RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 PLAGL2Q9UPG8 496 aa16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 SRPRBQ9Y5M8 271 aaKnown RBP16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 CNTNAP2Q9UHC6 1331 aa16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 B4GALT5O43286 388 aa16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 ZSCAN22P10073 491 aaPredicted RBP16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 LIG1P18858 919 aa16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 GUCY2CP25092 1073 aa16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 TXLNAP40222 546 aa16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 EFNA5P52803 228 aa16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 PEX3P56589 373 aa16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 DMP1Q13316 513 aaPredicted RBP16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 SLC39A14Q15043 492 aa16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 KARSQ15046 597 aaKnown RBP16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 STK38Q15208 465 aa16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 THNSL1Q8IYQ7 743 aa16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 HACE1Q8IYU2 909 aa16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 COLGALT1Q8NBJ5 622 aa16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 KIFC3Q9BVG8 833 aa16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 FZD8Q9H461 694 aa16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 CWH43Q9H720 699 aa16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 ALG13Q9NP73 1137 aaKnown RBP16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 THEGQ9P2T0 379 aa16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 HCSTQ9UBK5 93 aa16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 FBXO2Q9UK22 296 aaPredicted RBP16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 INPP5FQ9Y2H2 1132 aa16.19■□□□□ 0.18
TUBA3D-201ENST00000321253 PRUNE2Q8WUY3 3088 aa16.18■□□□□ 0.18
TUBA3D-201ENST00000321253 CCDC169A6NNP5 214 aa16.18■□□□□ 0.18
TUBA3D-201ENST00000321253 CSPG5O95196 566 aa16.18■□□□□ 0.18
TUBA3D-201ENST00000321253 ITGB1P05556 798 aa16.18■□□□□ 0.18
TUBA3D-201ENST00000321253 PRKCBP05771 671 aa16.18■□□□□ 0.18
TUBA3D-201ENST00000321253 ITGA4P13612 1032 aa16.18■□□□□ 0.18
TUBA3D-201ENST00000321253 PLCG1P19174 1290 aa16.18■□□□□ 0.18
TUBA3D-201ENST00000321253 NCLP19338 710 aaKnown RBP16.18■□□□□ 0.18
TUBA3D-201ENST00000321253 SLC12A3P55017 1021 aa16.18■□□□□ 0.18
TUBA3D-201ENST00000321253 RNASELQ05823 741 aaKnown RBP16.18■□□□□ 0.18
TUBA3D-201ENST00000321253 PRPF4BQ13523 1007 aaKnown RBP16.18■□□□□ 0.18
TUBA3D-201ENST00000321253 FAM187BQ17R55 369 aa16.18■□□□□ 0.18
TUBA3D-201ENST00000321253 NOMO2Q5JPE7 1267 aa16.18■□□□□ 0.18
TUBA3D-201ENST00000321253 SLC27A1Q6PCB7 646 aa16.18■□□□□ 0.18
TUBA3D-201ENST00000321253 LRRC55Q6ZSA7 311 aa16.18■□□□□ 0.18
TUBA3D-201ENST00000321253 MRPL10Q7Z7H8 261 aaKnown RBP16.18■□□□□ 0.18
TUBA3D-201ENST00000321253 KRI1Q8N9T8 703 aaKnown RBP16.18■□□□□ 0.18
TUBA3D-201ENST00000321253 URGCPQ8TCY9 931 aa16.18■□□□□ 0.18
TUBA3D-201ENST00000321253 ZNF558Q96NG5 402 aa16.18■□□□□ 0.18
TUBA3D-201ENST00000321253 EIF2AQ9BY44 585 aaKnown RBP16.18■□□□□ 0.18
TUBA3D-201ENST00000321253 CCSER1Q9C0I3 900 aa16.18■□□□□ 0.18
TUBA3D-201ENST00000321253 RSAD1Q9HA92 442 aa16.18■□□□□ 0.18
TUBA3D-201ENST00000321253 C17orf75Q9HAS0 396 aa16.18■□□□□ 0.18
TUBA3D-201ENST00000321253 UBN1Q9NPG3 1134 aa16.18■□□□□ 0.18
TUBA3D-201ENST00000321253 PRDM6Q9NQX0 595 aa16.18■□□□□ 0.18
TUBA3D-201ENST00000321253 CCDC39Q9UFE4 941 aa16.18■□□□□ 0.18
TUBA3D-201ENST00000321253 IPPQ9Y573 584 aa16.18■□□□□ 0.18
TUBA3D-201ENST00000321253 A0A1B0GUA9 196 aa16.17■□□□□ 0.18
TUBA3D-201ENST00000321253 MEIS3P2A8K0S8 358 aa16.17■□□□□ 0.18
TUBA3D-201ENST00000321253 ACKR2O00590 384 aa16.17■□□□□ 0.18
TUBA3D-201ENST00000321253 F13A1P00488 732 aa16.17■□□□□ 0.18
TUBA3D-201ENST00000321253 PPM1AP35813 382 aa16.17■□□□□ 0.18
TUBA3D-201ENST00000321253 NASPP49321 788 aaPredicted RBP16.17■□□□□ 0.18
TUBA3D-201ENST00000321253 RAD51AP2Q09MP3 1159 aa16.17■□□□□ 0.18
TUBA3D-201ENST00000321253 SPECC1Q5M775 1068 aa16.17■□□□□ 0.18
TUBA3D-201ENST00000321253 AGMOQ6ZNB7 445 aa16.17■□□□□ 0.18
TUBA3D-201ENST00000321253 DAW1Q8N136 415 aa16.17■□□□□ 0.18
TUBA3D-201ENST00000321253 EPSTI1Q96J88 318 aa16.17■□□□□ 0.18
TUBA3D-201ENST00000321253 NSUN3Q9H649 340 aaKnown RBP16.17■□□□□ 0.18
TUBA3D-201ENST00000321253 KMT5AQ9NQR1 393 aa16.17■□□□□ 0.18
TUBA3D-201ENST00000321253 KCNG1Q9UIX4 513 aa16.17■□□□□ 0.18
TUBA3D-201ENST00000321253 MORC2Q9Y6X9 1032 aaPredicted RBP16.17■□□□□ 0.18
TUBA3D-201ENST00000321253 MYH15Q9Y2K3 1946 aa16.16■□□□□ 0.18
TUBA3D-201ENST00000321253 PHLPP2Q6ZVD8 1323 aa16.16■□□□□ 0.18
TUBA3D-201ENST00000321253 K7ERI5 159 aa16.16■□□□□ 0.18
TUBA3D-201ENST00000321253 N4BP3O15049 544 aa16.16■□□□□ 0.18
TUBA3D-201ENST00000321253 OFD1O75665 1012 aa16.16■□□□□ 0.18
TUBA3D-201ENST00000321253 FGF18O76093 207 aa16.16■□□□□ 0.18
TUBA3D-201ENST00000321253 NPTXRO95502 500 aa16.16■□□□□ 0.18
TUBA3D-201ENST00000321253 NPTX2P47972 431 aa16.16■□□□□ 0.18
TUBA3D-201ENST00000321253 UBE3AQ05086 875 aa16.16■□□□□ 0.18
TUBA3D-201ENST00000321253 MAPK7Q13164 816 aa16.16■□□□□ 0.18
TUBA3D-201ENST00000321253 DHX8Q14562 1220 aaKnown RBP16.16■□□□□ 0.18
TUBA3D-201ENST00000321253 KCNT2Q6UVM3 1135 aa16.16■□□□□ 0.18
TUBA3D-201ENST00000321253 CDR2LQ86X02 465 aaPredicted RBP16.16■□□□□ 0.18
TUBA3D-201ENST00000321253 SMG8Q8ND04 991 aaKnown RBP16.16■□□□□ 0.18
TUBA3D-201ENST00000321253 SPPL3Q8TCT6 385 aa16.16■□□□□ 0.18
TUBA3D-201ENST00000321253 POF1BQ8WVV4 589 aa16.16■□□□□ 0.18
TUBA3D-201ENST00000321253 RAD54LQ92698 747 aa16.16■□□□□ 0.18
TUBA3D-201ENST00000321253 SYMPKQ92797 1274 aaKnown RBP16.16■□□□□ 0.18
TUBA3D-201ENST00000321253 CLIC6Q96NY7 704 aa16.16■□□□□ 0.18
TUBA3D-201ENST00000321253 ADPGKQ9BRR6 497 aa16.16■□□□□ 0.18
TUBA3D-201ENST00000321253 APOL6Q9BWW8 343 aa16.16■□□□□ 0.18
TUBA3D-201ENST00000321253 CCDC113Q9H0I3 377 aa16.16■□□□□ 0.18
TUBA3D-201ENST00000321253 TFIP11Q9UBB9 837 aaKnown RBP16.16■□□□□ 0.18
TUBA3D-201ENST00000321253 CARNS1A5YM72 827 aa16.15■□□□□ 0.18
TUBA3D-201ENST00000321253 ZC3H11AO75152 810 aaKnown RBP eCLIP16.15■□□□□ 0.18
TUBA3D-201ENST00000321253 KRT18P05783 430 aaKnown RBP16.15■□□□□ 0.18
TUBA3D-201ENST00000321253 ALDH7A1P49419 539 aaKnown RBP16.15■□□□□ 0.18
TUBA3D-201ENST00000321253 SMTNP53814 917 aa16.15■□□□□ 0.18
TUBA3D-201ENST00000321253 BECN1Q14457 450 aa16.15■□□□□ 0.18
TUBA3D-201ENST00000321253 FOXD4L6Q3SYB3 417 aaPredicted RBP16.15■□□□□ 0.18
TUBA3D-201ENST00000321253 FOXD4L3Q6VB84 417 aaPredicted RBP16.15■□□□□ 0.18
TUBA3D-201ENST00000321253 USP49Q70CQ1 688 aa16.15■□□□□ 0.18
TUBA3D-201ENST00000321253 GPBP1Q86WP2 473 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms