RNA–Protein interactions for RNA: ENST00000312990.10

CDK4-202, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CDK4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-202ENST00000312990 USP20Q9Y2K6 914 aa20.55■□□□□ 0.88
CDK4-202ENST00000312990 TRPV2Q9Y5S1 764 aa20.55■□□□□ 0.88
CDK4-202ENST00000312990 CITO14578 2027 aa20.55■□□□□ 0.88
CDK4-202ENST00000312990 TISP43B9A030 160 aa20.54■□□□□ 0.88
CDK4-202ENST00000312990 PRKCBP05771 671 aa20.54■□□□□ 0.88
CDK4-202ENST00000312990 CKBP12277 381 aa20.54■□□□□ 0.88
CDK4-202ENST00000312990 DARSP14868 501 aaKnown RBP20.54■□□□□ 0.88
CDK4-202ENST00000312990 CRYBB1P53674 252 aaPredicted RBP20.54■□□□□ 0.88
CDK4-202ENST00000312990 RBL2Q08999 1139 aa20.54■□□□□ 0.88
CDK4-202ENST00000312990 MAPK6Q16659 721 aa20.54■□□□□ 0.88
CDK4-202ENST00000312990 AMHR2Q16671 573 aa20.54■□□□□ 0.88
CDK4-202ENST00000312990 ANKRD40Q6AI12 368 aa20.54■□□□□ 0.88
CDK4-202ENST00000312990 TTI2Q6NXR4 508 aa20.54■□□□□ 0.88
CDK4-202ENST00000312990 TRAF7Q6Q0C0 670 aa20.54■□□□□ 0.88
CDK4-202ENST00000312990 DHX40Q8IX18 779 aaKnown RBP20.54■□□□□ 0.88
CDK4-202ENST00000312990 GCOM2Q9BZD3 368 aaPredicted RBP20.54■□□□□ 0.88
CDK4-202ENST00000312990 TMEM206Q9H813 350 aa20.54■□□□□ 0.88
CDK4-202ENST00000312990 ANK1P16157 1881 aa20.54■□□□□ 0.88
CDK4-202ENST00000312990 M0QZ92 97 aa20.54■□□□□ 0.88
CDK4-202ENST00000312990 PDXKO00764 312 aa20.54■□□□□ 0.88
CDK4-202ENST00000312990 CAND2O75155 1236 aa20.54■□□□□ 0.88
CDK4-202ENST00000312990 EIF4BP23588 611 aaKnown RBP20.54■□□□□ 0.88
CDK4-202ENST00000312990 FAAP100Q0VG06 881 aa20.54■□□□□ 0.88
CDK4-202ENST00000312990 STRN3Q13033 797 aa20.54■□□□□ 0.88
CDK4-202ENST00000312990 FAM187BQ17R55 369 aa20.54■□□□□ 0.88
CDK4-202ENST00000312990 ZNF618Q5T7W0 954 aa20.54■□□□□ 0.88
CDK4-202ENST00000312990 SLC39A4Q6P5W5 647 aa20.54■□□□□ 0.88
CDK4-202ENST00000312990 GBP3Q9H0R5 595 aa20.54■□□□□ 0.88
CDK4-202ENST00000312990 TYW1Q9NV66 732 aaKnown RBP20.54■□□□□ 0.88
CDK4-202ENST00000312990 TRAF3IP3Q9Y228 551 aa20.54■□□□□ 0.88
CDK4-202ENST00000312990 ACKR2O00590 384 aa20.53■□□□□ 0.88
CDK4-202ENST00000312990 TLR3O15455 904 aaKnown RBP20.53■□□□□ 0.88
CDK4-202ENST00000312990 PIGRP01833 764 aa20.53■□□□□ 0.88
CDK4-202ENST00000312990 FGFR4P22455 802 aa20.53■□□□□ 0.88
CDK4-202ENST00000312990 NCAPHQ15003 741 aa20.53■□□□□ 0.88
CDK4-202ENST00000312990 FAM26DQ5JW98 314 aa20.53■□□□□ 0.88
CDK4-202ENST00000312990 PPP4R3CPQ6ZMV5 832 aa20.53■□□□□ 0.88
CDK4-202ENST00000312990 LUZP1Q86V48 1076 aa20.53■□□□□ 0.88
CDK4-202ENST00000312990 SYCP3Q8IZU3 236 aa20.53■□□□□ 0.88
CDK4-202ENST00000312990 AOPEPQ8N6M6 819 aa20.53■□□□□ 0.88
CDK4-202ENST00000312990 CAGE1Q8TC20 777 aa20.53■□□□□ 0.88
CDK4-202ENST00000312990 DUSP9Q99956 384 aaKnown RBP20.53■□□□□ 0.88
CDK4-202ENST00000312990 OSBPL7Q9BZF2 842 aa20.53■□□□□ 0.88
CDK4-202ENST00000312990 PRMT7Q9NVM4 692 aaPredicted RBP20.53■□□□□ 0.88
CDK4-202ENST00000312990 ATP11BQ9Y2G3 1177 aa20.53■□□□□ 0.88
CDK4-202ENST00000312990 BICDL2A1A5D9 508 aa20.52■□□□□ 0.88
CDK4-202ENST00000312990 DCDC2CA8MYV0 355 aa20.52■□□□□ 0.88
CDK4-202ENST00000312990 HNRNPDLO14979 420 aaKnown RBP20.52■□□□□ 0.88
CDK4-202ENST00000312990 B4GALT5O43286 388 aa20.52■□□□□ 0.88
CDK4-202ENST00000312990 LRRC63Q05C16 580 aa20.52■□□□□ 0.88
CDK4-202ENST00000312990 FOXR2Q6PJQ5 311 aa20.52■□□□□ 0.88
CDK4-202ENST00000312990 RNF214Q8ND24 703 aa20.52■□□□□ 0.88
CDK4-202ENST00000312990 ENOX1Q8TC92 643 aaKnown RBP20.52■□□□□ 0.88
CDK4-202ENST00000312990 ABHD8Q96I13 439 aa20.52■□□□□ 0.88
CDK4-202ENST00000312990 TARS2Q9BW92 718 aaKnown RBP20.52■□□□□ 0.88
CDK4-202ENST00000312990 RBSNQ9H1K0 784 aa20.52■□□□□ 0.88
CDK4-202ENST00000312990 AGPAT3Q9NRZ7 376 aa20.52■□□□□ 0.88
CDK4-202ENST00000312990 EXOC7Q9UPT5 735 aa20.52■□□□□ 0.88
CDK4-202ENST00000312990 CNTNAP2Q9UHC6 1331 aa20.52■□□□□ 0.87
CDK4-202ENST00000312990 ANKRD63C9JTQ0 380 aa20.51■□□□□ 0.87
CDK4-202ENST00000312990 MYL5Q02045 173 aa20.51■□□□□ 0.87
CDK4-202ENST00000312990 PRIMPOLQ96LW4 560 aa20.51■□□□□ 0.87
CDK4-202ENST00000312990 MRPL4Q9BYD3 311 aaKnown RBP20.51■□□□□ 0.87
CDK4-202ENST00000312990 IKBKBO14920 756 aa20.51■□□□□ 0.87
CDK4-202ENST00000312990 TSPAN1O60635 241 aa20.51■□□□□ 0.87
CDK4-202ENST00000312990 ADSSP30520 456 aa20.51■□□□□ 0.87
CDK4-202ENST00000312990 PRPF4BQ13523 1007 aaKnown RBP20.51■□□□□ 0.87
CDK4-202ENST00000312990 FBXO47Q5MNV8 452 aa20.51■□□□□ 0.87
CDK4-202ENST00000312990 FAM228AQ86W67 206 aa20.51■□□□□ 0.87
CDK4-202ENST00000312990 BICD1Q96G01 975 aa20.51■□□□□ 0.87
CDK4-202ENST00000312990 ACO2Q99798 780 aaKnown RBP20.51■□□□□ 0.87
CDK4-202ENST00000312990 NOC4LQ9BVI4 516 aaKnown RBP20.51■□□□□ 0.87
CDK4-202ENST00000312990 HSD3B7Q9H2F3 369 aa20.51■□□□□ 0.87
CDK4-202ENST00000312990 TBX21Q9UL17 535 aa20.51■□□□□ 0.87
CDK4-202ENST00000312990 NOC2LQ9Y3T9 749 aaKnown RBP20.51■□□□□ 0.87
CDK4-202ENST00000312990 UMODL1Q5DID0 1318 aa20.5■□□□□ 0.87
CDK4-202ENST00000312990 PITPNM1O00562 1244 aa20.5■□□□□ 0.87
CDK4-202ENST00000312990 CLIC2O15247 247 aa20.5■□□□□ 0.87
CDK4-202ENST00000312990 ARF4P18085 180 aaPredicted RBP20.5■□□□□ 0.87
CDK4-202ENST00000312990 LIG4P49917 911 aa20.5■□□□□ 0.87
CDK4-202ENST00000312990 BFSP2Q13515 415 aa20.5■□□□□ 0.87
CDK4-202ENST00000312990 MBTPS1Q14703 1052 aa20.5■□□□□ 0.87
CDK4-202ENST00000312990 EDRF1Q3B7T1 1238 aa20.5■□□□□ 0.87
CDK4-202ENST00000312990 ZPBP2Q6X784 338 aa20.5■□□□□ 0.87
CDK4-202ENST00000312990 LRRC55Q6ZSA7 311 aa20.5■□□□□ 0.87
CDK4-202ENST00000312990 HS2ST1Q7LGA3 356 aa20.5■□□□□ 0.87
CDK4-202ENST00000312990 ZC3H3Q8IXZ2 948 aaKnown RBP20.5■□□□□ 0.87
CDK4-202ENST00000312990 CCDC155Q8N6L0 562 aa20.5■□□□□ 0.87
CDK4-202ENST00000312990 EEF2KMTQ96G04 330 aa20.5■□□□□ 0.87
CDK4-202ENST00000312990 TSG101Q99816 390 aa20.5■□□□□ 0.87
CDK4-202ENST00000312990 CBWD1Q9BRT8 395 aa20.5■□□□□ 0.87
CDK4-202ENST00000312990 NFE2L3Q9Y4A8 694 aa20.5■□□□□ 0.87
CDK4-202ENST00000312990 ABLIM1O14639 778 aa20.49■□□□□ 0.87
CDK4-202ENST00000312990 CALUO43852 315 aaPredicted RBP20.49■□□□□ 0.87
CDK4-202ENST00000312990 ERLIN2O94905 339 aa20.49■□□□□ 0.87
CDK4-202ENST00000312990 SFPQP23246 707 aaKnown RBP eCLIP20.49■□□□□ 0.87
CDK4-202ENST00000312990 PCBP1Q15365 356 aaKnown RBP eCLIP20.49■□□□□ 0.872e-10■■■■■ 71.2
CDK4-202ENST00000312990 NFIL3Q16649 462 aa20.49■□□□□ 0.87
CDK4-202ENST00000312990 SPATA1Q5VX52 437 aa20.49■□□□□ 0.87
CDK4-202ENST00000312990 TSHZ1Q6ZSZ6 1077 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms