RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 CHCHD3Q9NX63 227 aaKnown RBP8.38□□□□□ -1.07
CIITA-201ENST00000324288 SUN2Q9UH99 717 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 DBR1Q9UK59 544 aaKnown RBP8.38□□□□□ -1.07
CIITA-201ENST00000324288 XPOTO43592 962 aaKnown RBP8.38□□□□□ -1.07
CIITA-201ENST00000324288 CDC37Q16543 378 aaPredicted RBP8.38□□□□□ -1.07
CIITA-201ENST00000324288 FASTKD1Q53R41 847 aaKnown RBP8.38□□□□□ -1.07
CIITA-201ENST00000324288 CASS4Q9NQ75 786 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 BRAFP15056 766 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 SERPINB1P30740 379 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 CRKLP46109 303 aaKnown RBP8.38□□□□□ -1.07
CIITA-201ENST00000324288 RESTQ13127 1097 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 PDIK1LQ8N165 341 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 CCT8L2Q96SF2 557 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 AGRPO00253 132 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 TEX33O43247 280 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 FOSL2P15408 326 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 USP14P54578 494 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 TRIM16LQ309B1 348 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 IL31Q6EBC2 164 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 PDXDC1Q6P996 788 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 CCDC81Q6ZN84 652 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 TAS2R42Q7RTR8 314 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 THNSL1Q8IYQ7 743 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 RUBCNLQ9H714 662 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 STMN3Q9NZ72 180 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 MAST1Q9Y2H9 1570 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 H0Y626 953 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 TRIM16O95361 564 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 ENO3P13929 434 aaPredicted RBP8.38□□□□□ -1.07
CIITA-201ENST00000324288 GALNT17Q6IS24 598 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 LCORLQ8N3X6 602 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 SLC40A1Q9NP59 571 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 GID8Q9NWU2 228 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 TRIM33Q9UPN9 1127 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 PWP1Q13610 501 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 ASPRV1Q53RT3 343 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 CNKSR1Q969H4 720 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 OMA1Q96E52 524 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 PARVGQ9HBI0 331 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 CCDC78A2IDD5 438 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 GCFC2P16383 781 aaKnown RBP8.38□□□□□ -1.07
CIITA-201ENST00000324288 ERFEQ4G0M1 354 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 PDXDC2PQ6P474 469 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 ZBTB38Q8NAP3 1195 aaPredicted RBP8.38□□□□□ -1.07
CIITA-201ENST00000324288 RIN2Q8WYP3 895 aaPredicted RBP8.38□□□□□ -1.07
CIITA-201ENST00000324288 OSBPL10Q9BXB5 764 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 EPN3Q9H201 632 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 ASXL2Q76L83 1435 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 ZNF233A6NK53 670 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 ZCCHC18P0CG32 403 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 PTK2BQ14289 1009 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 ERICH1Q86X53 443 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 IFT43Q96FT9 208 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 ADAMTS1Q9UHI8 967 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 TPP2P29144 1249 aaPredicted RBP8.38□□□□□ -1.07
CIITA-201ENST00000324288 NME3Q13232 169 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 SH3KBP1Q96B97 665 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 IKBKBO14920 756 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 PSAPP07602 524 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 MRPL47Q9HD33 250 aaKnown RBP8.38□□□□□ -1.07
CIITA-201ENST00000324288 CYLDQ9NQC7 956 aa8.38□□□□□ -1.07
CIITA-201ENST00000324288 ACCSLQ4AC99 568 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 ADORA2BP29275 332 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 MTF1Q14872 753 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 SLFNL1Q499Z3 407 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 CC2D2BQ6DHV5 1058 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 EGFL8Q99944 293 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 USP44Q9H0E7 712 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 THAP9Q9H5L6 903 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.37□□□□□ -1.07
CIITA-201ENST00000324288 MID2Q9UJV3 735 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 EDC4Q6P2E9 1401 aaKnown RBP8.37□□□□□ -1.07
CIITA-201ENST00000324288 ARHGEF10O15013 1369 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 TJAP1Q5JTD0 557 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 STAMBPL1Q96FJ0 436 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 EXOSC4Q9NPD3 245 aaKnown RBP8.37□□□□□ -1.07
CIITA-201ENST00000324288 PBXIP1Q96AQ6 731 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 ULK4Q96C45 1275 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 NDFIP2Q9NV92 336 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 RCOR1Q9UKL0 485 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 SLC8A2Q9UPR5 921 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 ABCB11O95342 1321 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 E5RI56 91 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 DFFAO00273 331 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 DEAF1O75398 565 aaPredicted RBP8.37□□□□□ -1.07
CIITA-201ENST00000324288 EIF3BP55884 814 aaKnown RBP8.37□□□□□ -1.07
CIITA-201ENST00000324288 BTN2A2Q8WVV5 523 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 ERP27Q96DN0 273 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 NACC1Q96RE7 527 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 YIPF2Q9BWQ6 316 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 SYTL2Q9HCH5 934 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 RNF14Q9UBS8 474 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 CNOT8Q9UFF9 292 aaKnown RBP8.37□□□□□ -1.07
CIITA-201ENST00000324288 TCN1P20061 433 aaPredicted RBP8.37□□□□□ -1.07
CIITA-201ENST00000324288 CATSPER4Q7RTX7 472 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 AKIRIN2Q53H80 203 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 TMEM270Q6UE05 265 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 EPAS1Q99814 870 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 EMILIN3Q9NT22 766 aa8.37□□□□□ -1.07
CIITA-201ENST00000324288 UTP6Q9NYH9 597 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms