RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 GCNT4Q9P109 453 aa8.9□□□□□ -0.99
PCDHB1-201ENST00000306549 JRKLQ9Y4A0 524 aa8.9□□□□□ -0.99
PCDHB1-201ENST00000306549 DOT1LQ8TEK3 1739 aa8.9□□□□□ -0.99
PCDHB1-201ENST00000306549 CSPG5O95196 566 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 C6orf222P0C671 652 aaPredicted RBP8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 ABCB4P21439 1286 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 EIF2B5Q13144 721 aaKnown RBP8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 CCNYQ8ND76 341 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 SH3TC2Q8TF17 1288 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 PPP1R9AQ9ULJ8 1098 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 RGPD1P0DJD0 1748 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 HOXA13P31271 388 aaPredicted RBP8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 ESRRGP62508 458 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 MKRN3Q13064 507 aaKnown RBP8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 WHAMMP3Q1A5X7 153 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 PADI6Q6TGC4 694 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 PATL1Q86TB9 770 aaKnown RBP8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 RNF168Q8IYW5 571 aaPredicted RBP8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 TEKT4Q8WW24 435 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 FAM49AQ9H0Q0 323 aaPredicted RBP8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 DYRK4Q9NR20 520 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 TMX2Q9Y320 296 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 ESRRBO95718 433 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 H2AFZP0C0S5 128 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 TCP1P17987 556 aaKnown RBP8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 PRMT2P55345 433 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 PDIA6Q15084 440 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 TYW1BQ6NUM6 668 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 ARHGEF18Q6ZSZ5 1173 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 H2AFVQ71UI9 128 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 LRRC8CQ8TDW0 803 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 TRIM15Q9C019 465 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 VTA1Q9NP79 307 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 DDX41Q9UJV9 622 aaKnown RBP8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 PNPLA4P41247 253 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 CLNS1AP54105 237 aaKnown RBP8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 SLC12A1Q13621 1099 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 SNX17Q15036 470 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 NOTUMQ6P988 496 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 FRA10AC1Q70Z53 315 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 LRRC43Q8N309 656 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 ANKRD42Q8N9B4 389 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 MGARPQ8TDB4 240 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 PPWD1Q96BP3 646 aaKnown RBP8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 CENPKQ9BS16 269 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 HAUS4Q9H6D7 363 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 AP3B1O00203 1094 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 HIP1RO75146 1068 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 PARNO95453 639 aaKnown RBP8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 TFRCP02786 760 aaKnown RBP8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 PDHBP11177 359 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 TBC1D19Q8N5T2 526 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 OTUB1Q96FW1 271 aaPredicted RBP8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 DISP2A7MBM2 1401 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 SGK1O00141 431 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 CTNNA1P35221 906 aaKnown RBP8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 RAP1GDS1P52306 607 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 ZNF484Q5JVG2 852 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 VPS39Q96JC1 886 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 CNOT6LQ96LI5 555 aaKnown RBP8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 STAP1Q9ULZ2 295 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 IGSF9BQ9UPX0 1349 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 HGSO14964 777 aaPredicted RBP8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 PCSK1P29120 753 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 DCAF4L1Q3SXM0 396 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 GNASQ5JWF2 1037 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 EEPD1Q7L9B9 569 aa8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 FAM207AQ9NSI2 230 aaPredicted RBP8.89□□□□□ -0.99
PCDHB1-201ENST00000306549 MRC1P22897 1456 aa8.88□□□□□ -0.99
PCDHB1-201ENST00000306549 CCNE1P24864 410 aa8.88□□□□□ -0.99
PCDHB1-201ENST00000306549 LINC00301Q8NCQ3 95 aa8.88□□□□□ -0.99
PCDHB1-201ENST00000306549 CFAP61Q8NHU2 1237 aa8.88□□□□□ -0.99
PCDHB1-201ENST00000306549 CCSER1Q9C0I3 900 aa8.88□□□□□ -0.99
PCDHB1-201ENST00000306549 TAB2Q9NYJ8 693 aa8.88□□□□□ -0.99
PCDHB1-201ENST00000306549 PRR12Q9ULL5 1215 aa8.88□□□□□ -0.99
PCDHB1-201ENST00000306549 ANKRD36CQ5JPF3 1778 aa8.88□□□□□ -0.99
PCDHB1-201ENST00000306549 GPR182O15218 404 aa8.88□□□□□ -0.99
PCDHB1-201ENST00000306549 ZNF699Q32M78 642 aa8.88□□□□□ -0.99
PCDHB1-201ENST00000306549 PI16Q6UXB8 463 aa8.88□□□□□ -0.99
PCDHB1-201ENST00000306549 MB21D2Q8IYB1 491 aaPredicted RBP8.88□□□□□ -0.99
PCDHB1-201ENST00000306549 ELOA2Q8IYF1 753 aaPredicted RBP8.88□□□□□ -0.99
PCDHB1-201ENST00000306549 IDI2Q9BXS1 227 aa8.88□□□□□ -0.99
PCDHB1-201ENST00000306549 KRT82Q9NSB4 513 aa8.88□□□□□ -0.99
PCDHB1-201ENST00000306549 ZKSCAN5Q9Y2L8 839 aa8.88□□□□□ -0.99
PCDHB1-201ENST00000306549 ALS2Q96Q42 1657 aa8.88□□□□□ -0.99
PCDHB1-201ENST00000306549 TBC1D12O60347 775 aa8.88□□□□□ -0.99
PCDHB1-201ENST00000306549 BAG2O95816 211 aa8.88□□□□□ -0.99
PCDHB1-201ENST00000306549 PPIL2Q13356 520 aa8.88□□□□□ -0.99
PCDHB1-201ENST00000306549 KAZNQ674X7 775 aa8.88□□□□□ -0.99
PCDHB1-201ENST00000306549 ATG16L1Q676U5 607 aa8.88□□□□□ -0.99
PCDHB1-201ENST00000306549 CMTR1Q8N1G2 835 aaKnown RBP8.88□□□□□ -0.99
PCDHB1-201ENST00000306549 LXNQ9BS40 222 aa8.88□□□□□ -0.99
PCDHB1-201ENST00000306549 POLR3CQ9BUI4 534 aaPredicted RBP8.88□□□□□ -0.99
PCDHB1-201ENST00000306549 KIFC3Q9BVG8 833 aa8.88□□□□□ -0.99
PCDHB1-201ENST00000306549 MARF1Q9Y4F3 1742 aaKnown RBP8.88□□□□□ -0.99
PCDHB1-201ENST00000306549 MARK3P27448 753 aa8.88□□□□□ -0.99
PCDHB1-201ENST00000306549 KIAA1755Q5JYT7 1200 aa8.88□□□□□ -0.99
PCDHB1-201ENST00000306549 SPATS2Q86XZ4 545 aaKnown RBP8.88□□□□□ -0.99
PCDHB1-201ENST00000306549 RHOT2Q8IXI1 618 aa8.88□□□□□ -0.99
PCDHB1-201ENST00000306549 TTC30BQ8N4P2 665 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms