RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 NOP56O00567 594 aaKnown RBP12.95□□□□□ -0.34
TRIM40-205ENST00000307859 TLR2O60603 784 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 KRT13P13646 458 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 UCHL3P15374 230 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 CNGA1P29973 690 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 ADSSP30520 456 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 SLC26A2P50443 739 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 GNG11P61952 73 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 KRT83P78385 493 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 APBA1Q02410 837 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 SFMBT2Q5VUG0 894 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 HGSNATQ68CP4 663 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 TAPT1Q6NXT6 567 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 SLC39A4Q6P5W5 647 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 TAS1R3Q7RTX0 852 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 GPR142Q7Z601 462 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 ASAP3Q8TDY4 903 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 BBXQ8WY36 941 aaPredicted RBP12.95□□□□□ -0.34
TRIM40-205ENST00000307859 SPATA33Q96N06 139 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 WDR24Q96S15 920 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 KATNBL1Q9H079 304 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 PCIF1Q9H4Z3 704 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 PDGFCQ9NRA1 345 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 AIPL1Q9NZN9 384 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 MAFO75444 373 aaPredicted RBP12.95□□□□□ -0.34
TRIM40-205ENST00000307859 PLEKP08567 350 aaPredicted RBP12.95□□□□□ -0.34
TRIM40-205ENST00000307859 TRIM49P0CI25 452 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 TRIM49CP0CI26 452 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 ACTN1P12814 892 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 GLRA2P23416 452 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 MAPK4P31152 587 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 MYL7Q01449 175 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 ARHGAP1Q07960 439 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 ARHGEF6Q15052 776 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 ASTE1Q2TB18 679 aaPredicted RBP12.95□□□□□ -0.34
TRIM40-205ENST00000307859 CBWD6Q4V339 395 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 ARHGAP29Q52LW3 1261 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 BRDTQ58F21 947 aaPredicted RBP12.95□□□□□ -0.34
TRIM40-205ENST00000307859 CBWD3Q5JTY5 395 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 CBWD5Q5RIA9 395 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 CD99L2Q8TCZ2 262 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 ATP8B4Q8TF62 1192 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 COPS5Q92905 334 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 TMEM143Q96AN5 459 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 CCDC42Q96M95 316 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 FBXL18Q96ME1 805 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 HAUS4Q9H6D7 363 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.95□□□□□ -0.34
TRIM40-205ENST00000307859 MYO1AQ9UBC5 1043 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 DAAM1Q9Y4D1 1078 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 FHOD1Q9Y613 1164 aa12.95□□□□□ -0.34
TRIM40-205ENST00000307859 MKI67P46013 3256 aaKnown RBP12.95□□□□□ -0.34
TRIM40-205ENST00000307859 ANK1P16157 1881 aa12.94□□□□□ -0.34
TRIM40-205ENST00000307859 ZNF263O14978 683 aa12.94□□□□□ -0.34
TRIM40-205ENST00000307859 PMM2O15305 246 aa12.94□□□□□ -0.34
TRIM40-205ENST00000307859 P4HA2O15460 535 aa12.94□□□□□ -0.34
TRIM40-205ENST00000307859 CTIFO43310 598 aaKnown RBP12.94□□□□□ -0.34
TRIM40-205ENST00000307859 GAS2O43903 313 aaKnown RBP12.94□□□□□ -0.34
TRIM40-205ENST00000307859 KIF5CO60282 957 aa12.94□□□□□ -0.34
TRIM40-205ENST00000307859 N4BP1O75113 896 aaKnown RBP12.94□□□□□ -0.34
TRIM40-205ENST00000307859 IPO7O95373 1038 aaKnown RBP12.94□□□□□ -0.34
TRIM40-205ENST00000307859 PIGRP01833 764 aa12.94□□□□□ -0.34
TRIM40-205ENST00000307859 SERPING1P05155 500 aa12.94□□□□□ -0.34
TRIM40-205ENST00000307859 ADRB2P07550 413 aa12.94□□□□□ -0.34
TRIM40-205ENST00000307859 GARTP22102 1010 aa12.94□□□□□ -0.34
TRIM40-205ENST00000307859 EIF4A3P38919 411 aaKnown RBP12.94□□□□□ -0.34
TRIM40-205ENST00000307859 VAMP7P51809 220 aa12.94□□□□□ -0.34
TRIM40-205ENST00000307859 KIF11P52732 1056 aa12.94□□□□□ -0.34
TRIM40-205ENST00000307859 JAM2P57087 298 aa12.94□□□□□ -0.34
TRIM40-205ENST00000307859 ENPEPQ07075 957 aa12.94□□□□□ -0.34
TRIM40-205ENST00000307859 SLC9C1Q4G0N8 1177 aa12.94□□□□□ -0.34
TRIM40-205ENST00000307859 TMEM63BQ5T3F8 832 aa12.94□□□□□ -0.34
TRIM40-205ENST00000307859 PLEKHH3Q7Z736 793 aa12.94□□□□□ -0.34
TRIM40-205ENST00000307859 TRIM50Q86XT4 487 aa12.94□□□□□ -0.34
TRIM40-205ENST00000307859 GLG1Q92896 1179 aa12.94□□□□□ -0.34
TRIM40-205ENST00000307859 EMID1Q96A84 441 aaPredicted RBP12.94□□□□□ -0.34
TRIM40-205ENST00000307859 SMARCAD1Q9H4L7 1026 aa12.94□□□□□ -0.34
TRIM40-205ENST00000307859 IGKV6-21A0A0C4DH24 114 aa12.93□□□□□ -0.34
TRIM40-205ENST00000307859 SLC15A5A6NIM6 579 aa12.93□□□□□ -0.34
TRIM40-205ENST00000307859 ZBTB42B2RXF5 422 aa12.93□□□□□ -0.34
TRIM40-205ENST00000307859 RBAK-RBAKDNI3L0D1 243 aa12.93□□□□□ -0.34
TRIM40-205ENST00000307859 DYNC1I1O14576 645 aa12.93□□□□□ -0.34
TRIM40-205ENST00000307859 SP3Q02447 781 aa12.93□□□□□ -0.34
TRIM40-205ENST00000307859 LAMC2Q13753 1193 aa12.93□□□□□ -0.34
TRIM40-205ENST00000307859 RAPGEF1Q13905 1077 aa12.93□□□□□ -0.34
TRIM40-205ENST00000307859 PLCB4Q15147 1175 aa12.93□□□□□ -0.34
TRIM40-205ENST00000307859 SNRNP35Q16560 246 aaKnown RBP12.93□□□□□ -0.34
TRIM40-205ENST00000307859 C1orf220Q5T0J3 134 aa12.93□□□□□ -0.34
TRIM40-205ENST00000307859 EXOC8Q8IYI6 725 aa12.93□□□□□ -0.34
TRIM40-205ENST00000307859 RDH13Q8NBN7 331 aa12.93□□□□□ -0.34
TRIM40-205ENST00000307859 ZSWIM2Q8NEG5 633 aa12.93□□□□□ -0.34
TRIM40-205ENST00000307859 PLEKHO2Q8TD55 490 aa12.93□□□□□ -0.34
TRIM40-205ENST00000307859 MAML3Q96JK9 1138 aa12.93□□□□□ -0.34
TRIM40-205ENST00000307859 IRX2Q9BZI1 471 aaPredicted RBP12.93□□□□□ -0.34
TRIM40-205ENST00000307859 IGF2BP3O00425 579 aaKnown RBP eCLIP12.92□□□□□ -0.34
TRIM40-205ENST00000307859 HNRNPDLO14979 420 aaKnown RBP12.92□□□□□ -0.34
TRIM40-205ENST00000307859 SNAI1O95863 264 aaPredicted RBP12.92□□□□□ -0.34
TRIM40-205ENST00000307859 ABL1P00519 1130 aa12.92□□□□□ -0.34
TRIM40-205ENST00000307859 GH1P01241 217 aa12.92□□□□□ -0.34
TRIM40-205ENST00000307859 CASQ1P31415 396 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms