RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 EFNA5P52803 228 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 SMTNP53814 917 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 TFDP1Q14186 410 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 LRRC8DQ7L1W4 858 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 RSPH3Q86UC2 560 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 MLKLQ8NB16 471 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 DEPTORQ8TB45 409 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 ZBTB45Q96K62 511 aaPredicted RBP10.43□□□□□ -0.74
RFX3-201ENST00000302303 DUSP9Q99956 384 aaKnown RBP10.43□□□□□ -0.74
RFX3-201ENST00000302303 TARS2Q9BW92 718 aaKnown RBP10.43□□□□□ -0.74
RFX3-201ENST00000302303 GCOM2Q9BZD3 368 aaPredicted RBP10.43□□□□□ -0.74
RFX3-201ENST00000302303 TMX1Q9H3N1 280 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 HIPK3Q9H422 1215 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 ERVK-5Q9HDB9 667 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 TMEM39AQ9NV64 488 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 KCNG1Q9UIX4 513 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 GINS2Q9Y248 185 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 PCDHB13Q9Y5F0 798 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 STYXL1Q9Y6J8 313 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 SQORQ9Y6N5 450 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 PHLPP2Q6ZVD8 1323 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 INO80B-WBP1J3KQ70 363 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 MGEA5O60502 916 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 GHRP10912 638 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 ARF4P18085 180 aaPredicted RBP10.43□□□□□ -0.74
RFX3-201ENST00000302303 PROZP22891 400 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 PHKA2P46019 1235 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 CCL23P55773 120 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 BFSP2Q13515 415 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 DSC3Q14574 896 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 KNOP1Q1ED39 458 aaKnown RBP10.43□□□□□ -0.74
RFX3-201ENST00000302303 EEF1DP3Q658K8 133 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 ANKRD40Q6AI12 368 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 TTI2Q6NXR4 508 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 RTN4RL1Q86UN2 441 aaPredicted RBP10.43□□□□□ -0.74
RFX3-201ENST00000302303 GAS2L3Q86XJ1 694 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 NELFCDQ8IXH7 590 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 MYOCDQ8IZQ8 938 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 SLC17A8Q8NDX2 589 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 ZSWIM2Q8NEG5 633 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 TMEM174Q8WUU8 243 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 HVCN1Q96D96 273 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 SCLYQ96I15 445 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 ACO2Q99798 780 aaKnown RBP10.43□□□□□ -0.74
RFX3-201ENST00000302303 PPP1R12CQ9BZL4 782 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 INO80BQ9C086 356 aaPredicted RBP10.43□□□□□ -0.74
RFX3-201ENST00000302303 C2orf40Q9H1Z8 148 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 DMAC2Q9NW81 257 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 PADI3Q9ULW8 664 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 ST3GAL5Q9UNP4 418 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 TRAF3IP3Q9Y228 551 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 TNRC18O15417 2968 aaPredicted RBP10.42□□□□□ -0.74
RFX3-201ENST00000302303 A0A1B0GUA9 196 aa10.42□□□□□ -0.74
RFX3-201ENST00000302303 TRIM49BA6NDI0 452 aa10.42□□□□□ -0.74
RFX3-201ENST00000302303 MEFVO15553 781 aaPredicted RBP10.42□□□□□ -0.74
RFX3-201ENST00000302303 FAM189A1O60320 539 aa10.42□□□□□ -0.74
RFX3-201ENST00000302303 TIMP1P01033 207 aa10.42□□□□□ -0.74
RFX3-201ENST00000302303 CXCL10P02778 98 aa10.42□□□□□ -0.74
RFX3-201ENST00000302303 PRKCBP05771 671 aa10.42□□□□□ -0.74
RFX3-201ENST00000302303 SCP2P22307 547 aa10.42□□□□□ -0.74
RFX3-201ENST00000302303 CD52P31358 61 aa10.42□□□□□ -0.74
RFX3-201ENST00000302303 ALCAMQ13740 583 aa10.42□□□□□ -0.74
RFX3-201ENST00000302303 NCAPHQ15003 741 aa10.42□□□□□ -0.74
RFX3-201ENST00000302303 MAPK6Q16659 721 aa10.42□□□□□ -0.74
RFX3-201ENST00000302303 PLEKHG4Q58EX7 1191 aa10.42□□□□□ -0.74
RFX3-201ENST00000302303 UBXN11Q5T124 520 aa10.42□□□□□ -0.74
RFX3-201ENST00000302303 SASS6Q6UVJ0 657 aa10.42□□□□□ -0.74
RFX3-201ENST00000302303 LRSAM1Q6UWE0 723 aa10.42□□□□□ -0.74
RFX3-201ENST00000302303 TSHZ1Q6ZSZ6 1077 aa10.42□□□□□ -0.74
RFX3-201ENST00000302303 CDR2LQ86X02 465 aaPredicted RBP10.42□□□□□ -0.74
RFX3-201ENST00000302303 ZC3H3Q8IXZ2 948 aaKnown RBP10.42□□□□□ -0.74
RFX3-201ENST00000302303 LINC01599Q8WXQ3 324 aa10.42□□□□□ -0.74
RFX3-201ENST00000302303 CPB2Q96IY4 423 aa10.42□□□□□ -0.74
RFX3-201ENST00000302303 DNAJC25Q9H1X3 360 aa10.42□□□□□ -0.74
RFX3-201ENST00000302303 HSD3B7Q9H2F3 369 aa10.42□□□□□ -0.74
RFX3-201ENST00000302303 AGPAT5Q9NUQ2 364 aa10.42□□□□□ -0.74
RFX3-201ENST00000302303 PRMT7Q9NVM4 692 aaPredicted RBP10.42□□□□□ -0.74
RFX3-201ENST00000302303 TET1Q8NFU7 2136 aa10.41□□□□□ -0.74
RFX3-201ENST00000302303 SCN5AQ14524 2016 aa10.41□□□□□ -0.74
RFX3-201ENST00000302303 UBE4BO95155 1302 aa10.41□□□□□ -0.74
RFX3-201ENST00000302303 CNTNAP2Q9UHC6 1331 aa10.41□□□□□ -0.74
RFX3-201ENST00000302303 H0YCG3 227 aa10.41□□□□□ -0.74
RFX3-201ENST00000302303 PDXKO00764 312 aa10.41□□□□□ -0.74
RFX3-201ENST00000302303 RPS6KA5O75582 802 aa10.41□□□□□ -0.74
RFX3-201ENST00000302303 CCNE1P24864 410 aa10.41□□□□□ -0.74
RFX3-201ENST00000302303 IQCB1Q15051 598 aa10.41□□□□□ -0.74
RFX3-201ENST00000302303 STX1AQ16623 288 aa10.41□□□□□ -0.74
RFX3-201ENST00000302303 ANO6Q4KMQ2 910 aa10.41□□□□□ -0.74
RFX3-201ENST00000302303 FOXR2Q6PJQ5 311 aa10.41□□□□□ -0.74
RFX3-201ENST00000302303 ZPBP2Q6X784 338 aa10.41□□□□□ -0.74
RFX3-201ENST00000302303 C16orf59Q7L2K0 433 aa10.41□□□□□ -0.74
RFX3-201ENST00000302303 IRF2BP1Q8IU81 584 aa10.41□□□□□ -0.74
RFX3-201ENST00000302303 ZBTB8OSQ8IWT0 167 aa10.41□□□□□ -0.74
RFX3-201ENST00000302303 P2RX5Q93086 422 aa10.41□□□□□ -0.74
RFX3-201ENST00000302303 CCDC47Q96A33 483 aaKnown RBP10.41□□□□□ -0.74
RFX3-201ENST00000302303 DHTKD1Q96HY7 919 aaPredicted RBP10.41□□□□□ -0.74
RFX3-201ENST00000302303 PRIMPOLQ96LW4 560 aa10.41□□□□□ -0.74
RFX3-201ENST00000302303 ACCSQ96QU6 501 aa10.41□□□□□ -0.74
RFX3-201ENST00000302303 GTPBP4Q9BZE4 634 aaKnown RBP10.41□□□□□ -0.74
RFX3-201ENST00000302303 PDZD7Q9H5P4 517 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms