RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 MGARPQ8TDB4 240 aa19.51■□□□□ 0.71
CLSTN3-202ENST00000331148 KCNV2Q8TDN2 545 aa19.51■□□□□ 0.71
CLSTN3-202ENST00000331148 RFFLQ8WZ73 363 aa19.51■□□□□ 0.71
CLSTN3-202ENST00000331148 SIX2Q9NPC8 291 aa19.51■□□□□ 0.71
CLSTN3-202ENST00000331148 ETAA1Q9NY74 926 aa19.51■□□□□ 0.71
CLSTN3-202ENST00000331148 DBR1Q9UK59 544 aaKnown RBP19.51■□□□□ 0.71
CLSTN3-202ENST00000331148 NPHP3-ACAD11A0A0J9YXS1 232 aa19.5■□□□□ 0.71
CLSTN3-202ENST00000331148 SNUPNO95149 360 aaKnown RBP19.5■□□□□ 0.71
CLSTN3-202ENST00000331148 PTGIRP43119 386 aa19.5■□□□□ 0.71
CLSTN3-202ENST00000331148 RPL21P46778 160 aaKnown RBP19.5■□□□□ 0.71
CLSTN3-202ENST00000331148 PLS1Q14651 629 aa19.5■□□□□ 0.71
CLSTN3-202ENST00000331148 EXOC3L1Q86VI1 746 aa19.5■□□□□ 0.71
CLSTN3-202ENST00000331148 FITM2Q8N6M3 262 aa19.5■□□□□ 0.71
CLSTN3-202ENST00000331148 LNX1Q8TBB1 728 aaPredicted RBP19.5■□□□□ 0.71
CLSTN3-202ENST00000331148 SLC35G2Q8TBE7 412 aa19.5■□□□□ 0.71
CLSTN3-202ENST00000331148 NAF1Q96HR8 494 aaKnown RBP19.5■□□□□ 0.71
CLSTN3-202ENST00000331148 PIGSQ96S52 555 aa19.5■□□□□ 0.71
CLSTN3-202ENST00000331148 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.5■□□□□ 0.71
CLSTN3-202ENST00000331148 MTRF1LQ9UGC7 380 aaKnown RBP19.5■□□□□ 0.71
CLSTN3-202ENST00000331148 ARMCX3Q9UH62 379 aaPredicted RBP19.5■□□□□ 0.71
CLSTN3-202ENST00000331148 IGSF9BQ9UPX0 1349 aa19.5■□□□□ 0.71
CLSTN3-202ENST00000331148 KRT13P13646 458 aa19.5■□□□□ 0.71
CLSTN3-202ENST00000331148 RASA1P20936 1047 aa19.5■□□□□ 0.71
CLSTN3-202ENST00000331148 PPATQ06203 517 aa19.5■□□□□ 0.71
CLSTN3-202ENST00000331148 R3HDM1Q15032 1099 aaKnown RBP19.5■□□□□ 0.71
CLSTN3-202ENST00000331148 EPHA7Q15375 998 aa19.5■□□□□ 0.71
CLSTN3-202ENST00000331148 FRMD5Q7Z6J6 570 aa19.5■□□□□ 0.71
CLSTN3-202ENST00000331148 OLIG1Q8TAK6 271 aa19.5■□□□□ 0.71
CLSTN3-202ENST00000331148 C18orf8Q96DM3 657 aa19.5■□□□□ 0.71
CLSTN3-202ENST00000331148 PLCD4Q9BRC7 762 aa19.5■□□□□ 0.71
CLSTN3-202ENST00000331148 YDJCA8MPS7 323 aa19.49■□□□□ 0.71
CLSTN3-202ENST00000331148 FESP07332 822 aa19.49■□□□□ 0.71
CLSTN3-202ENST00000331148 GBP1P32455 592 aa19.49■□□□□ 0.71
CLSTN3-202ENST00000331148 RBBP5Q15291 538 aaKnown RBP19.49■□□□□ 0.71
CLSTN3-202ENST00000331148 NUGGCQ68CJ6 796 aa19.49■□□□□ 0.71
CLSTN3-202ENST00000331148 TEX9Q8N6V9 391 aa19.49■□□□□ 0.71
CLSTN3-202ENST00000331148 VAT1LQ9HCJ6 419 aa19.49■□□□□ 0.71
CLSTN3-202ENST00000331148 DDX4Q9NQI0 724 aaKnown RBP19.49■□□□□ 0.71
CLSTN3-202ENST00000331148 AHCYL1O43865 530 aa19.49■□□□□ 0.71
CLSTN3-202ENST00000331148 PHF2O75151 1096 aa19.49■□□□□ 0.71
CLSTN3-202ENST00000331148 TMEM253P0C7T8 217 aa19.49■□□□□ 0.71
CLSTN3-202ENST00000331148 CCNB1P14635 433 aa19.49■□□□□ 0.71
CLSTN3-202ENST00000331148 ATP4AP20648 1035 aa19.49■□□□□ 0.71
CLSTN3-202ENST00000331148 RBM5P52756 815 aaKnown RBP eCLIP19.49■□□□□ 0.71
CLSTN3-202ENST00000331148 RWDD2BP57060 319 aa19.49■□□□□ 0.71
CLSTN3-202ENST00000331148 THEMIS2Q5TEJ8 643 aa19.49■□□□□ 0.71
CLSTN3-202ENST00000331148 GJB7Q6PEY0 223 aa19.49■□□□□ 0.71
CLSTN3-202ENST00000331148 USP17L2Q6R6M4 530 aa19.49■□□□□ 0.71
CLSTN3-202ENST00000331148 VPS33BQ9H267 617 aa19.49■□□□□ 0.71
CLSTN3-202ENST00000331148 PRKAG3Q9UGI9 489 aa19.49■□□□□ 0.71
CLSTN3-202ENST00000331148 PARP2Q9UGN5 583 aa19.49■□□□□ 0.71
CLSTN3-202ENST00000331148 SERPINA10Q9UK55 444 aa19.49■□□□□ 0.71
CLSTN3-202ENST00000331148 ZNF646O15015 1829 aaPredicted RBP19.48■□□□□ 0.71
CLSTN3-202ENST00000331148 E9PMD0 336 aa19.48■□□□□ 0.71
CLSTN3-202ENST00000331148 GFPT2O94808 682 aa19.48■□□□□ 0.71
CLSTN3-202ENST00000331148 DCAF17Q5H9S7 520 aaPredicted RBP19.48■□□□□ 0.71
CLSTN3-202ENST00000331148 GPBP1Q86WP2 473 aa19.48■□□□□ 0.71
CLSTN3-202ENST00000331148 LARGE2Q8N3Y3 721 aa19.48■□□□□ 0.71
CLSTN3-202ENST00000331148 SLC30A5Q8TAD4 765 aa19.48■□□□□ 0.71
CLSTN3-202ENST00000331148 ALG3Q92685 438 aa19.48■□□□□ 0.71
CLSTN3-202ENST00000331148 RMDN2Q96LZ7 410 aa19.48■□□□□ 0.71
CLSTN3-202ENST00000331148 ZNF277Q9NRM2 450 aaPredicted RBP19.48■□□□□ 0.71
CLSTN3-202ENST00000331148 ADAMTSL1Q8N6G6 1762 aa19.48■□□□□ 0.71
CLSTN3-202ENST00000331148 TMEM120BA0PK00 339 aa19.48■□□□□ 0.71
CLSTN3-202ENST00000331148 AP1G2O75843 785 aa19.48■□□□□ 0.71
CLSTN3-202ENST00000331148 XRCC5P13010 732 aaKnown RBP19.48■□□□□ 0.71
CLSTN3-202ENST00000331148 PECAM1P16284 738 aaPredicted RBP19.48■□□□□ 0.71
CLSTN3-202ENST00000331148 FERP16591 822 aa19.48■□□□□ 0.71
CLSTN3-202ENST00000331148 VCAM1P19320 739 aa19.48■□□□□ 0.71
CLSTN3-202ENST00000331148 SKIV2L2P42285 1042 aaKnown RBP19.48■□□□□ 0.71
CLSTN3-202ENST00000331148 CTCFP49711 727 aaPredicted RBP19.48■□□□□ 0.71
CLSTN3-202ENST00000331148 CLUL1Q15846 466 aa19.48■□□□□ 0.71
CLSTN3-202ENST00000331148 TRIM7Q9C029 511 aa19.48■□□□□ 0.71
CLSTN3-202ENST00000331148 EIF4E1BA6NMX2 242 aaKnown RBP19.47■□□□□ 0.71
CLSTN3-202ENST00000331148 PLA2G4BP0C869 781 aa19.47■□□□□ 0.71
CLSTN3-202ENST00000331148 RARGP13631 454 aa19.47■□□□□ 0.71
CLSTN3-202ENST00000331148 NBPF20Q3BBV1 942 aa19.47■□□□□ 0.71
CLSTN3-202ENST00000331148 VSTM1Q6UX27 236 aa19.47■□□□□ 0.71
CLSTN3-202ENST00000331148 OTUD6AQ7L8S5 288 aa19.47■□□□□ 0.71
CLSTN3-202ENST00000331148 GJA10Q969M2 543 aa19.47■□□□□ 0.71
CLSTN3-202ENST00000331148 HIP1RO75146 1068 aa19.46■□□□□ 0.71
CLSTN3-202ENST00000331148 GNAZP19086 355 aa19.46■□□□□ 0.71
CLSTN3-202ENST00000331148 CHRNA3P32297 505 aa19.46■□□□□ 0.71
CLSTN3-202ENST00000331148 ADCY7P51828 1080 aa19.46■□□□□ 0.71
CLSTN3-202ENST00000331148 HYIQ5T013 277 aa19.46■□□□□ 0.71
CLSTN3-202ENST00000331148 TRIM68Q6AZZ1 485 aa19.46■□□□□ 0.71
CLSTN3-202ENST00000331148 MAEAQ7L5Y9 396 aa19.46■□□□□ 0.71
CLSTN3-202ENST00000331148 GLYCTKQ8IVS8 523 aa19.46■□□□□ 0.71
CLSTN3-202ENST00000331148 CTNNBL1Q8WYA6 563 aaPredicted RBP19.46■□□□□ 0.71
CLSTN3-202ENST00000331148 HAS1Q92839 578 aa19.46■□□□□ 0.71
CLSTN3-202ENST00000331148 RAB3IPQ96QF0 476 aaPredicted RBP19.46■□□□□ 0.71
CLSTN3-202ENST00000331148 ROPN1BQ9BZX4 212 aaPredicted RBP19.46■□□□□ 0.71
CLSTN3-202ENST00000331148 ROPN1Q9HAT0 212 aaPredicted RBP19.46■□□□□ 0.71
CLSTN3-202ENST00000331148 GCNT4Q9P109 453 aa19.46■□□□□ 0.71
CLSTN3-202ENST00000331148 NKX1-2Q9UD57 310 aaPredicted RBP19.46■□□□□ 0.71
CLSTN3-202ENST00000331148 PCDHA3Q9Y5H8 950 aa19.46■□□□□ 0.71
CLSTN3-202ENST00000331148 KDM3AQ9Y4C1 1321 aa19.46■□□□□ 0.71
CLSTN3-202ENST00000331148 NEFHP12036 1026 aa19.46■□□□□ 0.71
CLSTN3-202ENST00000331148 ABCB4P21439 1286 aa19.46■□□□□ 0.71
CLSTN3-202ENST00000331148 CASP5P51878 434 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms