17.66■□□□□ 0.42
LRRC28-202ENST00000331450 K7ERI5 159 aa17.66■□□□□ 0.42
LRRC28-202ENST00000331450 ACKR2O00590 384 aa17.66■□□□□ 0.42
LRRC28-202ENST00000331450 B4GALT5O43286 388 aa17.66■□□□□ 0.42
LRRC28-202ENST00000331450 ERLIN2O94905 339 aa17.66■□□□□ 0.42
LRRC28-202ENST00000331450 RPN1P04843 607 aaKnown RBP17.66■□□□□ 0.42
LRRC28-202ENST00000331450 ACTN1P12814 892 aa17.66■□□□□ 0.42
LRRC28-202ENST00000331450 ARF4P18085 180 aaPredicted RBP17.66■□□□□ 0.42
LRRC28-202ENST00000331450 CASP5P51878 434 aa17.66■□□□□ 0.42
LRRC28-202ENST00000331450 IKBKEQ14164 716 aa17.66■□□□□ 0.42
LRRC28-202ENST00000331450 KMT5BQ4FZB7 885 aa17.66■□□□□ 0.42
LRRC28-202ENST00000331450 FAM26FQ5R3K3 315 aa17.66■□□□□ 0.42
LRRC28-202ENST00000331450 C9orf50Q5SZB4 431 aa17.66■□□□□ 0.42
LRRC28-202ENST00000331450 OTOP2Q7RTS6 562 aa17.66■□□□□ 0.42
LRRC28-202ENST00000331450 RTN4RL1Q86UN2 441 aaPredicted RBP17.66■□□□□ 0.42
LRRC28-202ENST00000331450 HPS3Q969F9 1004 aa17.66■□□□□ 0.42
LRRC28-202ENST00000331450 HVCN1Q96D96 273 aa17.66■□□□□ 0.42
LRRC28-202ENST00000331450 UBE2OQ9C0C9 1292 aaKnown RBP17.66■□□□□ 0.42
LRRC28-202ENST00000331450 TSPYL2Q9H2G4 693 aaPredicted RBP17.66■□□□□ 0.42
LRRC28-202ENST00000331450 MRPL44Q9H9J2 332 aaKnown RBP17.66■□□□□ 0.42
LRRC28-202ENST00000331450 CHST12Q9NRB3 414 aa17.66■□□□□ 0.42
LRRC28-202ENST00000331450 CEP290O15078 2479 aa17.66■□□□□ 0.42
LRRC28-202ENST00000331450 RALGAPA2Q2PPJ7 1873 aa17.65■□□□□ 0.42
LRRC28-202ENST00000331450 EFCAB14O75071 495 aa17.65■□□□□ 0.42
LRRC28-202ENST00000331450 RHOBTB3O94955 611 aa17.65■□□□□ 0.42
LRRC28-202ENST00000331450 MBD3O95983 291 aa17.65■□□□□ 0.42
LRRC28-202ENST00000331450 AXLP30530 894 aa17.65■□□□□ 0.42
LRRC28-202ENST00000331450 ABCD1P33897 745 aa17.65■□□□□ 0.42
LRRC28-202ENST00000331450 WDR5P61964 334 aaKnown RBP17.65■□□□□ 0.42
LRRC28-202ENST00000331450 ALCAMQ13740 583 aa17.65■□□□□ 0.42
LRRC28-202ENST00000331450 KCNB1Q14721 858 aa17.65■□□□□ 0.42
LRRC28-202ENST00000331450 ZC2HC1CQ53FD0 456 aaPredicted RBP17.65■□□□□ 0.42
LRRC28-202ENST00000331450 EPM2AIP1Q7L775 607 aaPredicted RBP17.65■□□□□ 0.42
LRRC28-202ENST00000331450 MAP4K3Q8IVH8 894 aa17.65■□□□□ 0.42
LRRC28-202ENST00000331450 GLIS3Q8NEA6 775 aa17.65■□□□□ 0.42
LRRC28-202ENST00000331450 TRAIPQ9BWF2 469 aa17.65■□□□□ 0.42
LRRC28-202ENST00000331450 RGS18Q9NS28 235 aa17.65■□□□□ 0.42
LRRC28-202ENST00000331450 EXOC1Q9NV70 894 aa17.65■□□□□ 0.42
LRRC28-202ENST00000331450 TBC1D7Q9P0N9 293 aa17.65■□□□□ 0.42
LRRC28-202ENST00000331450 CXXC1Q9P0U4 656 aaPredicted RBP17.65■□□□□ 0.42
LRRC28-202ENST00000331450 HOOK1Q9UJC3 728 aaKnown RBP17.65■□□□□ 0.42
LRRC28-202ENST00000331450 TBX20Q9UMR3 447 aa17.65■□□□□ 0.42
LRRC28-202ENST00000331450 PIN4Q9Y237 131 aaKnown RBP17.65■□□□□ 0.42
LRRC28-202ENST00000331450 FNDC1Q4ZHG4 1894 aaPredicted RBP17.65■□□□□ 0.42
LRRC28-202ENST00000331450 C9IYK1 514 aa17.64■□□□□ 0.41
LRRC28-202ENST00000331450 PIGRP01833 764 aa17.64■□□□□ 0.41
LRRC28-202ENST00000331450 MYBP10242 640 aa17.64■□□□□ 0.41
LRRC28-202ENST00000331450 SARSP49591 514 aaKnown RBP17.64■□□□□ 0.41
LRRC28-202ENST00000331450 PRPF4BQ13523 1007 aaKnown RBP17.64■□□□□ 0.41
LRRC28-202ENST00000331450 SHHQ15465 462 aa17.64■□□□□ 0.41
LRRC28-202ENST00000331450 NT5DC1Q5TFE4 455 aa17.64■□□□□ 0.41
LRRC28-202ENST00000331450 ERCC4Q92889 916 aaPredicted RBP17.64■□□□□ 0.41
LRRC28-202ENST00000331450 CPB2Q96IY4 423 aa17.64■□□□□ 0.41
LRRC28-202ENST00000331450 ADAM2Q99965 735 aa17.64■□□□□ 0.41
LRRC28-202ENST00000331450 CLSTN2Q9H4D0 955 aa17.64■□□□□ 0.41
LRRC28-202ENST00000331450 USP20Q9Y2K6 914 aa17.64■□□□□ 0.41
LRRC28-202ENST00000331450 PCDHA5Q9Y5H7 936 aa17.64■□□□□ 0.41
LRRC28-202ENST00000331450 PDCD11Q14690 1871 aaKnown RBP17.63■□□□□ 0.41
LRRC28-202ENST00000331450 A0A1B0GUA9 196 aa17.63■□□□□ 0.41
LRRC28-202ENST00000331450 ENPP3O14638 875 aa17.63■□□□□ 0.41
LRRC28-202ENST00000331450 EIF3DO15371 548 aaKnown RBP eCLIP17.63■□□□□ 0.41
LRRC28-202ENST00000331450 GCNT3O95395 438 aa17.63■□□□□ 0.41
LRRC28-202ENST00000331450 STRN3Q13033 797 aa17.63■□□□□ 0.41
LRRC28-202ENST00000331450 PSMD2Q13200 908 aa17.63■□□□□ 0.41
LRRC28-202ENST00000331450 UBXN11Q5T124 520 aa17.63■□□□□ 0.41
LRRC28-202ENST00000331450 PRPF38BQ5VTL8 546 aaKnown RBP17.63■□□□□ 0.41
LRRC28-202ENST00000331450 NOTUMQ6P988 496 aa17.63■□□□□ 0.41
LRRC28-202ENST00000331450 CHRDL2Q6WN34 429 aa17.63■□□□□ 0.41
LRRC28-202ENST00000331450 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.63■□□□□ 0.41
LRRC28-202ENST00000331450 CRIPAKQ8N1N5 446 aa17.63■□□□□ 0.41
LRRC28-202ENST00000331450 KIAA0895Q8NCT3 520 aa17.63■□□□□ 0.41
LRRC28-202ENST00000331450 CCDC51Q96ER9 411 aa17.63■□□□□ 0.41
LRRC28-202ENST00000331450 GSDMAQ96QA5 445 aa17.63■□□□□ 0.41
LRRC28-202ENST00000331450 MRPL4Q9BYD3 311 aaKnown RBP17.63■□□□□ 0.41
LRRC28-202ENST00000331450 PDZD7Q9H5P4 517 aa17.63■□□□□ 0.41
LRRC28-202ENST00000331450 C1orf112Q9NSG2 853 aa17.63■□□□□ 0.41
LRRC28-202ENST00000331450 ZMYM2Q9UBW7 1377 aa17.63■□□□□ 0.41
LRRC28-202ENST00000331450 ABLIM1O14639 778 aa17.62■□□□□ 0.41
LRRC28-202ENST00000331450 ZSCAN20P17040 1043 aaPredicted RBP17.62■□□□□ 0.41
LRRC28-202ENST00000331450 PROZP22891 400 aa17.62■□□□□ 0.41
LRRC28-202ENST00000331450 FAM189BP81408 668 aa17.62■□□□□ 0.41
LRRC28-202ENST00000331450 DEFB103AP81534 67 aa17.62■□□□□ 0.41
LRRC28-202ENST00000331450 KCNA1Q09470 495 aa17.62■□□□□ 0.41
LRRC28-202ENST00000331450 STK4Q13043 487 aa17.62■□□□□ 0.41
LRRC28-202ENST00000331450 L1TD1Q5T7N2 865 aaKnown RBP17.62■□□□□ 0.41
LRRC28-202ENST00000331450 EEF1DP3Q658K8 133 aa17.62■□□□□ 0.41
LRRC28-202ENST00000331450 ZPBP2Q6X784 338 aa17.62■□□□□ 0.41
LRRC28-202ENST00000331450 SLC24A5Q71RS6 500 aa17.62■□□□□ 0.41
LRRC28-202ENST00000331450 SMARCE1Q969G3 411 aa17.62■□□□□ 0.41
LRRC28-202ENST00000331450 ACO2Q99798 780 aaKnown RBP17.62■□□□□ 0.41
LRRC28-202ENST00000331450 TARS2Q9BW92 718 aaKnown RBP17.62■□□□□ 0.41
LRRC28-202ENST00000331450 MTIF3Q9H2K0 278 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms