RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 UTP11Q9Y3A2 253 aaKnown RBP13.16□□□□□ -0.3
SEC24A-201ENST00000322887 A6NNZ2 444 aa13.15□□□□□ -0.3
SEC24A-201ENST00000322887 MGRN1O60291 552 aa13.15□□□□□ -0.3
SEC24A-201ENST00000322887 AKR1B1P15121 316 aa13.15□□□□□ -0.3
SEC24A-201ENST00000322887 DR1Q01658 176 aa13.15□□□□□ -0.3
SEC24A-201ENST00000322887 TCP10Q12799 353 aa13.15□□□□□ -0.3
SEC24A-201ENST00000322887 LONRF1Q17RB8 773 aa13.15□□□□□ -0.3
SEC24A-201ENST00000322887 TUBB8Q3ZCM7 444 aa13.15□□□□□ -0.3
SEC24A-201ENST00000322887 GALNT17Q6IS24 598 aa13.15□□□□□ -0.3
SEC24A-201ENST00000322887 TTC27Q6P3X3 843 aa13.15□□□□□ -0.3
SEC24A-201ENST00000322887 ZDHHC24Q6UX98 284 aa13.15□□□□□ -0.3
SEC24A-201ENST00000322887 CCDC197Q8NCU1 140 aa13.15□□□□□ -0.3
SEC24A-201ENST00000322887 SLC17A8Q8NDX2 589 aa13.15□□□□□ -0.3
SEC24A-201ENST00000322887 ADAM33Q9BZ11 813 aa13.15□□□□□ -0.3
SEC24A-201ENST00000322887 ACTR5Q9H9F9 607 aaPredicted RBP13.15□□□□□ -0.3
SEC24A-201ENST00000322887 EVI5O60447 810 aa13.15□□□□□ -0.3
SEC24A-201ENST00000322887 H2AFZP0C0S5 128 aa13.15□□□□□ -0.3
SEC24A-201ENST00000322887 BIRC3Q13489 604 aa13.15□□□□□ -0.3
SEC24A-201ENST00000322887 PLS1Q14651 629 aa13.15□□□□□ -0.3
SEC24A-201ENST00000322887 H2AFVQ71UI9 128 aa13.15□□□□□ -0.3
SEC24A-201ENST00000322887 ANKRD42Q8N9B4 389 aa13.15□□□□□ -0.3
SEC24A-201ENST00000322887 CCDC63Q8NA47 563 aa13.15□□□□□ -0.3
SEC24A-201ENST00000322887 CYP2W1Q8TAV3 490 aa13.15□□□□□ -0.3
SEC24A-201ENST00000322887 TLCD1Q96CP7 247 aa13.15□□□□□ -0.3
SEC24A-201ENST00000322887 CSRNP1Q96S65 589 aa13.15□□□□□ -0.3
SEC24A-201ENST00000322887 REEP2Q9BRK0 252 aa13.15□□□□□ -0.3
SEC24A-201ENST00000322887 FAM167BQ9BTA0 163 aa13.15□□□□□ -0.3
SEC24A-201ENST00000322887 NMRK2Q9NPI5 230 aa13.15□□□□□ -0.3
SEC24A-201ENST00000322887 LUC7LQ9NQ29 371 aaKnown RBP13.15□□□□□ -0.3
SEC24A-201ENST00000322887 ZDHHC18Q9NUE0 388 aa13.15□□□□□ -0.3
SEC24A-201ENST00000322887 FGFR1OP2Q9NVK5 253 aa13.15□□□□□ -0.3
SEC24A-201ENST00000322887 ARMCX3Q9UH62 379 aaPredicted RBP13.15□□□□□ -0.3
SEC24A-201ENST00000322887 RPTORQ8N122 1335 aa13.15□□□□□ -0.3
SEC24A-201ENST00000322887 EME2A4GXA9 379 aaPredicted RBP13.14□□□□□ -0.31
SEC24A-201ENST00000322887 CETN3O15182 167 aa13.14□□□□□ -0.31
SEC24A-201ENST00000322887 DDX3YO15523 660 aaKnown RBP13.14□□□□□ -0.31
SEC24A-201ENST00000322887 EZRP15311 586 aaKnown RBP13.14□□□□□ -0.31
SEC24A-201ENST00000322887 GCFC2P16383 781 aaKnown RBP13.14□□□□□ -0.31
SEC24A-201ENST00000322887 RPL21P46778 160 aaKnown RBP13.14□□□□□ -0.31
SEC24A-201ENST00000322887 CCNHP51946 323 aaPredicted RBP13.14□□□□□ -0.31
SEC24A-201ENST00000322887 PLCB4Q15147 1175 aa13.14□□□□□ -0.31
SEC24A-201ENST00000322887 SUPT20HL1Q3ZLR7 823 aa13.14□□□□□ -0.31
SEC24A-201ENST00000322887 ADGRF4Q8IZF3 695 aa13.14□□□□□ -0.31
SEC24A-201ENST00000322887 SYN2Q92777 582 aaPredicted RBP13.14□□□□□ -0.31
SEC24A-201ENST00000322887 PBKQ96KB5 322 aa13.14□□□□□ -0.31
SEC24A-201ENST00000322887 TMEM39BQ9GZU3 492 aa13.14□□□□□ -0.31
SEC24A-201ENST00000322887 ANP32DO95626 131 aa13.14□□□□□ -0.31
SEC24A-201ENST00000322887 CALCAP01258 141 aa13.14□□□□□ -0.31
SEC24A-201ENST00000322887 PPP1R2P41236 205 aa13.14□□□□□ -0.31
SEC24A-201ENST00000322887 PMS2P54278 862 aa13.14□□□□□ -0.31
SEC24A-201ENST00000322887 KLRC3Q07444 240 aa13.14□□□□□ -0.31
SEC24A-201ENST00000322887 EPHA7Q15375 998 aa13.14□□□□□ -0.31
SEC24A-201ENST00000322887 TRMT1LQ7Z2T5 733 aaKnown RBP13.14□□□□□ -0.31
SEC24A-201ENST00000322887 PRUNE1Q86TP1 453 aa13.14□□□□□ -0.31
SEC24A-201ENST00000322887 SLC20A1Q8WUM9 679 aa13.14□□□□□ -0.31
SEC24A-201ENST00000322887 RUSC1Q9BVN2 902 aa13.14□□□□□ -0.31
SEC24A-201ENST00000322887 JMJD4Q9H9V9 463 aa13.14□□□□□ -0.31
SEC24A-201ENST00000322887 BHMG1C9JSJ3 638 aaPredicted RBP13.13□□□□□ -0.31
SEC24A-201ENST00000322887 DIAPH2O60879 1101 aa13.13□□□□□ -0.31
SEC24A-201ENST00000322887 AFPP02771 609 aaKnown RBP13.13□□□□□ -0.31
SEC24A-201ENST00000322887 ALDH5A1P51649 535 aaPredicted RBP13.13□□□□□ -0.31
SEC24A-201ENST00000322887 TRIP13Q15645 432 aaPredicted RBP13.13□□□□□ -0.31
SEC24A-201ENST00000322887 EAPPQ56P03 285 aaPredicted RBP13.13□□□□□ -0.31
SEC24A-201ENST00000322887 AGBL2Q5U5Z8 902 aa13.13□□□□□ -0.31
SEC24A-201ENST00000322887 TATDN1Q6P1N9 297 aa13.13□□□□□ -0.31
SEC24A-201ENST00000322887 PIGOQ8TEQ8 1089 aa13.13□□□□□ -0.31
SEC24A-201ENST00000322887 CUL5Q93034 780 aa13.13□□□□□ -0.31
SEC24A-201ENST00000322887 IQCDQ96DY2 449 aa13.13□□□□□ -0.31
SEC24A-201ENST00000322887 HES6Q96HZ4 224 aa13.13□□□□□ -0.31
SEC24A-201ENST00000322887 ZNF570Q96NI8 536 aa13.13□□□□□ -0.31
SEC24A-201ENST00000322887 FAM118BQ9BPY3 351 aa13.13□□□□□ -0.31
SEC24A-201ENST00000322887 GPBP1L1Q9HC44 474 aaPredicted RBP13.13□□□□□ -0.31
SEC24A-201ENST00000322887 INTS9Q9NV88 658 aaKnown RBP13.13□□□□□ -0.31
SEC24A-201ENST00000322887 SIPA1L1O43166 1804 aa13.13□□□□□ -0.31
SEC24A-201ENST00000322887 ACSL3O95573 720 aa13.13□□□□□ -0.31
SEC24A-201ENST00000322887 KRT16P08779 473 aa13.13□□□□□ -0.31
SEC24A-201ENST00000322887 XRCC5P13010 732 aaKnown RBP13.13□□□□□ -0.31
SEC24A-201ENST00000322887 NMT1P30419 496 aaKnown RBP13.13□□□□□ -0.31
SEC24A-201ENST00000322887 PHLDB2Q86SQ0 1253 aa13.13□□□□□ -0.31
SEC24A-201ENST00000322887 ERICH1Q86X53 443 aa13.13□□□□□ -0.31
SEC24A-201ENST00000322887 CATSPER3Q86XQ3 398 aa13.13□□□□□ -0.31
SEC24A-201ENST00000322887 JAMLQ86YT9 394 aa13.13□□□□□ -0.31
SEC24A-201ENST00000322887 TXLNGYQ9BZA5 131 aa13.13□□□□□ -0.31
SEC24A-201ENST00000322887 EDEM3Q9BZQ6 932 aa13.13□□□□□ -0.31
SEC24A-201ENST00000322887 GINM1Q9NU53 330 aa13.13□□□□□ -0.31
SEC24A-201ENST00000322887 RGL1Q9NZL6 768 aa13.13□□□□□ -0.31
SEC24A-201ENST00000322887 ABCB11O95342 1321 aa13.13□□□□□ -0.31
SEC24A-201ENST00000322887 TISP43B9A030 160 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 IGF2BP3O00425 579 aaKnown RBP eCLIP13.12□□□□□ -0.31
SEC24A-201ENST00000322887 RGS16O15492 202 aaPredicted RBP13.12□□□□□ -0.31
SEC24A-201ENST00000322887 PPFIA2O75334 1257 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 CBWD6Q4V339 395 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 LACTB2Q53H82 288 aaPredicted RBP13.12□□□□□ -0.31
SEC24A-201ENST00000322887 PRR16Q569H4 304 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 CBWD3Q5JTY5 395 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 CBWD5Q5RIA9 395 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 DAB2IPQ5VWQ8 1189 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 DCAF15Q66K64 600 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 CCDC65Q8IXS2 484 aa13.12□□□□□ -0.31
SEC24A-201ENST00000322887 SLC35C1Q96A29 364 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms