RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 L3MBTL3Q96JM7 780 aaPredicted RBP16.15■□□□□ 0.18
CHFR-202ENST00000315585 ACAD9Q9H845 621 aa16.15■□□□□ 0.18
CHFR-202ENST00000315585 AGO4Q9HCK5 861 aaKnown RBP16.15■□□□□ 0.18
CHFR-202ENST00000315585 STXBP5LQ9Y2K9 1186 aa16.15■□□□□ 0.18
CHFR-202ENST00000315585 NOC2LQ9Y3T9 749 aaKnown RBP16.15■□□□□ 0.18
CHFR-202ENST00000315585 SNCAIPQ9Y6H5 919 aa16.15■□□□□ 0.18
CHFR-202ENST00000315585 EIF2AK2P19525 551 aaKnown RBP16.14■□□□□ 0.17
CHFR-202ENST00000315585 CCND2P30279 289 aa16.14■□□□□ 0.17
CHFR-202ENST00000315585 KIF22Q14807 665 aa16.14■□□□□ 0.17
CHFR-202ENST00000315585 DNAJC21Q5F1R6 531 aaKnown RBP16.14■□□□□ 0.17
CHFR-202ENST00000315585 NLRX1Q86UT6 975 aa16.14■□□□□ 0.17
CHFR-202ENST00000315585 ZIM3Q96PE6 472 aa16.14■□□□□ 0.17
CHFR-202ENST00000315585 HINFPQ9BQA5 517 aa16.14■□□□□ 0.17
CHFR-202ENST00000315585 PDCD2LQ9BRP1 358 aa16.14■□□□□ 0.17
CHFR-202ENST00000315585 CARD9Q9H257 536 aa16.14■□□□□ 0.17
CHFR-202ENST00000315585 ZNF214Q9UL59 606 aaPredicted RBP16.14■□□□□ 0.17
CHFR-202ENST00000315585 UTP11Q9Y3A2 253 aaKnown RBP16.14■□□□□ 0.17
CHFR-202ENST00000315585 SAMM50Q9Y512 469 aa16.14■□□□□ 0.17
CHFR-202ENST00000315585 HMGB1P1B2RPK0 211 aaPredicted RBP16.14■□□□□ 0.17
CHFR-202ENST00000315585 SART1O43290 800 aaKnown RBP16.14■□□□□ 0.17
CHFR-202ENST00000315585 ERLIN2O94905 339 aa16.14■□□□□ 0.17
CHFR-202ENST00000315585 YBX3P16989 372 aaKnown RBP eCLIP16.14■□□□□ 0.17
CHFR-202ENST00000315585 SFNP31947 248 aa16.14■□□□□ 0.17
CHFR-202ENST00000315585 HSPA9P38646 679 aaKnown RBP16.14■□□□□ 0.17
CHFR-202ENST00000315585 VAMP7P51809 220 aa16.14■□□□□ 0.17
CHFR-202ENST00000315585 HADHBP55084 474 aaKnown RBP16.14■□□□□ 0.17
CHFR-202ENST00000315585 BAATQ14032 418 aaPredicted RBP16.14■□□□□ 0.17
CHFR-202ENST00000315585 SLC30A10Q6XR72 485 aa16.14■□□□□ 0.17
CHFR-202ENST00000315585 SRLQ86TD4 932 aa16.14■□□□□ 0.17
CHFR-202ENST00000315585 GLYCTKQ8IVS8 523 aa16.14■□□□□ 0.17
CHFR-202ENST00000315585 ARFGAP2Q8N6H7 521 aa16.14■□□□□ 0.17
CHFR-202ENST00000315585 XXYLT1Q8NBI6 393 aa16.14■□□□□ 0.17
CHFR-202ENST00000315585 BANK1Q8NDB2 785 aa16.14■□□□□ 0.17
CHFR-202ENST00000315585 SLC35G2Q8TBE7 412 aa16.14■□□□□ 0.17
CHFR-202ENST00000315585 MORC4Q8TE76 937 aa16.14■□□□□ 0.17
CHFR-202ENST00000315585 CASKIN2Q8WXE0 1202 aa16.14■□□□□ 0.17
CHFR-202ENST00000315585 RAB17Q9H0T7 212 aa16.14■□□□□ 0.17
CHFR-202ENST00000315585 FAM114A2Q9NRY5 505 aa16.14■□□□□ 0.17
CHFR-202ENST00000315585 TULP1O00294 542 aaPredicted RBP16.13■□□□□ 0.17
CHFR-202ENST00000315585 STAM2O75886 525 aa16.13■□□□□ 0.17
CHFR-202ENST00000315585 MYCLP12524 364 aaPredicted RBP16.13■□□□□ 0.17
CHFR-202ENST00000315585 HSPA6P17066 643 aa16.13■□□□□ 0.17
CHFR-202ENST00000315585 JAK3P52333 1124 aa16.13■□□□□ 0.17
CHFR-202ENST00000315585 RNASE9P60153 205 aaKnown RBP16.13■□□□□ 0.17
CHFR-202ENST00000315585 CBWD6Q4V339 395 aa16.13■□□□□ 0.17
CHFR-202ENST00000315585 CBWD3Q5JTY5 395 aa16.13■□□□□ 0.17
CHFR-202ENST00000315585 CBWD5Q5RIA9 395 aa16.13■□□□□ 0.17
CHFR-202ENST00000315585 TSEN2Q8NCE0 465 aaKnown RBP16.13■□□□□ 0.17
CHFR-202ENST00000315585 NSUN6Q8TEA1 469 aaKnown RBP16.13■□□□□ 0.17
CHFR-202ENST00000315585 HVCN1Q96D96 273 aa16.13■□□□□ 0.17
CHFR-202ENST00000315585 POLD4Q9HCU8 107 aa16.13■□□□□ 0.17
CHFR-202ENST00000315585 MIF4GDA9UHW6 222 aaKnown RBP16.13■□□□□ 0.17
CHFR-202ENST00000315585 ZBTB39O15060 712 aa16.13■□□□□ 0.17
CHFR-202ENST00000315585 IRAK1P51617 712 aa16.13■□□□□ 0.17
CHFR-202ENST00000315585 SMTNP53814 917 aa16.13■□□□□ 0.17
CHFR-202ENST00000315585 MRPS9P82933 396 aaKnown RBP16.13■□□□□ 0.17
CHFR-202ENST00000315585 PPATQ06203 517 aa16.13■□□□□ 0.17
CHFR-202ENST00000315585 MAPK7Q13164 816 aa16.13■□□□□ 0.17
CHFR-202ENST00000315585 TMEM132BQ14DG7 1078 aa16.13■□□□□ 0.17
CHFR-202ENST00000315585 TCEAL1Q15170 157 aa16.13■□□□□ 0.17
CHFR-202ENST00000315585 EMC10Q5UCC4 262 aa16.13■□□□□ 0.17
CHFR-202ENST00000315585 GJB7Q6PEY0 223 aa16.13■□□□□ 0.17
CHFR-202ENST00000315585 RUFY4Q6ZNE9 571 aa16.13■□□□□ 0.17
CHFR-202ENST00000315585 C4orf19Q8IY42 314 aa16.13■□□□□ 0.17
CHFR-202ENST00000315585 ANKRD13AQ8IZ07 590 aa16.13■□□□□ 0.17
CHFR-202ENST00000315585 CHST13Q8NET6 341 aa16.13■□□□□ 0.17
CHFR-202ENST00000315585 IL31RAQ8NI17 732 aa16.13■□□□□ 0.17
CHFR-202ENST00000315585 POLR2AP24928 1970 aaKnown RBP16.12■□□□□ 0.17
CHFR-202ENST00000315585 ADM5C9JUS6 153 aa16.12■□□□□ 0.17
CHFR-202ENST00000315585 DKC1O60832 514 aaKnown RBP eCLIP16.12■□□□□ 0.17
CHFR-202ENST00000315585 ABCD1P33897 745 aa16.12■□□□□ 0.17
CHFR-202ENST00000315585 RARRES1P49788 294 aa16.12■□□□□ 0.17
CHFR-202ENST00000315585 MRPS25P82663 173 aaKnown RBP16.12■□□□□ 0.17
CHFR-202ENST00000315585 RDM1Q8NG50 284 aa16.12■□□□□ 0.17
CHFR-202ENST00000315585 LNX1Q8TBB1 728 aaPredicted RBP16.12■□□□□ 0.17
CHFR-202ENST00000315585 GPRASP2Q96D09 838 aa16.12■□□□□ 0.17
CHFR-202ENST00000315585 CDHR1Q96JP9 859 aa16.12■□□□□ 0.17
CHFR-202ENST00000315585 AGPAT1Q99943 283 aa16.12■□□□□ 0.17
CHFR-202ENST00000315585 WRAP73Q9P2S5 460 aaPredicted RBP16.12■□□□□ 0.17
CHFR-202ENST00000315585 USP20Q9Y2K6 914 aa16.12■□□□□ 0.17
CHFR-202ENST00000315585 RRP15Q9Y3B9 282 aaKnown RBP16.12■□□□□ 0.17
CHFR-202ENST00000315585 RIPK3Q9Y572 518 aa16.12■□□□□ 0.17
CHFR-202ENST00000315585 RLFQ13129 1914 aa16.12■□□□□ 0.17
CHFR-202ENST00000315585 SPDYE16A6NNV3 312 aaPredicted RBP16.11■□□□□ 0.17
CHFR-202ENST00000315585 GTF2BQ00403 316 aa16.11■□□□□ 0.17
CHFR-202ENST00000315585 KRT76Q01546 638 aa16.11■□□□□ 0.17
CHFR-202ENST00000315585 SPDYCQ5MJ68 293 aa16.11■□□□□ 0.17
CHFR-202ENST00000315585 ERO1BQ86YB8 467 aa16.11■□□□□ 0.17
CHFR-202ENST00000315585 UBL4BQ8N7F7 174 aa16.11■□□□□ 0.17
CHFR-202ENST00000315585 PROCA1Q8NCQ7 364 aaPredicted RBP16.11■□□□□ 0.17
CHFR-202ENST00000315585 SYT11Q9BT88 431 aa16.11■□□□□ 0.17
CHFR-202ENST00000315585 ANKEF1Q9NU02 776 aa16.11■□□□□ 0.17
CHFR-202ENST00000315585 SEPT11Q9NVA2 429 aaKnown RBP16.11■□□□□ 0.17
CHFR-202ENST00000315585 FBXO40Q9UH90 709 aa16.11■□□□□ 0.17
CHFR-202ENST00000315585 AJAP1Q9UKB5 411 aaPredicted RBP16.11■□□□□ 0.17
CHFR-202ENST00000315585 EIF3HO15372 352 aaKnown RBP eCLIP16.11■□□□□ 0.17
CHFR-202ENST00000315585 GBP1P32455 592 aa16.11■□□□□ 0.17
CHFR-202ENST00000315585 EPHX2P34913 555 aa16.11■□□□□ 0.17
CHFR-202ENST00000315585 PSMC5P62195 406 aa16.11■□□□□ 0.17
CHFR-202ENST00000315585 PLS1Q14651 629 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms