RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 POLR3CQ9BUI4 534 aaPredicted RBP19.74■□□□□ 0.75
TPM1-203ENST00000317516 TBC1D13Q9NVG8 400 aa19.74■□□□□ 0.75
TPM1-203ENST00000317516 STK39Q9UEW8 545 aa19.74■□□□□ 0.75
TPM1-203ENST00000317516 BARX2Q9UMQ3 279 aaPredicted RBP19.74■□□□□ 0.75
TPM1-203ENST00000317516 CNTNAP2Q9UHC6 1331 aa19.74■□□□□ 0.75
TPM1-203ENST00000317516 GPR37L1O60883 481 aa19.73■□□□□ 0.75
TPM1-203ENST00000317516 GLP2RO95838 553 aa19.73■□□□□ 0.75
TPM1-203ENST00000317516 NOTUMQ6P988 496 aa19.73■□□□□ 0.75
TPM1-203ENST00000317516 TMEM184AQ6ZMB5 413 aa19.73■□□□□ 0.75
TPM1-203ENST00000317516 CATSPER3Q86XQ3 398 aa19.73■□□□□ 0.75
TPM1-203ENST00000317516 MRPL43Q8N983 215 aaKnown RBP19.73■□□□□ 0.75
TPM1-203ENST00000317516 MCPH1Q8NEM0 835 aa19.73■□□□□ 0.75
TPM1-203ENST00000317516 KHSRPQ92945 711 aaKnown RBP eCLIP19.73■□□□□ 0.75
TPM1-203ENST00000317516 FAM193BQ96PV7 902 aaPredicted RBP19.73■□□□□ 0.75
TPM1-203ENST00000317516 NFKBIZQ9BYH8 718 aa19.73■□□□□ 0.75
TPM1-203ENST00000317516 NRDE2Q9H7Z3 1164 aa19.73■□□□□ 0.75
TPM1-203ENST00000317516 RSAD1Q9HA92 442 aa19.73■□□□□ 0.75
TPM1-203ENST00000317516 DBR1Q9UK59 544 aaKnown RBP19.73■□□□□ 0.75
TPM1-203ENST00000317516 WDR81Q562E7 1941 aa19.72■□□□□ 0.75
TPM1-203ENST00000317516 NT5C1B-RDH14C9J2C7 533 aa19.72■□□□□ 0.75
TPM1-203ENST00000317516 GALTP07902 379 aa19.72■□□□□ 0.75
TPM1-203ENST00000317516 SPATA31C1P0DKV0 1188 aa19.72■□□□□ 0.75
TPM1-203ENST00000317516 NCLP19338 710 aaKnown RBP19.72■□□□□ 0.75
TPM1-203ENST00000317516 RPA1P27694 616 aa19.72■□□□□ 0.75
TPM1-203ENST00000317516 GIT2Q14161 759 aa19.72■□□□□ 0.75
TPM1-203ENST00000317516 FNDC1Q4ZHG4 1894 aaPredicted RBP19.72■□□□□ 0.75
TPM1-203ENST00000317516 AGMOQ6ZNB7 445 aa19.72■□□□□ 0.75
TPM1-203ENST00000317516 HACE1Q8IYU2 909 aa19.72■□□□□ 0.75
TPM1-203ENST00000317516 STK24Q9Y6E0 443 aa19.72■□□□□ 0.75
TPM1-203ENST00000317516 MEIS3P2A8K0S8 358 aa19.71■□□□□ 0.75
TPM1-203ENST00000317516 HIDE1A8MVS5 230 aa19.71■□□□□ 0.75
TPM1-203ENST00000317516 DCXO43602 365 aa19.71■□□□□ 0.75
TPM1-203ENST00000317516 USO1O60763 962 aaKnown RBP19.71■□□□□ 0.75
TPM1-203ENST00000317516 CXCL14O95715 111 aa19.71■□□□□ 0.75
TPM1-203ENST00000317516 ALDH2P05091 517 aa19.71■□□□□ 0.75
TPM1-203ENST00000317516 ITGA4P13612 1032 aa19.71■□□□□ 0.75
TPM1-203ENST00000317516 HOXB8P17481 243 aaPredicted RBP19.71■□□□□ 0.75
TPM1-203ENST00000317516 MUTP22033 750 aa19.71■□□□□ 0.75
TPM1-203ENST00000317516 CA8P35219 290 aa19.71■□□□□ 0.75
TPM1-203ENST00000317516 CAPSQ13938 189 aa19.71■□□□□ 0.75
TPM1-203ENST00000317516 UBXN11Q5T124 520 aa19.71■□□□□ 0.75
TPM1-203ENST00000317516 HAUS3Q68CZ6 603 aa19.71■□□□□ 0.75
TPM1-203ENST00000317516 DDX53Q86TM3 631 aaKnown RBP19.71■□□□□ 0.75
TPM1-203ENST00000317516 VPS52Q8N1B4 723 aa19.71■□□□□ 0.75
TPM1-203ENST00000317516 ASAP3Q8TDY4 903 aa19.71■□□□□ 0.75
TPM1-203ENST00000317516 IGSF21Q96ID5 467 aa19.71■□□□□ 0.75
TPM1-203ENST00000317516 LRFN3Q9BTN0 628 aa19.71■□□□□ 0.75
TPM1-203ENST00000317516 GBP3Q9H0R5 595 aa19.71■□□□□ 0.75
TPM1-203ENST00000317516 CSRNP2Q9H175 543 aa19.71■□□□□ 0.75
TPM1-203ENST00000317516 POLR3FQ9H1D9 316 aaPredicted RBP19.71■□□□□ 0.75
TPM1-203ENST00000317516 A0A087WWV3 80 aa19.7■□□□□ 0.74
TPM1-203ENST00000317516 TSPAN1O60635 241 aa19.7■□□□□ 0.74
TPM1-203ENST00000317516 MED24O75448 989 aa19.7■□□□□ 0.74
TPM1-203ENST00000317516 GLRA2P23416 452 aa19.7■□□□□ 0.74
TPM1-203ENST00000317516 U2AF2P26368 475 aaKnown RBP eCLIP19.7■□□□□ 0.744e-8■■■■■ 38.8
TPM1-203ENST00000317516 CASP10Q92851 521 aa19.7■□□□□ 0.74
TPM1-203ENST00000317516 TMEM175Q9BSA9 504 aa19.7■□□□□ 0.74
TPM1-203ENST00000317516 RAB34Q9BZG1 259 aa19.7■□□□□ 0.74
TPM1-203ENST00000317516 TRIM6Q9C030 488 aaPredicted RBP19.7■□□□□ 0.74
TPM1-203ENST00000317516 USP15Q9Y4E8 981 aaPredicted RBP19.7■□□□□ 0.74
TPM1-203ENST00000317516 ARHGEF35A5YM69 484 aa19.69■□□□□ 0.74
TPM1-203ENST00000317516 C2orf71A6NGG8 1288 aa19.69■□□□□ 0.74
TPM1-203ENST00000317516 MBTD1Q05BQ5 628 aa19.69■□□□□ 0.74
TPM1-203ENST00000317516 KCNC3Q14003 757 aa19.69■□□□□ 0.74
TPM1-203ENST00000317516 PDIA5Q14554 519 aa19.69■□□□□ 0.74
TPM1-203ENST00000317516 ANKRD54Q6NXT1 300 aa19.69■□□□□ 0.74
TPM1-203ENST00000317516 MAEAQ7L5Y9 396 aa19.69■□□□□ 0.74
TPM1-203ENST00000317516 VN1R2Q8NFZ6 395 aa19.69■□□□□ 0.74
TPM1-203ENST00000317516 PHF7Q9BWX1 381 aaPredicted RBP19.69■□□□□ 0.74
TPM1-203ENST00000317516 FAN1Q9Y2M0 1017 aa19.69■□□□□ 0.74
TPM1-203ENST00000317516 IPPQ9Y573 584 aa19.69■□□□□ 0.74
TPM1-203ENST00000317516 LRRIQ4A6NIV6 560 aa19.68■□□□□ 0.74
TPM1-203ENST00000317516 NR1I2O75469 434 aa19.68■□□□□ 0.74
TPM1-203ENST00000317516 CTSAP10619 480 aa19.68■□□□□ 0.74
TPM1-203ENST00000317516 SLC11A1P49279 550 aa19.68■□□□□ 0.74
TPM1-203ENST00000317516 FXR2P51116 673 aaKnown RBP eCLIP19.68■□□□□ 0.74
TPM1-203ENST00000317516 RBM10P98175 930 aaKnown RBP19.68■□□□□ 0.74
TPM1-203ENST00000317516 TPRNQ4KMQ1 711 aa19.68■□□□□ 0.74
TPM1-203ENST00000317516 LLGL2Q6P1M3 1020 aa19.68■□□□□ 0.74
TPM1-203ENST00000317516 ZNF280BQ86YH2 543 aa19.68■□□□□ 0.74
TPM1-203ENST00000317516 ZBTB8OSQ8IWT0 167 aa19.68■□□□□ 0.74
TPM1-203ENST00000317516 SMG8Q8ND04 991 aaKnown RBP19.68■□□□□ 0.74
TPM1-203ENST00000317516 CPB2Q96IY4 423 aa19.68■□□□□ 0.74
TPM1-203ENST00000317516 DNAJB4Q9UDY4 337 aa19.68■□□□□ 0.74
TPM1-203ENST00000317516 LRWD1Q9UFC0 647 aa19.68■□□□□ 0.74
TPM1-203ENST00000317516 IRAK3Q9Y616 596 aa19.68■□□□□ 0.74
TPM1-203ENST00000317516 LAD1O00515 517 aa19.67■□□□□ 0.74
TPM1-203ENST00000317516 POMCP01189 267 aa19.67■□□□□ 0.74
TPM1-203ENST00000317516 ARF4P18085 180 aaPredicted RBP19.67■□□□□ 0.74
TPM1-203ENST00000317516 CYP11B2P19099 503 aa19.67■□□□□ 0.74
TPM1-203ENST00000317516 CCT6AP40227 531 aaKnown RBP19.67■□□□□ 0.74
TPM1-203ENST00000317516 MCM2P49736 904 aa19.67■□□□□ 0.74
TPM1-203ENST00000317516 POTEGQ6S5H5 508 aa19.67■□□□□ 0.74
TPM1-203ENST00000317516 PADI6Q6TGC4 694 aa19.67■□□□□ 0.74
TPM1-203ENST00000317516 PRIMPOLQ96LW4 560 aa19.67■□□□□ 0.74
TPM1-203ENST00000317516 EIF2AQ9BY44 585 aaKnown RBP19.67■□□□□ 0.74
TPM1-203ENST00000317516 ZBP1Q9H171 429 aa19.67■□□□□ 0.74
TPM1-203ENST00000317516 C2orf40Q9H1Z8 148 aa19.67■□□□□ 0.74
TPM1-203ENST00000317516 PRMT7Q9NVM4 692 aaPredicted RBP19.67■□□□□ 0.74
TPM1-203ENST00000317516 DAXXQ9UER7 740 aaPredicted RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms