RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 ZNF18P17022 549 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 CYP2J2P51589 502 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 PRMT2P55345 433 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 HUNKP57058 714 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 ACTR2P61160 394 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 SP4Q02446 784 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 NPY5RQ15761 445 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 DGKDQ16760 1214 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 MPP4Q96JB8 637 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 PNMA5Q96PV4 448 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 GCOM2Q9BZD3 368 aaPredicted RBP6.47□□□□□ -1.37
SEC22A-201ENST00000309934 POLR3FQ9H1D9 316 aaPredicted RBP6.47□□□□□ -1.37
SEC22A-201ENST00000309934 NUB1Q9Y5A7 615 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 ANKRD31Q8N7Z5 1873 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 EIF3CLB5ME19 914 aaKnown RBP6.47□□□□□ -1.37
SEC22A-201ENST00000309934 THAP12O43422 761 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 GGPS1O95749 300 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 H2AFZP0C0S5 128 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 TNNI1P19237 187 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 ERVK-9P63128 1117 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 ERVK-24P63145 666 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 UBXN2AP68543 259 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 GIT2Q14161 759 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 STILQ15468 1287 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 FAM110CQ1W6H9 321 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 KRT39Q6A163 491 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 TYW1BQ6NUM6 668 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 H2AFVQ71UI9 128 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 CCDC80Q76M96 950 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 ZNF677Q86XU0 584 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 LRRC45Q96CN5 670 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 CHAMP1Q96JM3 812 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 TEPSINQ96N21 525 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 EIF3CQ99613 913 aaKnown RBP6.47□□□□□ -1.37
SEC22A-201ENST00000309934 ABHD16BQ9H3Z7 469 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 TMEM134Q9H6X4 195 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 GNRH1P01148 92 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 MAN1A1P33908 653 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 MARSP56192 900 aaKnown RBP6.47□□□□□ -1.37
SEC22A-201ENST00000309934 PEX3P56589 373 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 PRKCEQ02156 737 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 EMC2Q15006 297 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 DCAF4L1Q3SXM0 396 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 TTI2Q6NXR4 508 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 CCDC121Q6ZUS5 278 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 RHOT2Q8IXI1 618 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 CYP26B1Q9NR63 512 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 FBXO28Q9NVF7 368 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 FBXO9Q9UK97 447 aaPredicted RBP6.47□□□□□ -1.37
SEC22A-201ENST00000309934 FBXL5Q9UKA1 691 aa6.47□□□□□ -1.37
SEC22A-201ENST00000309934 BAZ2AQ9UIF9 1905 aaKnown RBP6.47□□□□□ -1.37
SEC22A-201ENST00000309934 ATP8B3O60423 1300 aa6.46□□□□□ -1.37
SEC22A-201ENST00000309934 AXLP30530 894 aa6.46□□□□□ -1.37
SEC22A-201ENST00000309934 CASP14P31944 242 aa6.46□□□□□ -1.37
SEC22A-201ENST00000309934 VAMP7P51809 220 aa6.46□□□□□ -1.37
SEC22A-201ENST00000309934 SLC12A3P55017 1021 aa6.46□□□□□ -1.37
SEC22A-201ENST00000309934 RBL2Q08999 1139 aa6.46□□□□□ -1.37
SEC22A-201ENST00000309934 MYO1EQ12965 1108 aa6.46□□□□□ -1.37
SEC22A-201ENST00000309934 NLGN2Q8NFZ4 835 aa6.46□□□□□ -1.37
SEC22A-201ENST00000309934 HAS1Q92839 578 aa6.46□□□□□ -1.37
SEC22A-201ENST00000309934 THOC1Q96FV9 657 aaKnown RBP6.46□□□□□ -1.37
SEC22A-201ENST00000309934 RPF1Q9H9Y2 349 aaKnown RBP6.46□□□□□ -1.37
SEC22A-201ENST00000309934 TRMT1Q9NXH9 659 aaKnown RBP6.46□□□□□ -1.37
SEC22A-201ENST00000309934 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.46□□□□□ -1.37
SEC22A-201ENST00000309934 MYH8P13535 1937 aa6.46□□□□□ -1.37
SEC22A-201ENST00000309934 DENND3A2RUS2 1198 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 ENO4A6NNW6 628 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 PP2D1A8MPX8 630 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 PDHXO00330 501 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 TNPO2O14787 897 aaKnown RBP6.46□□□□□ -1.38
SEC22A-201ENST00000309934 MED24O75448 989 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 SNUPNO95149 360 aaKnown RBP6.46□□□□□ -1.38
SEC22A-201ENST00000309934 CDC25AP30304 524 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 VAV2P52735 878 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 SEL1L2Q5TEA6 688 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 ANKRD40Q6AI12 368 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 ZPBP2Q6X784 338 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 ZNF410Q86VK4 478 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 CCDC26Q8TAB7 109 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 ATP8B4Q8TF62 1192 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 GJA10Q969M2 543 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 FAXDC2Q96IV6 333 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 HSD17B14Q9BPX1 270 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 MSTO1Q9BUK6 570 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 A1CFQ9NQ94 594 aaKnown RBP6.46□□□□□ -1.38
SEC22A-201ENST00000309934 ABHD10Q9NUJ1 306 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 GCNT4Q9P109 453 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 PGAP2Q9UHJ9 254 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 PAIP2BQ9ULR5 123 aaKnown RBP6.46□□□□□ -1.38
SEC22A-201ENST00000309934 SNCAIPQ9Y6H5 919 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 FAM86B1E9PN63 330 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 NFIBO00712 420 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 TLR3O15455 904 aaKnown RBP6.46□□□□□ -1.38
SEC22A-201ENST00000309934 EXTL3O43909 919 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 CABYRO75952 493 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 FAM86B2P0C5J1 330 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 ELF1P32519 619 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 C1QTNF8P60827 252 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 TAP1Q03518 808 aa6.46□□□□□ -1.38
SEC22A-201ENST00000309934 SMC1AQ14683 1233 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms