RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 UBN1Q9NPG3 1134 aa29.29■■■□□ 2.28
CDKN2A-201ENST00000304494 INPP5FQ9Y2H2 1132 aa29.29■■■□□ 2.28
CDKN2A-201ENST00000304494 MEIS3P2A8K0S8 358 aa29.28■■■□□ 2.28
CDKN2A-201ENST00000304494 H3BQ06 376 aaPredicted RBP29.28■■■□□ 2.28
CDKN2A-201ENST00000304494 PDCP20941 246 aa29.28■■■□□ 2.28
CDKN2A-201ENST00000304494 PBX3P40426 434 aa29.28■■■□□ 2.28
CDKN2A-201ENST00000304494 BCAR1P56945 870 aa29.28■■■□□ 2.28
CDKN2A-201ENST00000304494 IL17AQ16552 155 aa29.28■■■□□ 2.28
CDKN2A-201ENST00000304494 AMHR2Q16671 573 aa29.28■■■□□ 2.28
CDKN2A-201ENST00000304494 AGMOQ6ZNB7 445 aa29.28■■■□□ 2.28
CDKN2A-201ENST00000304494 BRAPQ7Z569 592 aa29.28■■■□□ 2.28
CDKN2A-201ENST00000304494 SLC39A11Q8N1S5 342 aa29.28■■■□□ 2.28
CDKN2A-201ENST00000304494 CPB2Q96IY4 423 aa29.28■■■□□ 2.28
CDKN2A-201ENST00000304494 CSRNP2Q9H175 543 aa29.28■■■□□ 2.28
CDKN2A-201ENST00000304494 C2orf40Q9H1Z8 148 aa29.28■■■□□ 2.28
CDKN2A-201ENST00000304494 RSAD1Q9HA92 442 aa29.28■■■□□ 2.28
CDKN2A-201ENST00000304494 TBC1D13Q9NVG8 400 aa29.28■■■□□ 2.28
CDKN2A-201ENST00000304494 DNM3Q9UQ16 869 aa29.28■■■□□ 2.28
CDKN2A-201ENST00000304494 FSD2A1L4K1 749 aa29.27■■■□□ 2.28
CDKN2A-201ENST00000304494 PPP2R5AQ15172 486 aa29.27■■■□□ 2.28
CDKN2A-201ENST00000304494 ARL6IP4Q66PJ3 421 aaKnown RBP29.27■■■□□ 2.28
CDKN2A-201ENST00000304494 CDCA2Q69YH5 1023 aaPredicted RBP29.27■■■□□ 2.28
CDKN2A-201ENST00000304494 PTCRAQ6ISU1 281 aaPredicted RBP29.27■■■□□ 2.28
CDKN2A-201ENST00000304494 ADGRD2Q7Z7M1 963 aa29.27■■■□□ 2.28
CDKN2A-201ENST00000304494 PRIMPOLQ96LW4 560 aa29.27■■■□□ 2.28
CDKN2A-201ENST00000304494 PRMT7Q9NVM4 692 aaPredicted RBP29.27■■■□□ 2.28
CDKN2A-201ENST00000304494 KANSL3Q9P2N6 904 aa29.27■■■□□ 2.28
CDKN2A-201ENST00000304494 FAM50BQ9Y247 325 aa29.27■■■□□ 2.28
CDKN2A-201ENST00000304494 PP2D1A8MPX8 630 aa29.26■■■□□ 2.27
CDKN2A-201ENST00000304494 ZC3H11AO75152 810 aaKnown RBP eCLIP29.26■■■□□ 2.27
CDKN2A-201ENST00000304494 ITGA4P13612 1032 aa29.26■■■□□ 2.27
CDKN2A-201ENST00000304494 ARF4P18085 180 aaPredicted RBP29.26■■■□□ 2.27
CDKN2A-201ENST00000304494 GTF2F1P35269 517 aaKnown RBP eCLIP29.26■■■□□ 2.27
CDKN2A-201ENST00000304494 NAMPTP43490 491 aa29.26■■■□□ 2.27
CDKN2A-201ENST00000304494 NRIP1P48552 1158 aa29.26■■■□□ 2.27
CDKN2A-201ENST00000304494 ERVFC1P60507 584 aa29.26■■■□□ 2.27
CDKN2A-201ENST00000304494 ADAM15Q13444 863 aa29.26■■■□□ 2.27
CDKN2A-201ENST00000304494 PPP4R3CPQ6ZMV5 832 aa29.26■■■□□ 2.27
CDKN2A-201ENST00000304494 HACE1Q8IYU2 909 aa29.26■■■□□ 2.27
CDKN2A-201ENST00000304494 EFHBQ8N7U6 833 aa29.26■■■□□ 2.27
CDKN2A-201ENST00000304494 KIFAP3Q92845 792 aa29.26■■■□□ 2.27
CDKN2A-201ENST00000304494 NECAB3Q96P71 396 aaPredicted RBP29.26■■■□□ 2.27
CDKN2A-201ENST00000304494 TRIM6Q9C030 488 aaPredicted RBP29.26■■■□□ 2.27
CDKN2A-201ENST00000304494 TLE6Q9H808 572 aa29.26■■■□□ 2.27
CDKN2A-201ENST00000304494 NGRNQ9NPE2 291 aaKnown RBP29.26■■■□□ 2.27
CDKN2A-201ENST00000304494 IPPQ9Y573 584 aa29.26■■■□□ 2.27
CDKN2A-201ENST00000304494 FSCN2O14926 492 aa29.25■■■□□ 2.27
CDKN2A-201ENST00000304494 EYA4O95677 639 aa29.25■■■□□ 2.27
CDKN2A-201ENST00000304494 LTBRP36941 435 aa29.25■■■□□ 2.27
CDKN2A-201ENST00000304494 KCTD17Q8N5Z5 321 aa29.25■■■□□ 2.27
CDKN2A-201ENST00000304494 SMG8Q8ND04 991 aaKnown RBP29.25■■■□□ 2.27
CDKN2A-201ENST00000304494 IFT74Q96LB3 600 aa29.25■■■□□ 2.27
CDKN2A-201ENST00000304494 CDCA3Q99618 268 aaPredicted RBP29.25■■■□□ 2.27
CDKN2A-201ENST00000304494 TCF25Q9BQ70 676 aa29.25■■■□□ 2.27
CDKN2A-201ENST00000304494 EIF2AQ9BY44 585 aaKnown RBP29.25■■■□□ 2.27
CDKN2A-201ENST00000304494 ENTPD7Q9NQZ7 604 aa29.25■■■□□ 2.27
CDKN2A-201ENST00000304494 GRXCR2A6NFK2 248 aa29.24■■■□□ 2.27
CDKN2A-201ENST00000304494 B4GALT5O43286 388 aa29.24■■■□□ 2.27
CDKN2A-201ENST00000304494 BMP15O95972 392 aa29.24■■■□□ 2.27
CDKN2A-201ENST00000304494 CDC25AP30304 524 aa29.24■■■□□ 2.27
CDKN2A-201ENST00000304494 SLC27A1Q6PCB7 646 aa29.24■■■□□ 2.27
CDKN2A-201ENST00000304494 RBM23Q86U06 439 aaKnown RBP29.24■■■□□ 2.27
CDKN2A-201ENST00000304494 DEPTORQ8TB45 409 aa29.24■■■□□ 2.27
CDKN2A-201ENST00000304494 TMEM169Q96HH4 297 aa29.24■■■□□ 2.27
CDKN2A-201ENST00000304494 NRDE2Q9H7Z3 1164 aa29.24■■■□□ 2.27
CDKN2A-201ENST00000304494 PCDHGC5Q9Y5F6 944 aa29.24■■■□□ 2.27
CDKN2A-201ENST00000304494 TCF20Q9UGU0 1960 aaKnown RBP29.24■■■□□ 2.27
CDKN2A-201ENST00000304494 A0A1B0GUA9 196 aa29.23■■■□□ 2.27
CDKN2A-201ENST00000304494 VPS37CA5D8V6 355 aaPredicted RBP29.23■■■□□ 2.27
CDKN2A-201ENST00000304494 VWA3AA6NCI4 1184 aa29.23■■■□□ 2.27
CDKN2A-201ENST00000304494 NDUFV1P49821 464 aa29.23■■■□□ 2.27
CDKN2A-201ENST00000304494 BMS1Q14692 1282 aaKnown RBP29.23■■■□□ 2.27
CDKN2A-201ENST00000304494 MAPK6Q16659 721 aa29.23■■■□□ 2.27
CDKN2A-201ENST00000304494 FAM187BQ17R55 369 aa29.23■■■□□ 2.27
CDKN2A-201ENST00000304494 PLPP4Q5VZY2 271 aa29.23■■■□□ 2.27
CDKN2A-201ENST00000304494 BSNDQ8WZ55 320 aa29.23■■■□□ 2.27
CDKN2A-201ENST00000304494 INTS4Q96HW7 963 aaKnown RBP29.23■■■□□ 2.27
CDKN2A-201ENST00000304494 FAM193BQ96PV7 902 aaPredicted RBP29.23■■■□□ 2.27
CDKN2A-201ENST00000304494 MMTAG2Q9BU76 263 aaKnown RBP29.23■■■□□ 2.27
CDKN2A-201ENST00000304494 NT5C3AQ9H0P0 336 aa29.23■■■□□ 2.27
CDKN2A-201ENST00000304494 FZD8Q9H461 694 aa29.23■■■□□ 2.27
CDKN2A-201ENST00000304494 TTC28Q96AY4 2481 aa29.22■■■□□ 2.27
CDKN2A-201ENST00000304494 NT5C1B-RDH14C9J2C7 533 aa29.22■■■□□ 2.27
CDKN2A-201ENST00000304494 E9PMD0 336 aa29.22■■■□□ 2.27
CDKN2A-201ENST00000304494 LINC01565O15544 149 aa29.22■■■□□ 2.27
CDKN2A-201ENST00000304494 TBX10O75333 385 aa29.22■■■□□ 2.27
CDKN2A-201ENST00000304494 TMC7Q7Z402 723 aa29.22■■■□□ 2.27
CDKN2A-201ENST00000304494 GBP3Q9H0R5 595 aa29.22■■■□□ 2.27
CDKN2A-201ENST00000304494 BRWD1Q9NSI6 2320 aa29.22■■■□□ 2.27
CDKN2A-201ENST00000304494 MYO7AQ13402 2215 aa29.21■■■□□ 2.27
CDKN2A-201ENST00000304494 GALTP07902 379 aa29.21■■■□□ 2.27
CDKN2A-201ENST00000304494 EFNA5P52803 228 aa29.21■■■□□ 2.27
CDKN2A-201ENST00000304494 DLX2Q07687 328 aaPredicted RBP29.21■■■□□ 2.27
CDKN2A-201ENST00000304494 DUSP6Q16828 381 aa29.21■■■□□ 2.27
CDKN2A-201ENST00000304494 HYIQ5T013 277 aa29.21■■■□□ 2.27
CDKN2A-201ENST00000304494 AK8Q96MA6 479 aa29.21■■■□□ 2.27
CDKN2A-201ENST00000304494 GIT1Q9Y2X7 761 aa29.21■■■□□ 2.27
CDKN2A-201ENST00000304494 K7ELQ4 463 aaPredicted RBP29.2■■■□□ 2.26
CDKN2A-201ENST00000304494 INPPL1O15357 1258 aa29.2■■■□□ 2.26
CDKN2A-201ENST00000304494 IL9P15248 144 aa29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms