RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 PCDHB18PQ96TA0 734 aa16.45■□□□□ 0.22
SPIRE1-201ENST00000309836 DPH5Q9H2P9 285 aa16.45■□□□□ 0.22
SPIRE1-201ENST00000309836 ST6GALNAC4Q9H4F1 302 aa16.45■□□□□ 0.22
SPIRE1-201ENST00000309836 GPRC5CQ9NQ84 441 aa16.45■□□□□ 0.22
SPIRE1-201ENST00000309836 TMEM51Q9NW97 253 aa16.45■□□□□ 0.22
SPIRE1-201ENST00000309836 PHF20L1A8MW92 1017 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 MYO1FO00160 1098 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 SLC16A4O15374 487 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 FTLP02792 175 aaPredicted RBP16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 ALAS1P13196 640 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 MAGEA9P43362 315 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 SLC20A2Q08357 652 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 PRPF4BQ13523 1007 aaKnown RBP16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 C11orf63Q6NUN7 778 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 ZNF746Q6NUN9 644 aaPredicted RBP16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 HAUS6Q7Z4H7 955 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 TMC3Q7Z5M5 1100 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 ADAT2Q7Z6V5 191 aaKnown RBP16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 RTKN2Q8IZC4 609 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 TTLL6Q8N841 843 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 TAAR1Q96RJ0 339 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 RAVER2Q9HCJ3 691 aaKnown RBP16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 FAM114A2Q9NRY5 505 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 USP20Q9Y2K6 914 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 SAMM50Q9Y512 469 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 FER1L6Q2WGJ9 1857 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 WDR46O15213 610 aaKnown RBP16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 MAPK13O15264 365 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 SGPL1O95470 568 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 VCAM1P19320 739 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 EIF2AK2P19525 551 aaKnown RBP16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 YWHABP31946 246 aaKnown RBP16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 LSP1P33241 339 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 MARCKSL1P49006 195 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 NCKAP1LP55160 1127 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 MTMR1Q13613 665 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 TBC1D10BQ4KMP7 808 aaPredicted RBP16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 AADACL2Q6P093 401 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 MCF2L2Q86YR7 1114 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 RHOT2Q8IXI1 618 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 CPXCR1Q8N123 301 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 PRPF38AQ8NAV1 312 aaKnown RBP16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 VTI1AQ96AJ9 217 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 KREMEN1Q96MU8 473 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 TMEM117Q9H0C3 514 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 HOMER2Q9NSB8 354 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 TMOD4Q9NZQ9 345 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 NOCTQ9UK39 431 aaKnown RBP16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 SCAF8Q9UPN6 1271 aaKnown RBP16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 ALG6Q9Y672 507 aa16.44■□□□□ 0.22
SPIRE1-201ENST00000309836 GOLGA8IPA6NC78 632 aa16.43■□□□□ 0.22
SPIRE1-201ENST00000309836 GOLGA8JA6NMD2 632 aa16.43■□□□□ 0.22
SPIRE1-201ENST00000309836 CCNE2O96020 404 aa16.43■□□□□ 0.22
SPIRE1-201ENST00000309836 CTNNA1P35221 906 aaKnown RBP16.43■□□□□ 0.22
SPIRE1-201ENST00000309836 MCCD1P59942 119 aaPredicted RBP16.43■□□□□ 0.22
SPIRE1-201ENST00000309836 PTGISQ16647 500 aa16.43■□□□□ 0.22
SPIRE1-201ENST00000309836 NBPF9Q3BBW0 867 aa16.43■□□□□ 0.22
SPIRE1-201ENST00000309836 PLA2G4FQ68DD2 849 aa16.43■□□□□ 0.22
SPIRE1-201ENST00000309836 NOP9Q86U38 636 aaKnown RBP16.43■□□□□ 0.22
SPIRE1-201ENST00000309836 KRT35Q92764 455 aa16.43■□□□□ 0.22
SPIRE1-201ENST00000309836 TXLNGYQ9BZA5 131 aa16.43■□□□□ 0.22
SPIRE1-201ENST00000309836 SLC38A10Q9HBR0 1119 aa16.43■□□□□ 0.22
SPIRE1-201ENST00000309836 LRRC4CQ9HCJ2 640 aa16.43■□□□□ 0.22
SPIRE1-201ENST00000309836 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.43■□□□□ 0.22
SPIRE1-201ENST00000309836 CTTNBP2NLQ9P2B4 639 aa16.43■□□□□ 0.22
SPIRE1-201ENST00000309836 UTP11Q9Y3A2 253 aaKnown RBP16.43■□□□□ 0.22
SPIRE1-201ENST00000309836 TMEM110-MUSTN1A8MSY1 372 aa16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 ANKRD63C9JTQ0 380 aa16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 EBAG9O00559 213 aa16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 PMM2O15305 246 aa16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 ZEB2O60315 1214 aa16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 ATP9AO75110 1047 aa16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 MYZAPP0CAP1 466 aa16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 MDH1P40925 334 aaKnown RBP16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 MXI1P50539 228 aa16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 PEX3P56589 373 aa16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 CETN1Q12798 172 aa16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 MTMR3Q13615 1198 aa16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 PGM5Q15124 567 aa16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 DUPD1Q68J44 220 aa16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 C4orf19Q8IY42 314 aa16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 FAM71AQ8IYT1 594 aa16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 UBLCP1Q8WVY7 318 aaPredicted RBP16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 SEMA4DQ92854 862 aa16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 TRIM31Q9BZY9 425 aa16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 EPN3Q9H201 632 aa16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 FAM169AQ9Y6X4 670 aa16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 PFASO15067 1338 aa16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 GOLGA6L10A6NI86 522 aa16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 RTN2O75298 545 aa16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 ADSSP30520 456 aa16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 USP8P40818 1118 aa16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 GPC5P78333 572 aa16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 DR1Q01658 176 aa16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 DHX9Q08211 1270 aaKnown RBP16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 CBWD2Q8IUF1 395 aa16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 AGBL3Q8NEM8 1001 aa16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 EPS8L1Q8TE68 723 aa16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 NAP1L3Q99457 506 aaPredicted RBP16.42■□□□□ 0.22
SPIRE1-201ENST00000309836 ZSWIM1Q9BR11 485 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms