RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 LRFN2Q9ULH4 789 aa13.32□□□□□ -0.28
SCFD1-201ENST00000311943 INPP5FQ9Y2H2 1132 aa13.32□□□□□ -0.28
SCFD1-201ENST00000311943 MYMKA6NI61 221 aa13.32□□□□□ -0.28
SCFD1-201ENST00000311943 F8W810 466 aa13.32□□□□□ -0.28
SCFD1-201ENST00000311943 RPLP2P05387 115 aaKnown RBP13.32□□□□□ -0.28
SCFD1-201ENST00000311943 GIT2Q14161 759 aa13.32□□□□□ -0.28
SCFD1-201ENST00000311943 SEZ6Q53EL9 994 aa13.32□□□□□ -0.28
SCFD1-201ENST00000311943 NT5DC1Q5TFE4 455 aa13.32□□□□□ -0.28
SCFD1-201ENST00000311943 SRGAP1Q7Z6B7 1085 aa13.32□□□□□ -0.28
SCFD1-201ENST00000311943 GRAMD1CQ8IYS0 662 aa13.32□□□□□ -0.28
SCFD1-201ENST00000311943 CALML4Q96GE6 196 aa13.32□□□□□ -0.28
SCFD1-201ENST00000311943 ZBTB45Q96K62 511 aaPredicted RBP13.32□□□□□ -0.28
SCFD1-201ENST00000311943 ZFP42Q96MM3 310 aa13.32□□□□□ -0.28
SCFD1-201ENST00000311943 ZNF396Q96N95 335 aaPredicted RBP13.32□□□□□ -0.28
SCFD1-201ENST00000311943 KLK14Q9P0G3 267 aa13.32□□□□□ -0.28
SCFD1-201ENST00000311943 PCDHB2Q9Y5E7 798 aa13.32□□□□□ -0.28
SCFD1-201ENST00000311943 MUC3AQ02505 3323 aa13.31□□□□□ -0.28
SCFD1-201ENST00000311943 TISP43B9A030 160 aa13.31□□□□□ -0.28
SCFD1-201ENST00000311943 GRM6O15303 877 aa13.31□□□□□ -0.28
SCFD1-201ENST00000311943 ASAP2O43150 1006 aa13.31□□□□□ -0.28
SCFD1-201ENST00000311943 BMP15O95972 392 aa13.31□□□□□ -0.28
SCFD1-201ENST00000311943 FOSL2P15408 326 aa13.31□□□□□ -0.28
SCFD1-201ENST00000311943 MUTP22033 750 aa13.31□□□□□ -0.28
SCFD1-201ENST00000311943 IGFBP6P24592 240 aaPredicted RBP13.31□□□□□ -0.28
SCFD1-201ENST00000311943 ME1P48163 572 aa13.31□□□□□ -0.28
SCFD1-201ENST00000311943 TMEM173Q86WV6 379 aaPredicted RBP13.31□□□□□ -0.28
SCFD1-201ENST00000311943 TMEM192Q8IY95 271 aa13.31□□□□□ -0.28
SCFD1-201ENST00000311943 GLIS3Q8NEA6 775 aa13.31□□□□□ -0.28
SCFD1-201ENST00000311943 LEO1Q8WVC0 666 aaPredicted RBP13.31□□□□□ -0.28
SCFD1-201ENST00000311943 LARP4BQ92615 738 aaKnown RBP13.31□□□□□ -0.28
SCFD1-201ENST00000311943 FZD8Q9H461 694 aa13.31□□□□□ -0.28
SCFD1-201ENST00000311943 TMEM161AQ9NX61 479 aa13.31□□□□□ -0.28
SCFD1-201ENST00000311943 TBC1D7Q9P0N9 293 aa13.31□□□□□ -0.28
SCFD1-201ENST00000311943 NLRC5Q86WI3 1866 aa13.31□□□□□ -0.28
SCFD1-201ENST00000311943 GAS2O43903 313 aaKnown RBP13.3□□□□□ -0.28
SCFD1-201ENST00000311943 ERLIN2O94905 339 aa13.3□□□□□ -0.28
SCFD1-201ENST00000311943 NPTXRO95502 500 aa13.3□□□□□ -0.28
SCFD1-201ENST00000311943 NMT1P30419 496 aaKnown RBP13.3□□□□□ -0.28
SCFD1-201ENST00000311943 ERVK-21P61565 698 aa13.3□□□□□ -0.28
SCFD1-201ENST00000311943 CAMK1Q14012 370 aa13.3□□□□□ -0.28
SCFD1-201ENST00000311943 BECN1Q14457 450 aa13.3□□□□□ -0.28
SCFD1-201ENST00000311943 ZC2HC1CQ53FD0 456 aaPredicted RBP13.3□□□□□ -0.28
SCFD1-201ENST00000311943 CDCA2Q69YH5 1023 aaPredicted RBP13.3□□□□□ -0.28
SCFD1-201ENST00000311943 ZNF280BQ86YH2 543 aa13.3□□□□□ -0.28
SCFD1-201ENST00000311943 IFNLR1Q8IU57 520 aaPredicted RBP13.3□□□□□ -0.28
SCFD1-201ENST00000311943 FIBCD1Q8N539 461 aa13.3□□□□□ -0.28
SCFD1-201ENST00000311943 DEPTORQ8TB45 409 aa13.3□□□□□ -0.28
SCFD1-201ENST00000311943 DHX58Q96C10 678 aa13.3□□□□□ -0.28
SCFD1-201ENST00000311943 TGS1Q96RS0 853 aaKnown RBP13.3□□□□□ -0.28
SCFD1-201ENST00000311943 NT5C3AQ9H0P0 336 aa13.3□□□□□ -0.28
SCFD1-201ENST00000311943 CWH43Q9H720 699 aa13.3□□□□□ -0.28
SCFD1-201ENST00000311943 DNAJB4Q9UDY4 337 aa13.3□□□□□ -0.28
SCFD1-201ENST00000311943 PLAGL2Q9UPG8 496 aa13.3□□□□□ -0.28
SCFD1-201ENST00000311943 PPME1Q9Y570 386 aa13.3□□□□□ -0.28
SCFD1-201ENST00000311943 IPPQ9Y573 584 aa13.3□□□□□ -0.28
SCFD1-201ENST00000311943 PPP6R2O75170 966 aa13.3□□□□□ -0.28
SCFD1-201ENST00000311943 YEATS4O95619 227 aa13.3□□□□□ -0.28
SCFD1-201ENST00000311943 POMCP01189 267 aa13.3□□□□□ -0.28
SCFD1-201ENST00000311943 GUCY2CP25092 1073 aa13.3□□□□□ -0.28
SCFD1-201ENST00000311943 CTNNB1P35222 781 aa13.3□□□□□ -0.28
SCFD1-201ENST00000311943 NAMPTP43490 491 aa13.3□□□□□ -0.28
SCFD1-201ENST00000311943 KCNA1Q09470 495 aa13.3□□□□□ -0.28
SCFD1-201ENST00000311943 TFDP1Q14186 410 aa13.3□□□□□ -0.28
SCFD1-201ENST00000311943 E2F4Q16254 413 aa13.3□□□□□ -0.28
SCFD1-201ENST00000311943 RRAGBQ5VZM2 374 aa13.3□□□□□ -0.28
SCFD1-201ENST00000311943 FIZ1Q96SL8 496 aa13.3□□□□□ -0.28
SCFD1-201ENST00000311943 TARS2Q9BW92 718 aaKnown RBP13.3□□□□□ -0.28
SCFD1-201ENST00000311943 HAPLN2Q9GZV7 340 aa13.3□□□□□ -0.28
SCFD1-201ENST00000311943 GBP3Q9H0R5 595 aa13.3□□□□□ -0.28
SCFD1-201ENST00000311943 PDZD7Q9H5P4 517 aa13.3□□□□□ -0.28
SCFD1-201ENST00000311943 RCOR1Q9UKL0 485 aa13.3□□□□□ -0.28
SCFD1-201ENST00000311943 A0A1B0GVL5 298 aa13.29□□□□□ -0.28
SCFD1-201ENST00000311943 MEFVO15553 781 aaPredicted RBP13.29□□□□□ -0.28
SCFD1-201ENST00000311943 DDHD2O94830 711 aa13.29□□□□□ -0.28
SCFD1-201ENST00000311943 PRKCBP05771 671 aa13.29□□□□□ -0.28
SCFD1-201ENST00000311943 IRS1P35568 1242 aa13.29□□□□□ -0.28
SCFD1-201ENST00000311943 OSTNP61366 133 aa13.29□□□□□ -0.28
SCFD1-201ENST00000311943 BCL7CQ8WUZ0 217 aaPredicted RBP13.29□□□□□ -0.28
SCFD1-201ENST00000311943 C1orf112Q9NSG2 853 aa13.29□□□□□ -0.28
SCFD1-201ENST00000311943 MTCH2Q9Y6C9 303 aa13.29□□□□□ -0.28
SCFD1-201ENST00000311943 ATG2AQ2TAZ0 1938 aa13.29□□□□□ -0.28
SCFD1-201ENST00000311943 A0A1B0GUA9 196 aa13.29□□□□□ -0.28
SCFD1-201ENST00000311943 OFD1O75665 1012 aa13.29□□□□□ -0.28
SCFD1-201ENST00000311943 GTF2F1P35269 517 aaKnown RBP eCLIP13.29□□□□□ -0.28
SCFD1-201ENST00000311943 MLH1P40692 756 aa13.29□□□□□ -0.28
SCFD1-201ENST00000311943 CASP5P51878 434 aa13.29□□□□□ -0.28
SCFD1-201ENST00000311943 ZBTB33Q86T24 672 aa13.29□□□□□ -0.28
SCFD1-201ENST00000311943 EXOC8Q8IYI6 725 aa13.29□□□□□ -0.28
SCFD1-201ENST00000311943 KLHL23Q8NBE8 558 aa13.29□□□□□ -0.28
SCFD1-201ENST00000311943 DDX12PQ92771 950 aa13.29□□□□□ -0.28
SCFD1-201ENST00000311943 DNAJC19Q96DA6 116 aa13.29□□□□□ -0.28
SCFD1-201ENST00000311943 GAD1Q99259 594 aa13.29□□□□□ -0.28
SCFD1-201ENST00000311943 BLZF1Q9H2G9 400 aa13.29□□□□□ -0.28
SCFD1-201ENST00000311943 GOLPH3LQ9H4A5 285 aa13.29□□□□□ -0.28
SCFD1-201ENST00000311943 KMT5AQ9NQR1 393 aa13.29□□□□□ -0.28
SCFD1-201ENST00000311943 PLXNA4Q9HCM2 1894 aa13.28□□□□□ -0.28
SCFD1-201ENST00000311943 MYH11P35749 1972 aa13.28□□□□□ -0.28
SCFD1-201ENST00000311943 POLR2DO15514 142 aaKnown RBP13.28□□□□□ -0.28
SCFD1-201ENST00000311943 STAG3L1P0CL83 205 aa13.28□□□□□ -0.28
SCFD1-201ENST00000311943 HARSP12081 509 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms