RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 ISCA1Q9BUE6 129 aa8.53□□□□□ -1.04
RTL3-201ENST00000321110 CDC42EP4Q9H3Q1 356 aaKnown RBP8.53□□□□□ -1.04
RTL3-201ENST00000321110 SLCO1B3Q9NPD5 702 aa8.53□□□□□ -1.04
RTL3-201ENST00000321110 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.53□□□□□ -1.04
RTL3-201ENST00000321110 RASAL2Q9UJF2 1139 aa8.53□□□□□ -1.04
RTL3-201ENST00000321110 TBC1D30Q9Y2I9 924 aa8.53□□□□□ -1.04
RTL3-201ENST00000321110 NUP188Q5SRE5 1749 aa8.53□□□□□ -1.04
RTL3-201ENST00000321110 IGSF9BQ9UPX0 1349 aa8.53□□□□□ -1.04
RTL3-201ENST00000321110 PVALEFA0A1B0GWK0 134 aa8.52□□□□□ -1.04
RTL3-201ENST00000321110 FAM170AA1A519 330 aa8.52□□□□□ -1.04
RTL3-201ENST00000321110 A6NJR5 290 aa8.52□□□□□ -1.04
RTL3-201ENST00000321110 SNAP23O00161 211 aa8.52□□□□□ -1.04
RTL3-201ENST00000321110 DDX3XO00571 662 aaKnown RBP eCLIP8.52□□□□□ -1.04
RTL3-201ENST00000321110 PDE8BO95263 885 aa8.52□□□□□ -1.04
RTL3-201ENST00000321110 PSMG1O95456 288 aa8.52□□□□□ -1.04
RTL3-201ENST00000321110 ASLP04424 464 aa8.52□□□□□ -1.04
RTL3-201ENST00000321110 OR52Z1P0C646 297 aa8.52□□□□□ -1.04
RTL3-201ENST00000321110 CETPP11597 493 aa8.52□□□□□ -1.04
RTL3-201ENST00000321110 RPL13P26373 211 aaKnown RBP8.52□□□□□ -1.04
RTL3-201ENST00000321110 TECP42680 631 aa8.52□□□□□ -1.04
RTL3-201ENST00000321110 NPEPPSP55786 919 aa8.52□□□□□ -1.04
RTL3-201ENST00000321110 FKBP3Q00688 224 aaKnown RBP8.52□□□□□ -1.04
RTL3-201ENST00000321110 DNAJC3Q13217 504 aa8.52□□□□□ -1.04
RTL3-201ENST00000321110 PABPC4Q13310 644 aaKnown RBP eCLIP8.52□□□□□ -1.04
RTL3-201ENST00000321110 MPP3Q13368 585 aa8.52□□□□□ -1.04
RTL3-201ENST00000321110 PPP2R5EQ16537 467 aa8.52□□□□□ -1.04
RTL3-201ENST00000321110 TAF1BQ53T94 588 aaPredicted RBP8.52□□□□□ -1.04
RTL3-201ENST00000321110 DNAJC14Q6Y2X3 702 aaPredicted RBP8.52□□□□□ -1.04
RTL3-201ENST00000321110 CEP128Q6ZU80 1094 aa8.52□□□□□ -1.04
RTL3-201ENST00000321110 SV2BQ7L1I2 683 aa8.52□□□□□ -1.04
RTL3-201ENST00000321110 PROM2Q8N271 834 aa8.52□□□□□ -1.04
RTL3-201ENST00000321110 STKLD1Q8NE28 680 aa8.52□□□□□ -1.04
RTL3-201ENST00000321110 CFAP61Q8NHU2 1237 aa8.52□□□□□ -1.04
RTL3-201ENST00000321110 ART4Q93070 314 aa8.52□□□□□ -1.04
RTL3-201ENST00000321110 AK8Q96MA6 479 aa8.52□□□□□ -1.04
RTL3-201ENST00000321110 NR1H4Q96RI1 486 aaPredicted RBP8.52□□□□□ -1.04
RTL3-201ENST00000321110 ZNF184Q99676 751 aaPredicted RBP8.52□□□□□ -1.04
RTL3-201ENST00000321110 TSG101Q99816 390 aa8.52□□□□□ -1.04
RTL3-201ENST00000321110 FGFBP2Q9BYJ0 223 aa8.52□□□□□ -1.04
RTL3-201ENST00000321110 ASCC2Q9H1I8 757 aaPredicted RBP8.52□□□□□ -1.04
RTL3-201ENST00000321110 GREM2Q9H772 168 aa8.52□□□□□ -1.04
RTL3-201ENST00000321110 AAASQ9NRG9 546 aa8.52□□□□□ -1.04
RTL3-201ENST00000321110 CNNM1Q9NRU3 951 aa8.52□□□□□ -1.04
RTL3-201ENST00000321110 DDX43Q9NXZ2 648 aaKnown RBP8.52□□□□□ -1.04
RTL3-201ENST00000321110 STK32BQ9NY57 414 aa8.52□□□□□ -1.04
RTL3-201ENST00000321110 STARD13Q9Y3M8 1113 aa8.52□□□□□ -1.04
RTL3-201ENST00000321110 WASF2Q9Y6W5 498 aa8.52□□□□□ -1.04
RTL3-201ENST00000321110 C1orf167Q5SNV9 1468 aa8.52□□□□□ -1.05
RTL3-201ENST00000321110 PASKQ96RG2 1323 aa8.52□□□□□ -1.05
RTL3-201ENST00000321110 COL18A1P39060 1754 aa8.52□□□□□ -1.05
RTL3-201ENST00000321110 PLSCR1O15162 318 aa8.52□□□□□ -1.05
RTL3-201ENST00000321110 PHF2O75151 1096 aa8.52□□□□□ -1.05
RTL3-201ENST00000321110 TMCC1O94876 653 aa8.52□□□□□ -1.05
RTL3-201ENST00000321110 ITGA2BP08514 1039 aa8.52□□□□□ -1.05
RTL3-201ENST00000321110 VCAM1P19320 739 aa8.52□□□□□ -1.05
RTL3-201ENST00000321110 SLC9A1P19634 815 aa8.52□□□□□ -1.05
RTL3-201ENST00000321110 CDK7P50613 346 aa8.52□□□□□ -1.05
RTL3-201ENST00000321110 RASSF2P50749 326 aa8.52□□□□□ -1.05
RTL3-201ENST00000321110 GALCP54803 685 aa8.52□□□□□ -1.05
RTL3-201ENST00000321110 GRB10Q13322 594 aa8.52□□□□□ -1.05
RTL3-201ENST00000321110 TTLL12Q14166 644 aaPredicted RBP8.52□□□□□ -1.05
RTL3-201ENST00000321110 DDB1Q16531 1140 aa8.52□□□□□ -1.05
RTL3-201ENST00000321110 P3H1Q32P28 736 aa8.52□□□□□ -1.05
RTL3-201ENST00000321110 ADGRA1Q86SQ6 560 aa8.52□□□□□ -1.05
RTL3-201ENST00000321110 HELBQ8NG08 1087 aaPredicted RBP8.52□□□□□ -1.05
RTL3-201ENST00000321110 WDR60Q8WVS4 1066 aa8.52□□□□□ -1.05
RTL3-201ENST00000321110 DDX17Q92841 729 aaKnown RBP8.52□□□□□ -1.05
RTL3-201ENST00000321110 DCAF5Q96JK2 942 aa8.52□□□□□ -1.05
RTL3-201ENST00000321110 PRDM16Q9HAZ2 1276 aa8.52□□□□□ -1.05
RTL3-201ENST00000321110 METTL14Q9HCE5 456 aaKnown RBP8.52□□□□□ -1.05
RTL3-201ENST00000321110 RIC8AQ9NPQ8 531 aa8.52□□□□□ -1.05
RTL3-201ENST00000321110 TMOD4Q9NZQ9 345 aa8.52□□□□□ -1.05
RTL3-201ENST00000321110 AJAP1Q9UKB5 411 aaPredicted RBP8.52□□□□□ -1.05
RTL3-201ENST00000321110 PHTF1Q9UMS5 762 aa8.52□□□□□ -1.05
RTL3-201ENST00000321110 CHMP2BQ9UQN3 213 aa8.52□□□□□ -1.05
RTL3-201ENST00000321110 LAD1O00515 517 aa8.51□□□□□ -1.05
RTL3-201ENST00000321110 TP73O15350 636 aa8.51□□□□□ -1.05
RTL3-201ENST00000321110 MAP3K7O43318 606 aa8.51□□□□□ -1.05
RTL3-201ENST00000321110 DCTN3O75935 186 aa8.51□□□□□ -1.05
RTL3-201ENST00000321110 CCDC166P0CW27 439 aa8.51□□□□□ -1.05
RTL3-201ENST00000321110 ALAS1P13196 640 aa8.51□□□□□ -1.05
RTL3-201ENST00000321110 UCHL3P15374 230 aa8.51□□□□□ -1.05
RTL3-201ENST00000321110 CDR2Q01850 454 aa8.51□□□□□ -1.05
RTL3-201ENST00000321110 EVX2Q03828 476 aa8.51□□□□□ -1.05
RTL3-201ENST00000321110 PPATQ06203 517 aa8.51□□□□□ -1.05
RTL3-201ENST00000321110 STRN3Q13033 797 aa8.51□□□□□ -1.05
RTL3-201ENST00000321110 CTC1Q2NKJ3 1217 aa8.51□□□□□ -1.05
RTL3-201ENST00000321110 TMEM63BQ5T3F8 832 aa8.51□□□□□ -1.05
RTL3-201ENST00000321110 HS2ST1Q7LGA3 356 aa8.51□□□□□ -1.05
RTL3-201ENST00000321110 NELFCDQ8IXH7 590 aa8.51□□□□□ -1.05
RTL3-201ENST00000321110 SRRM1Q8IYB3 904 aaKnown RBP8.51□□□□□ -1.05
RTL3-201ENST00000321110 OLIG1Q8TAK6 271 aa8.51□□□□□ -1.05
RTL3-201ENST00000321110 U2AF1L4Q8WU68 220 aaKnown RBP8.51□□□□□ -1.05
RTL3-201ENST00000321110 C7orf43Q8WVR3 580 aa8.51□□□□□ -1.05
RTL3-201ENST00000321110 C10orf82Q8WW14 230 aa8.51□□□□□ -1.05
RTL3-201ENST00000321110 DYDC2Q96IM9 177 aa8.51□□□□□ -1.05
RTL3-201ENST00000321110 AGBL1Q96MI9 1066 aa8.51□□□□□ -1.05
RTL3-201ENST00000321110 RUNDC3BQ96NL0 473 aa8.51□□□□□ -1.05
RTL3-201ENST00000321110 PNMA5Q96PV4 448 aa8.51□□□□□ -1.05
RTL3-201ENST00000321110 MAF1Q9H063 256 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms