RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 TAF11Q15544 211 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 SLFN11Q7Z7L1 901 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 EXOC3L1Q86VI1 746 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 CATSPER3Q86XQ3 398 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 WDR75Q8IWA0 830 aaKnown RBP8.48□□□□□ -1.05
VMA21-201ENST00000330374 MAGEC3Q8TD91 643 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 ELMO3Q96BJ8 720 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 ACP6Q9NPH0 428 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 SLAIN2Q9P270 581 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 G3BP2Q9UN86 482 aaKnown RBP8.48□□□□□ -1.05
VMA21-201ENST00000330374 DNM3Q9UQ16 869 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 LACTBP83111 547 aaPredicted RBP8.48□□□□□ -1.05
VMA21-201ENST00000330374 ADCY2Q08462 1091 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 CTTNQ14247 550 aaKnown RBP8.48□□□□□ -1.05
VMA21-201ENST00000330374 NFIXQ14938 502 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 USH1GQ495M9 461 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 FRMD5Q7Z6J6 570 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 FAM186BQ8IYM0 893 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 C1orf54Q8WWF1 131 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 RMDN2Q96LZ7 410 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 ETNK1Q9HBU6 452 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 RGL1Q9NZL6 768 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.48□□□□□ -1.05
VMA21-201ENST00000330374 AFF2P51816 1311 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 ANKRD36CQ5JPF3 1778 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 BTNL10A8MVZ5 291 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 ZBTB39O15060 712 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 DLATP10515 647 aaKnown RBP8.48□□□□□ -1.05
VMA21-201ENST00000330374 SOX5P35711 763 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 COPS2P61201 443 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 IKQ13123 557 aaPredicted RBP8.48□□□□□ -1.05
VMA21-201ENST00000330374 GIT2Q14161 759 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 TAOK1Q7L7X3 1001 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 MYCT1Q8N699 235 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 FITM2Q8N6M3 262 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 PRELID2Q8N945 189 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 PGM2Q96G03 612 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 TMEM237Q96Q45 408 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 MXD3Q9BW11 206 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 GRHL1Q9NZI5 618 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 ASIC3Q9UHC3 531 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 KDM3AQ9Y4C1 1321 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 RIPK2O43353 540 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 SPOPO43791 374 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 AGTP01019 485 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 POLD1P28340 1107 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 STX2P32856 288 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 MSH2P43246 934 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 ATP11AP98196 1134 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 EDRF1Q3B7T1 1238 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 DPY19L2P1Q6NXN4 242 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 CAPN12Q6ZSI9 719 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 ARHGAP27Q6ZUM4 889 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 ZDHHC14Q8IZN3 488 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 CENPTQ96BT3 561 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 NAP1L3Q99457 506 aaPredicted RBP8.48□□□□□ -1.05
VMA21-201ENST00000330374 TXLNGYQ9BZA5 131 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 RIOX1Q9H6W3 641 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 EBF2Q9HAK2 575 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 HOMER3Q9NSC5 361 aa8.48□□□□□ -1.05
VMA21-201ENST00000330374 CFAP73A6NFT4 308 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 SESN3P58005 492 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 SARNPP82979 210 aaKnown RBP8.47□□□□□ -1.05
VMA21-201ENST00000330374 CALCOCO2Q13137 446 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 ZNF449Q6P9G9 518 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 SRRM1Q8IYB3 904 aaKnown RBP8.47□□□□□ -1.05
VMA21-201ENST00000330374 WDR66Q8TBY9 1149 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 ANKRD2Q9GZV1 360 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 FTLP02792 175 aaPredicted RBP8.47□□□□□ -1.05
VMA21-201ENST00000330374 GSTA1P08263 222 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 NUDT17P0C025 328 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 LMNB1P20700 586 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 RPL13P26373 211 aaKnown RBP8.47□□□□□ -1.05
VMA21-201ENST00000330374 PRKCIP41743 596 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 SEPT2Q15019 361 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 KYNUQ16719 465 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 CBWD6Q4V339 395 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 CBWD3Q5JTY5 395 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 CBWD5Q5RIA9 395 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 HP1BP3Q5SSJ5 553 aaPredicted RBP8.47□□□□□ -1.05
VMA21-201ENST00000330374 SEL1L2Q5TEA6 688 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 C16orf86Q6ZW13 317 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 SPATA21Q7Z572 469 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 PARD3BQ8TEW8 1205 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 L3MBTL3Q96JM7 780 aaPredicted RBP8.47□□□□□ -1.05
VMA21-201ENST00000330374 TGS1Q96RS0 853 aaKnown RBP8.47□□□□□ -1.05
VMA21-201ENST00000330374 SETDB2Q96T68 719 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 DLEC1Q9Y238 1755 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 FAM196BA6NMK8 535 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 FOXN3O00409 490 aaPredicted RBP8.47□□□□□ -1.05
VMA21-201ENST00000330374 BRAFP15056 766 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 SLC12A3P55017 1021 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 GSTO1P78417 241 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 ANKRD20A2Q5SQ80 823 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 THEMIS2Q5TEJ8 643 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 ANKRD20A1Q5TYW2 823 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 ANKRD20A3Q5VUR7 823 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 VSIG1Q86XK7 387 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 ARMC2Q8NEN0 867 aa8.47□□□□□ -1.05
VMA21-201ENST00000330374 ATG4AQ8WYN0 398 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms