RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 DDX4Q9NQI0 724 aaKnown RBP17.63■□□□□ 0.41
CLIP4-201ENST00000320081 HSPBP1Q9NZL4 362 aa17.63■□□□□ 0.41
CLIP4-201ENST00000320081 MSH4O15457 936 aa17.63■□□□□ 0.41
CLIP4-201ENST00000320081 MT-ND3P03897 115 aa17.63■□□□□ 0.41
CLIP4-201ENST00000320081 KITP10721 976 aa17.63■□□□□ 0.41
CLIP4-201ENST00000320081 SLC12A2P55011 1212 aa17.63■□□□□ 0.41
CLIP4-201ENST00000320081 GPS1Q13098 491 aa17.63■□□□□ 0.41
CLIP4-201ENST00000320081 COG2Q14746 738 aa17.63■□□□□ 0.41
CLIP4-201ENST00000320081 LONRF1Q17RB8 773 aa17.63■□□□□ 0.41
CLIP4-201ENST00000320081 ZNF568Q3ZCX4 644 aa17.63■□□□□ 0.41
CLIP4-201ENST00000320081 CDKAL1Q5VV42 579 aa17.63■□□□□ 0.41
CLIP4-201ENST00000320081 ANKMY2Q8IV38 441 aa17.63■□□□□ 0.41
CLIP4-201ENST00000320081 RTFDC1Q9BY42 306 aaPredicted RBP17.63■□□□□ 0.41
CLIP4-201ENST00000320081 MYOM1P52179 1685 aa17.63■□□□□ 0.41
CLIP4-201ENST00000320081 ITIH6Q6UXX5 1313 aa17.63■□□□□ 0.41
CLIP4-201ENST00000320081 H0YCG3 227 aa17.63■□□□□ 0.41
CLIP4-201ENST00000320081 CRCPO75575 148 aa17.63■□□□□ 0.41
CLIP4-201ENST00000320081 TOM1L1O75674 476 aa17.63■□□□□ 0.41
CLIP4-201ENST00000320081 GNA15P30679 374 aa17.63■□□□□ 0.41
CLIP4-201ENST00000320081 FBXL13Q8NEE6 735 aa17.63■□□□□ 0.41
CLIP4-201ENST00000320081 PITPNM3Q9BZ71 974 aa17.63■□□□□ 0.41
CLIP4-201ENST00000320081 RBAKQ9NYW8 714 aaPredicted RBP17.63■□□□□ 0.41
CLIP4-201ENST00000320081 MROH1Q8NDA8 1641 aa17.63■□□□□ 0.41
CLIP4-201ENST00000320081 YWHAEP62258 255 aaKnown RBP17.62■□□□□ 0.41
CLIP4-201ENST00000320081 KCNA1Q09470 495 aa17.62■□□□□ 0.41
CLIP4-201ENST00000320081 RAB3IL1Q8TBN0 382 aa17.62■□□□□ 0.41
CLIP4-201ENST00000320081 ATP2A3Q93084 1043 aa17.62■□□□□ 0.41
CLIP4-201ENST00000320081 ATP6V1G3Q96LB4 118 aa17.62■□□□□ 0.41
CLIP4-201ENST00000320081 AGPAT1Q99943 283 aa17.62■□□□□ 0.41
CLIP4-201ENST00000320081 FZD1Q9UP38 647 aa17.62■□□□□ 0.41
CLIP4-201ENST00000320081 TCHHQ07283 1943 aa17.62■□□□□ 0.41
CLIP4-201ENST00000320081 CCDC78A2IDD5 438 aa17.62■□□□□ 0.41
CLIP4-201ENST00000320081 PABPN1LA6NDY0 278 aaKnown RBP17.62■□□□□ 0.41
CLIP4-201ENST00000320081 GYS1P13807 737 aa17.62■□□□□ 0.41
CLIP4-201ENST00000320081 ARP10275 920 aa17.62■□□□□ 0.41
CLIP4-201ENST00000320081 GBP1P32455 592 aa17.62■□□□□ 0.41
CLIP4-201ENST00000320081 NUMBP49757 651 aa17.62■□□□□ 0.41
CLIP4-201ENST00000320081 SLC51AQ86UW1 340 aa17.62■□□□□ 0.41
CLIP4-201ENST00000320081 RNF149Q8NC42 400 aa17.62■□□□□ 0.41
CLIP4-201ENST00000320081 NSUN6Q8TEA1 469 aaKnown RBP17.62■□□□□ 0.41
CLIP4-201ENST00000320081 EHD4Q9H223 541 aa17.62■□□□□ 0.41
CLIP4-201ENST00000320081 PFDN4Q9NQP4 134 aa17.62■□□□□ 0.41
CLIP4-201ENST00000320081 FOXN3O00409 490 aaPredicted RBP17.61■□□□□ 0.41
CLIP4-201ENST00000320081 AKAP3O75969 853 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 GUCY2CP25092 1073 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 SLMAPQ14BN4 828 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 MAPK6Q16659 721 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 ZNF667Q5HYK9 610 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 NLRP14Q86W24 1093 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 CYTH2Q99418 400 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 CBWD1Q9BRT8 395 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 TMEM117Q9H0C3 514 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 THAP2Q9H0W7 228 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 ATP6V0A4Q9HBG4 840 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 APEX2Q9UBZ4 518 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 PRPSAP2O60256 369 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 ADRA2BP18089 450 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 WDR72Q3MJ13 1102 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 RSRC2Q7L4I2 434 aaKnown RBP17.61■□□□□ 0.41
CLIP4-201ENST00000320081 PDIK1LQ8N165 341 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 ALG6Q9Y672 507 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 GMNCA6NCL1 334 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 RNF225M0QZC1 329 aaPredicted RBP17.61■□□□□ 0.41
CLIP4-201ENST00000320081 PSMD14O00487 310 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 ORC1Q13415 861 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 ZNF699Q32M78 642 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 NBPF9Q3BBW0 867 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 RAPH1Q70E73 1250 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 FRMD5Q7Z6J6 570 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 LMNTD2Q8IXW0 634 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 ZBED8Q8IZ13 594 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 ATG4AQ8WYN0 398 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 RPF1Q9H9Y2 349 aaKnown RBP17.61■□□□□ 0.41
CLIP4-201ENST00000320081 KCNH7Q9NS40 1196 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 SYNGAP1Q96PV0 1343 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 RPA1P27694 616 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 ARPP19P56211 112 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 PSMC5P62195 406 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 PPP2R2AP63151 447 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 EPHA7Q15375 998 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 CEP128Q6ZU80 1094 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 MAP7D3Q8IWC1 876 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 NAGPAQ9UK23 515 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 L1RE1Q9UN81 338 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 PCDHA10Q9Y5I2 948 aa17.61■□□□□ 0.41
CLIP4-201ENST00000320081 CCDC195A0A1B0GUA6 201 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 CSDE1O75534 798 aaKnown RBP17.6■□□□□ 0.41
CLIP4-201ENST00000320081 COMTP21964 271 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 TMEM62Q0P6H9 643 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 SMTNL2Q2TAL5 461 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 ARHGEF18Q6ZSZ5 1173 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 LRRC71Q8N4P6 559 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 AGR3Q8TD06 166 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 ATXN7L3BQ96GX2 97 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 ERGIC2Q96RQ1 377 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 SLC38A10Q9HBR0 1119 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 PIM2Q9P1W9 311 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 KCNG1Q9UIX4 513 aa17.6■□□□□ 0.41
CLIP4-201ENST00000320081 AGO2Q9UKV8 859 aaKnown RBP17.6■□□□□ 0.41
CLIP4-201ENST00000320081 USP32Q8NFA0 1604 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms