RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 UBE2TQ9NPD8 197 aaPredicted RBP15.73■□□□□ 0.11
SSBP3-201ENST00000326956 ABCF3Q9NUQ8 709 aa15.73■□□□□ 0.11
SSBP3-201ENST00000326956 WNK3Q9BYP7 1800 aa15.73■□□□□ 0.11
SSBP3-201ENST00000326956 RIMBP2O15034 1052 aa15.72■□□□□ 0.11
SSBP3-201ENST00000326956 ATP5DP30049 168 aa15.72■□□□□ 0.11
SSBP3-201ENST00000326956 CRYMQ14894 314 aa15.72■□□□□ 0.11
SSBP3-201ENST00000326956 LRRC14Q15048 493 aa15.72■□□□□ 0.11
SSBP3-201ENST00000326956 PPP2R5AQ15172 486 aa15.72■□□□□ 0.11
SSBP3-201ENST00000326956 CHADLQ6NUI6 762 aa15.72■□□□□ 0.11
SSBP3-201ENST00000326956 C11orf63Q6NUN7 778 aa15.72■□□□□ 0.11
SSBP3-201ENST00000326956 OTUD6AQ7L8S5 288 aa15.72■□□□□ 0.11
SSBP3-201ENST00000326956 GGT7Q9UJ14 662 aa15.72■□□□□ 0.11
SSBP3-201ENST00000326956 USP15Q9Y4E8 981 aaPredicted RBP15.72■□□□□ 0.11
SSBP3-201ENST00000326956 EEF2P13639 858 aaKnown RBP15.72■□□□□ 0.11
SSBP3-201ENST00000326956 RFX1P22670 979 aa15.72■□□□□ 0.11
SSBP3-201ENST00000326956 AUHQ13825 339 aaKnown RBP15.72■□□□□ 0.11
SSBP3-201ENST00000326956 CNGA2Q16280 664 aa15.72■□□□□ 0.11
SSBP3-201ENST00000326956 FAM98CQ17RN3 349 aaKnown RBP15.72■□□□□ 0.11
SSBP3-201ENST00000326956 ODR4Q5SWX8 454 aa15.72■□□□□ 0.11
SSBP3-201ENST00000326956 HOOK2Q96ED9 719 aa15.72■□□□□ 0.11
SSBP3-201ENST00000326956 IFT74Q96LB3 600 aa15.72■□□□□ 0.11
SSBP3-201ENST00000326956 TMEM109Q9BVC6 243 aa15.72■□□□□ 0.11
SSBP3-201ENST00000326956 ROPN1BQ9BZX4 212 aaPredicted RBP15.72■□□□□ 0.11
SSBP3-201ENST00000326956 CCDC134Q9H6E4 229 aa15.72■□□□□ 0.11
SSBP3-201ENST00000326956 ROPN1Q9HAT0 212 aaPredicted RBP15.72■□□□□ 0.11
SSBP3-201ENST00000326956 SNX3O60493 162 aa15.71■□□□□ 0.11
SSBP3-201ENST00000326956 UBOX5O94941 541 aa15.71■□□□□ 0.11
SSBP3-201ENST00000326956 COMTP21964 271 aa15.71■□□□□ 0.11
SSBP3-201ENST00000326956 SREBF1P36956 1147 aa15.71■□□□□ 0.11
SSBP3-201ENST00000326956 MARCKSL1P49006 195 aa15.71■□□□□ 0.11
SSBP3-201ENST00000326956 KIF22Q14807 665 aa15.71■□□□□ 0.11
SSBP3-201ENST00000326956 NUGGCQ68CJ6 796 aa15.71■□□□□ 0.11
SSBP3-201ENST00000326956 CRELD2Q6UXH1 353 aaPredicted RBP15.71■□□□□ 0.11
SSBP3-201ENST00000326956 GBP7Q8N8V2 638 aaPredicted RBP15.71■□□□□ 0.11
SSBP3-201ENST00000326956 ANKRD42Q8N9B4 389 aa15.71■□□□□ 0.11
SSBP3-201ENST00000326956 SLC20A1Q8WUM9 679 aa15.71■□□□□ 0.11
SSBP3-201ENST00000326956 ARHGEF2Q92974 986 aaKnown RBP15.71■□□□□ 0.11
SSBP3-201ENST00000326956 KLHL29Q96CT2 875 aa15.71■□□□□ 0.11
SSBP3-201ENST00000326956 WNT8AQ9H1J5 351 aa15.71■□□□□ 0.11
SSBP3-201ENST00000326956 ECT2Q9H8V3 914 aa15.71■□□□□ 0.11
SSBP3-201ENST00000326956 AGPAT3Q9NRZ7 376 aa15.71■□□□□ 0.11
SSBP3-201ENST00000326956 AFF2P51816 1311 aa15.71■□□□□ 0.11
SSBP3-201ENST00000326956 ARFGEF1Q9Y6D6 1849 aa15.71■□□□□ 0.11
SSBP3-201ENST00000326956 TCP11X1B4DZS4 312 aa15.71■□□□□ 0.11
SSBP3-201ENST00000326956 EML1O00423 815 aa15.71■□□□□ 0.11
SSBP3-201ENST00000326956 ACSL3O95573 720 aa15.71■□□□□ 0.11
SSBP3-201ENST00000326956 HOXA13P31271 388 aaPredicted RBP15.71■□□□□ 0.11
SSBP3-201ENST00000326956 COILP38432 576 aaPredicted RBP15.71■□□□□ 0.11
SSBP3-201ENST00000326956 SCNN1DP51172 638 aa15.71■□□□□ 0.11
SSBP3-201ENST00000326956 RIPK1Q13546 671 aa15.71■□□□□ 0.11
SSBP3-201ENST00000326956 ZNF746Q6NUN9 644 aaPredicted RBP15.71■□□□□ 0.11
SSBP3-201ENST00000326956 TBC1D16Q8TBP0 767 aa15.71■□□□□ 0.11
SSBP3-201ENST00000326956 LENG9Q96B70 501 aa15.71■□□□□ 0.11
SSBP3-201ENST00000326956 STAMBPL1Q96FJ0 436 aa15.71■□□□□ 0.11
SSBP3-201ENST00000326956 FGFR1OP2Q9NVK5 253 aa15.71■□□□□ 0.11
SSBP3-201ENST00000326956 SEL1LQ9UBV2 794 aa15.71■□□□□ 0.11
SSBP3-201ENST00000326956 KDM4FA0A1W2PPD8 638 aa15.71■□□□□ 0.1
SSBP3-201ENST00000326956 ECEL1O95672 775 aa15.71■□□□□ 0.1
SSBP3-201ENST00000326956 NQO1P15559 274 aaKnown RBP15.71■□□□□ 0.1
SSBP3-201ENST00000326956 BFSP1Q12934 665 aa15.71■□□□□ 0.1
SSBP3-201ENST00000326956 LONRF1Q17RB8 773 aa15.71■□□□□ 0.1
SSBP3-201ENST00000326956 TTC27Q6P3X3 843 aa15.71■□□□□ 0.1
SSBP3-201ENST00000326956 TEX2Q8IWB9 1127 aa15.71■□□□□ 0.1
SSBP3-201ENST00000326956 RPUSD2Q8IZ73 545 aaKnown RBP15.71■□□□□ 0.1
SSBP3-201ENST00000326956 BANK1Q8NDB2 785 aa15.71■□□□□ 0.1
SSBP3-201ENST00000326956 DYDC2Q96IM9 177 aa15.71■□□□□ 0.1
SSBP3-201ENST00000326956 RPS6KC1Q96S38 1066 aa15.71■□□□□ 0.1
SSBP3-201ENST00000326956 SYT11Q9BT88 431 aa15.71■□□□□ 0.1
SSBP3-201ENST00000326956 PLVAPQ9BX97 442 aa15.71■□□□□ 0.1
SSBP3-201ENST00000326956 MTFR1LQ9H019 292 aa15.71■□□□□ 0.1
SSBP3-201ENST00000326956 POLLQ9UGP5 575 aa15.71■□□□□ 0.1
SSBP3-201ENST00000326956 SBF2Q86WG5 1849 aa15.7■□□□□ 0.1
SSBP3-201ENST00000326956 CTNNA2P26232 953 aa15.7■□□□□ 0.1
SSBP3-201ENST00000326956 KCNJ1P48048 391 aa15.7■□□□□ 0.1
SSBP3-201ENST00000326956 NFIL3Q16649 462 aa15.7■□□□□ 0.1
SSBP3-201ENST00000326956 ACCSLQ4AC99 568 aa15.7■□□□□ 0.1
SSBP3-201ENST00000326956 PHLDB3Q6NSJ2 640 aa15.7■□□□□ 0.1
SSBP3-201ENST00000326956 TRMT10CQ7L0Y3 403 aaKnown RBP15.7■□□□□ 0.1
SSBP3-201ENST00000326956 CYFIP1Q7L576 1253 aa15.7■□□□□ 0.1
SSBP3-201ENST00000326956 KCTD17Q8N5Z5 321 aa15.7■□□□□ 0.1
SSBP3-201ENST00000326956 OLIG1Q8TAK6 271 aa15.7■□□□□ 0.1
SSBP3-201ENST00000326956 CYP2W1Q8TAV3 490 aa15.7■□□□□ 0.1
SSBP3-201ENST00000326956 NSMCE1Q8WV22 266 aa15.7■□□□□ 0.1
SSBP3-201ENST00000326956 THOC1Q96FV9 657 aaKnown RBP15.7■□□□□ 0.1
SSBP3-201ENST00000326956 PLCD4Q9BRC7 762 aa15.7■□□□□ 0.1
SSBP3-201ENST00000326956 GPR88Q9GZN0 384 aa15.7■□□□□ 0.1
SSBP3-201ENST00000326956 ASIC3Q9UHC3 531 aa15.7■□□□□ 0.1
SSBP3-201ENST00000326956 CHORDC1Q9UHD1 332 aaPredicted RBP15.7■□□□□ 0.1
SSBP3-201ENST00000326956 FRMPD4Q14CM0 1322 aa15.7■□□□□ 0.1
SSBP3-201ENST00000326956 ZMYM2Q9UBW7 1377 aa15.7■□□□□ 0.1
SSBP3-201ENST00000326956 G3V3G9 751 aa15.7■□□□□ 0.1
SSBP3-201ENST00000326956 HADHBP55084 474 aaKnown RBP15.7■□□□□ 0.1
SSBP3-201ENST00000326956 SLC15A2Q16348 729 aa15.7■□□□□ 0.1
SSBP3-201ENST00000326956 DCAF8Q5TAQ9 597 aa15.7■□□□□ 0.1
SSBP3-201ENST00000326956 LRCH2Q5VUJ6 765 aa15.7■□□□□ 0.1
SSBP3-201ENST00000326956 ZNF720Q7Z2F6 126 aa15.7■□□□□ 0.1
SSBP3-201ENST00000326956 MORC4Q8TE76 937 aa15.7■□□□□ 0.1
SSBP3-201ENST00000326956 VTI1AQ96AJ9 217 aa15.7■□□□□ 0.1
SSBP3-201ENST00000326956 NOP53Q9NZM5 478 aaKnown RBP15.7■□□□□ 0.1
SSBP3-201ENST00000326956 VAV3Q9UKW4 847 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms