RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 SLC26A4O43511 780 aa17■□□□□ 0.31
USP42-201ENST00000306177 PAMP19021 973 aa17■□□□□ 0.31
USP42-201ENST00000306177 SH3BGRP55822 239 aaPredicted RBP17■□□□□ 0.31
USP42-201ENST00000306177 DPYDQ12882 1025 aa17■□□□□ 0.31
USP42-201ENST00000306177 NR1H3Q13133 447 aa17■□□□□ 0.31
USP42-201ENST00000306177 KCNV1Q6PIU1 500 aa17■□□□□ 0.31
USP42-201ENST00000306177 MICALL2Q8IY33 904 aa17■□□□□ 0.31
USP42-201ENST00000306177 SRRM1Q8IYB3 904 aaKnown RBP17■□□□□ 0.31
USP42-201ENST00000306177 LPAR1Q92633 364 aa17■□□□□ 0.31
USP42-201ENST00000306177 RNF25Q96BH1 459 aaPredicted RBP17■□□□□ 0.31
USP42-201ENST00000306177 C7orf25Q9BPX7 421 aa17■□□□□ 0.31
USP42-201ENST00000306177 SENP2Q9HC62 589 aa17■□□□□ 0.31
USP42-201ENST00000306177 FIS1Q9Y3D6 152 aa17■□□□□ 0.31
USP42-201ENST00000306177 ASB14A6NK59 587 aa16.99■□□□□ 0.31
USP42-201ENST00000306177 EFNA5P52803 228 aa16.99■□□□□ 0.31
USP42-201ENST00000306177 SPARCL1Q14515 664 aa16.99■□□□□ 0.31
USP42-201ENST00000306177 GCOM2Q9BZD3 368 aaPredicted RBP16.99■□□□□ 0.31
USP42-201ENST00000306177 RGL1Q9NZL6 768 aa16.99■□□□□ 0.31
USP42-201ENST00000306177 STAP1Q9ULZ2 295 aa16.99■□□□□ 0.31
USP42-201ENST00000306177 INPP5FQ9Y2H2 1132 aa16.99■□□□□ 0.31
USP42-201ENST00000306177 TTC36A6NLP5 189 aa16.99■□□□□ 0.31
USP42-201ENST00000306177 ZNF211Q13398 564 aaPredicted RBP16.99■□□□□ 0.31
USP42-201ENST00000306177 MTMR2Q13614 643 aa16.99■□□□□ 0.31
USP42-201ENST00000306177 TAF1BQ53T94 588 aaPredicted RBP16.99■□□□□ 0.31
USP42-201ENST00000306177 ADSSL1Q8N142 457 aa16.99■□□□□ 0.31
USP42-201ENST00000306177 HEY1Q9Y5J3 304 aa16.99■□□□□ 0.31
USP42-201ENST00000306177 KDM6AO15550 1401 aaPredicted RBP16.99■□□□□ 0.31
USP42-201ENST00000306177 SPATA31D1Q6ZQQ2 1576 aa16.99■□□□□ 0.31
USP42-201ENST00000306177 KRT38O76015 456 aa16.99■□□□□ 0.31
USP42-201ENST00000306177 SLC8A2Q9UPR5 921 aa16.99■□□□□ 0.31
USP42-201ENST00000306177 A0A1B0GTH6 734 aa16.99■□□□□ 0.31
USP42-201ENST00000306177 COPEO14579 308 aa16.99■□□□□ 0.31
USP42-201ENST00000306177 KIAA0391O15091 583 aaKnown RBP16.99■□□□□ 0.31
USP42-201ENST00000306177 NMT1P30419 496 aaKnown RBP16.99■□□□□ 0.31
USP42-201ENST00000306177 PPARGP37231 505 aaPredicted RBP16.99■□□□□ 0.31
USP42-201ENST00000306177 INTS5Q6P9B9 1019 aaKnown RBP16.99■□□□□ 0.31
USP42-201ENST00000306177 CYFIP1Q7L576 1253 aa16.99■□□□□ 0.31
USP42-201ENST00000306177 FASTKD5Q7L8L6 764 aaKnown RBP16.99■□□□□ 0.31
USP42-201ENST00000306177 RHOT1Q8IXI2 618 aa16.99■□□□□ 0.31
USP42-201ENST00000306177 KYAT1Q16773 422 aa16.98■□□□□ 0.31
USP42-201ENST00000306177 DUOXA2Q1HG44 320 aa16.98■□□□□ 0.31
USP42-201ENST00000306177 KLHL38Q2WGJ6 581 aa16.98■□□□□ 0.31
USP42-201ENST00000306177 KAZALD1Q96I82 304 aa16.98■□□□□ 0.31
USP42-201ENST00000306177 DDX56Q9NY93 547 aaKnown RBP16.98■□□□□ 0.31
USP42-201ENST00000306177 ZBTB12Q9Y330 459 aaPredicted RBP16.98■□□□□ 0.31
USP42-201ENST00000306177 MAPK13O15264 365 aa16.98■□□□□ 0.31
USP42-201ENST00000306177 RHOBTB3O94955 611 aa16.98■□□□□ 0.31
USP42-201ENST00000306177 MMEP08473 750 aa16.98■□□□□ 0.31
USP42-201ENST00000306177 COG2Q14746 738 aa16.98■□□□□ 0.31
USP42-201ENST00000306177 ANKRD20A4Q4UJ75 823 aa16.98■□□□□ 0.31
USP42-201ENST00000306177 ANKRD20A8PQ5CZ79 823 aa16.98■□□□□ 0.31
USP42-201ENST00000306177 ANKRD20A2Q5SQ80 823 aa16.98■□□□□ 0.31
USP42-201ENST00000306177 ANKRD20A1Q5TYW2 823 aa16.98■□□□□ 0.31
USP42-201ENST00000306177 MAML1Q92585 1016 aa16.98■□□□□ 0.31
USP42-201ENST00000306177 DDX47Q9H0S4 455 aaKnown RBP16.98■□□□□ 0.31
USP42-201ENST00000306177 HDAC6Q9UBN7 1215 aa16.98■□□□□ 0.31
USP42-201ENST00000306177 MEGF6O75095 1541 aa16.98■□□□□ 0.31
USP42-201ENST00000306177 RASA4BC9J798 803 aa16.98■□□□□ 0.31
USP42-201ENST00000306177 RASA4O43374 803 aa16.98■□□□□ 0.31
USP42-201ENST00000306177 PDHBP11177 359 aa16.98■□□□□ 0.31
USP42-201ENST00000306177 PMS2P54278 862 aa16.98■□□□□ 0.31
USP42-201ENST00000306177 PDZD8Q8NEN9 1154 aa16.98■□□□□ 0.31
USP42-201ENST00000306177 NPHP3-ACAD11A0A0J9YXS1 232 aa16.97■□□□□ 0.31
USP42-201ENST00000306177 FAM187AA6NFU0 413 aa16.97■□□□□ 0.31
USP42-201ENST00000306177 DPF2Q92785 391 aa16.97■□□□□ 0.31
USP42-201ENST00000306177 PPWD1Q96BP3 646 aaKnown RBP16.97■□□□□ 0.31
USP42-201ENST00000306177 EFHD1Q9BUP0 239 aa16.97■□□□□ 0.31
USP42-201ENST00000306177 PITPNM3Q9BZ71 974 aa16.97■□□□□ 0.31
USP42-201ENST00000306177 SLITRK6Q9H5Y7 841 aa16.97■□□□□ 0.31
USP42-201ENST00000306177 FAM217BQ9NTX9 383 aaPredicted RBP16.97■□□□□ 0.31
USP42-201ENST00000306177 MRFAP1Q9Y605 127 aa16.97■□□□□ 0.31
USP42-201ENST00000306177 F8W8V4 182 aa16.97■□□□□ 0.31
USP42-201ENST00000306177 MAP3K14Q99558 947 aa16.97■□□□□ 0.31
USP42-201ENST00000306177 ZNF70Q9UC06 446 aaPredicted RBP16.97■□□□□ 0.31
USP42-201ENST00000306177 PCSK1NQ9UHG2 260 aa16.97■□□□□ 0.31
USP42-201ENST00000306177 CNOT7Q9UIV1 285 aaKnown RBP16.97■□□□□ 0.31
USP42-201ENST00000306177 STXBP3O00186 592 aa16.97■□□□□ 0.31
USP42-201ENST00000306177 GGPS1O95749 300 aa16.97■□□□□ 0.31
USP42-201ENST00000306177 ESRRAP11474 423 aaPredicted RBP16.97■□□□□ 0.31
USP42-201ENST00000306177 FDPSP14324 419 aaKnown RBP16.97■□□□□ 0.31
USP42-201ENST00000306177 NCF2P19878 526 aaPredicted RBP16.97■□□□□ 0.31
USP42-201ENST00000306177 STAT5BP51692 787 aa16.97■□□□□ 0.31
USP42-201ENST00000306177 CRLF3Q8IUI8 442 aa16.97■□□□□ 0.31
USP42-201ENST00000306177 AGPAT1Q99943 283 aa16.97■□□□□ 0.31
USP42-201ENST00000306177 NOC2LQ9Y3T9 749 aaKnown RBP16.97■□□□□ 0.31
USP42-201ENST00000306177 HSPA8P11142 646 aaKnown RBP16.97■□□□□ 0.31
USP42-201ENST00000306177 GPR75-ASB3A0A0A6YYF3 556 aa16.96■□□□□ 0.31
USP42-201ENST00000306177 DGAT1O75907 488 aa16.96■□□□□ 0.31
USP42-201ENST00000306177 TAC1P20366 129 aa16.96■□□□□ 0.31
USP42-201ENST00000306177 GGCXP38435 758 aa16.96■□□□□ 0.31
USP42-201ENST00000306177 SLC12A1Q13621 1099 aa16.96■□□□□ 0.31
USP42-201ENST00000306177 RSBN1LQ6PCB5 846 aaPredicted RBP16.96■□□□□ 0.31
USP42-201ENST00000306177 LRRC31Q6UY01 552 aa16.96■□□□□ 0.31
USP42-201ENST00000306177 SCN4BQ8IWT1 228 aa16.96■□□□□ 0.31
USP42-201ENST00000306177 TEX13BQ9BXU2 312 aa16.96■□□□□ 0.31
USP42-201ENST00000306177 CHEK2O96017 543 aa16.96■□□□□ 0.31
USP42-201ENST00000306177 TAP1Q03518 808 aa16.96■□□□□ 0.31
USP42-201ENST00000306177 TTC17Q96AE7 1141 aa16.96■□□□□ 0.31
USP42-201ENST00000306177 SPDL1Q96EA4 605 aa16.96■□□□□ 0.31
USP42-201ENST00000306177 ZNF668Q96K58 619 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms