RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 MREGQ8N565 214 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 XAB2Q9HCS7 855 aaKnown RBP9.37□□□□□ -0.91
COL6A5-202ENST00000312481 CDK5RAP2Q96SN8 1893 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 NUP188Q5SRE5 1749 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 GNPATO15228 680 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 LSM8O95777 96 aaKnown RBP9.37□□□□□ -0.91
COL6A5-202ENST00000312481 RC3H1Q5TC82 1133 aaKnown RBP9.37□□□□□ -0.91
COL6A5-202ENST00000312481 HIBCHQ6NVY1 386 aaPredicted RBP9.37□□□□□ -0.91
COL6A5-202ENST00000312481 CCNI2Q6ZMN8 369 aaPredicted RBP9.37□□□□□ -0.91
COL6A5-202ENST00000312481 TBCKQ8TEA7 893 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 ISCA1Q9BUE6 129 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 BRD8Q9H0E9 1235 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 PIK3C2AO00443 1686 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 COPEO14579 308 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 KCNQ4P56696 695 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 HIF1AQ16665 826 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 NIM1KQ8IY84 436 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 CCT8L2Q96SF2 557 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 A1CFQ9NQ94 594 aaKnown RBP9.37□□□□□ -0.91
COL6A5-202ENST00000312481 ZFP69BQ9UJL9 534 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 KIAA1257Q9ULG3 409 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 MED1Q15648 1581 aaPredicted RBP9.37□□□□□ -0.91
COL6A5-202ENST00000312481 SLC30A9Q6PML9 568 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 ENGASEQ8NFI3 743 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 CEP95Q96GE4 821 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 FAM210AQ96ND0 272 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 NUDCD1Q96RS6 583 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 ZNF577Q9BSK1 485 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 SLAIN2Q9P270 581 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 BUB1O43683 1085 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 IFNB1P01574 187 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 SLFN13Q68D06 897 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 CROCCP3Q8IVE0 287 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 CD302Q8IX05 232 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 SPDL1Q96EA4 605 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 STAP1Q9ULZ2 295 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 HPCAL4Q9UM19 191 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.37□□□□□ -0.91
COL6A5-202ENST00000312481 ZDHHC9Q9Y397 364 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 ANXA1P04083 346 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 TRPM8Q7Z2W7 1104 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 ZNF589Q86UQ0 364 aaPredicted RBP9.37□□□□□ -0.91
COL6A5-202ENST00000312481 PBXIP1Q96AQ6 731 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 PGBD1Q96JS3 809 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 GPCPD1Q9NPB8 672 aa9.37□□□□□ -0.91
COL6A5-202ENST00000312481 RSBN1LQ6PCB5 846 aaPredicted RBP9.36□□□□□ -0.91
COL6A5-202ENST00000312481 ADSSL1Q8N142 457 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 PCYOX1LQ8NBM8 494 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 CALML6Q8TD86 181 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 TSPAN18Q96SJ8 248 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 ZBTB18Q99592 522 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 TMEM247A6NEH6 219 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 NPR1P16066 1061 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 USP13Q92995 863 aaPredicted RBP9.36□□□□□ -0.91
COL6A5-202ENST00000312481 PPP1R14BQ96C90 147 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 TMX1Q9H3N1 280 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 SLC24A2Q9UI40 661 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 IL18RAPO95256 599 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 TTC19Q6DKK2 380 aaPredicted RBP9.36□□□□□ -0.91
COL6A5-202ENST00000312481 OR9Q1Q8NGQ5 310 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 PABPC3Q9H361 631 aaKnown RBP9.36□□□□□ -0.91
COL6A5-202ENST00000312481 CCDC134Q9H6E4 229 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 GPBP1L1Q9HC44 474 aaPredicted RBP9.36□□□□□ -0.91
COL6A5-202ENST00000312481 CD2BP2O95400 341 aaKnown RBP9.36□□□□□ -0.91
COL6A5-202ENST00000312481 CPA1P15085 419 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 PPM1FP49593 454 aaPredicted RBP9.36□□□□□ -0.91
COL6A5-202ENST00000312481 PLTPP55058 493 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 XIAPP98170 497 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.36□□□□□ -0.91
COL6A5-202ENST00000312481 EPAS1Q99814 870 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 GPHNQ9NQX3 736 aaPredicted RBP9.36□□□□□ -0.91
COL6A5-202ENST00000312481 TUBGCP4Q9UGJ1 667 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 SMIM23A6NLE4 172 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 EYA4O95677 639 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 GNAT1P11488 350 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 KCNH2Q12809 1159 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 SUPT20HL1Q3ZLR7 823 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 SKAP1Q86WV1 359 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 TBC1D23Q9NUY8 699 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 CCT8L1PA6NM43 557 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 ACAP1Q15027 740 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 DLGAP5Q15398 846 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 E4F1Q66K89 784 aaPredicted RBP9.36□□□□□ -0.91
COL6A5-202ENST00000312481 NBPF3Q9H094 633 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 STARD13Q9Y3M8 1113 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 NCAM2O15394 837 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 FKBP6O75344 327 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 ARL1P40616 181 aaPredicted RBP9.36□□□□□ -0.91
COL6A5-202ENST00000312481 CYLC2Q14093 348 aaPredicted RBP9.36□□□□□ -0.91
COL6A5-202ENST00000312481 NUGGCQ68CJ6 796 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 TGS1Q96RS0 853 aaKnown RBP9.36□□□□□ -0.91
COL6A5-202ENST00000312481 POLR3CQ9BUI4 534 aaPredicted RBP9.36□□□□□ -0.91
COL6A5-202ENST00000312481 LGR6Q9HBX8 967 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 SLC39A2Q9NP94 309 aa9.36□□□□□ -0.91
COL6A5-202ENST00000312481 AREL1O15033 823 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 KLHL41O60662 606 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 INPP5AQ14642 412 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 RNF207Q6ZRF8 634 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 NEDD1Q8NHV4 660 aa9.35□□□□□ -0.91
COL6A5-202ENST00000312481 MAGED4Q96JG8 741 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms