RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 ACER1Q8TDN7 264 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 MICAL1Q8TDZ2 1067 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 AENQ8WTP8 325 aaKnown RBP15.1■□□□□ 0.01
SDC2-201ENST00000302190 CNKSR1Q969H4 720 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 RNF25Q96BH1 459 aaPredicted RBP15.1■□□□□ 0.01
SDC2-201ENST00000302190 FAM84AQ96KN4 292 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 CD248Q9HCU0 757 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 USP20Q9Y2K6 914 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 LRP5O75197 1615 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 ATP2A1O14983 1001 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 LONRF1Q17RB8 773 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 FIGNQ5HY92 759 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 SYCP2LQ5T4T6 812 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 TPCN2Q8NHX9 752 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 RFFLQ8WZ73 363 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 BAP1Q92560 729 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 PI4K2AQ9BTU6 479 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 RAVER2Q9HCJ3 691 aaKnown RBP15.1■□□□□ 0.01
SDC2-201ENST00000302190 GPRC5CQ9NQ84 441 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 CNOT8Q9UFF9 292 aaKnown RBP15.1■□□□□ 0.01
SDC2-201ENST00000302190 COL11A2P13942 1736 aaPredicted RBP15.1■□□□□ 0.01
SDC2-201ENST00000302190 MYH7P12883 1935 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 PDXKO00764 312 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 NPEPPSP55786 919 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 GIT2Q14161 759 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 SLC29A2Q14542 456 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 C10orf76Q5T2E6 689 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 FRMD5Q7Z6J6 570 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 PPP1R14CQ8TAE6 165 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 SEPT9Q9UHD8 586 aaPredicted RBP15.09■□□□□ 0.01
SDC2-201ENST00000302190 ALG6Q9Y672 507 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 MYH2Q9UKX2 1941 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 FAM86B1E9PN63 330 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 FAM86B2P0C5J1 330 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 PEX19P40855 299 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 STRN3Q13033 797 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 CYFIP1Q7L576 1253 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 ARHGEF2Q92974 986 aaKnown RBP15.09■□□□□ 0.01
SDC2-201ENST00000302190 KLHL29Q96CT2 875 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 C18orf8Q96DM3 657 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 NUP85Q9BW27 656 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 ZNF341Q9BYN7 854 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 PPP1R12CQ9BZL4 782 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 PRR12Q9ULL5 1215 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 YDJCA8MPS7 323 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 CLDN3O15551 220 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 TLR2O60603 784 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 CALCAP01258 141 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 LACTBP83111 547 aaPredicted RBP15.09■□□□□ 0.01
SDC2-201ENST00000302190 DMP1Q13316 513 aaPredicted RBP15.09■□□□□ 0.01
SDC2-201ENST00000302190 AP3B2Q13367 1082 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 TTLL12Q14166 644 aaPredicted RBP15.09■□□□□ 0.01
SDC2-201ENST00000302190 MTERF2Q49AM1 385 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 HHATQ5VTY9 493 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 KIRREL3Q8IZU9 778 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 SUPT20HQ8NEM7 779 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 MYCBPAPQ8TBZ2 947 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 FBXO25Q8TCJ0 367 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 SLC20A1Q8WUM9 679 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 SGSM3Q96HU1 749 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 FAM20AQ96MK3 541 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 MTMR9Q96QG7 549 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 C11orf70Q9BRQ4 267 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 EDEM3Q9BZQ6 932 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 KMT5AQ9NQR1 393 aa15.09■□□□□ 0.01
SDC2-201ENST00000302190 ZNF233A6NK53 670 aa15.08■□□□□ 0.01
SDC2-201ENST00000302190 VAMP7P51809 220 aa15.08■□□□□ 0.01
SDC2-201ENST00000302190 PTGISQ16647 500 aa15.08■□□□□ 0.01
SDC2-201ENST00000302190 PLA2G4FQ68DD2 849 aa15.08■□□□□ 0.01
SDC2-201ENST00000302190 ZNF449Q6P9G9 518 aa15.08■□□□□ 0.01
SDC2-201ENST00000302190 SPIRE2Q8WWL2 714 aa15.08■□□□□ 0.01
SDC2-201ENST00000302190 CYFIP2Q96F07 1278 aa15.08■□□□□ 0.01
SDC2-201ENST00000302190 CALR3Q96L12 384 aaKnown RBP15.08■□□□□ 0.01
SDC2-201ENST00000302190 PPP1R16BQ96T49 567 aa15.08■□□□□ 0.01
SDC2-201ENST00000302190 MYH10P35580 1976 aa15.08■□□□□ 0
SDC2-201ENST00000302190 RPA1P27694 616 aa15.08■□□□□ 0
SDC2-201ENST00000302190 SMAD1Q15797 465 aaKnown RBP15.08■□□□□ 0
SDC2-201ENST00000302190 RINT1Q6NUQ1 792 aa15.08■□□□□ 0
SDC2-201ENST00000302190 CTAGE3PQ8IX95 158 aa15.08■□□□□ 0
SDC2-201ENST00000302190 HVCN1Q96D96 273 aa15.08■□□□□ 0
SDC2-201ENST00000302190 C9orf72Q96LT7 481 aa15.08■□□□□ 0
SDC2-201ENST00000302190 POP1Q99575 1024 aaKnown RBP15.08■□□□□ 0
SDC2-201ENST00000302190 PRMT1Q99873 361 aaKnown RBP15.08■□□□□ 0
SDC2-201ENST00000302190 EXOC7Q9UPT5 735 aa15.08■□□□□ 0
SDC2-201ENST00000302190 PI4K2BG5E9Z4 385 aa15.08■□□□□ 0
SDC2-201ENST00000302190 EML1O00423 815 aa15.08■□□□□ 0
SDC2-201ENST00000302190 RGL2O15211 777 aa15.08■□□□□ 0
SDC2-201ENST00000302190 CHN1P15882 459 aa15.08■□□□□ 0
SDC2-201ENST00000302190 MFAP3P55082 362 aa15.08■□□□□ 0
SDC2-201ENST00000302190 RHBDL3P58872 404 aa15.08■□□□□ 0
SDC2-201ENST00000302190 LIN9Q5TKA1 542 aa15.08■□□□□ 0
SDC2-201ENST00000302190 NAIF1Q69YI7 327 aaPredicted RBP15.08■□□□□ 0
SDC2-201ENST00000302190 DNAJC19Q96DA6 116 aa15.08■□□□□ 0
SDC2-201ENST00000302190 FAM213AQ9BRX8 229 aa15.08■□□□□ 0
SDC2-201ENST00000302190 WDR11Q9BZH6 1224 aa15.08■□□□□ 0
SDC2-201ENST00000302190 ANAPC5Q9UJX4 755 aa15.08■□□□□ 0
SDC2-201ENST00000302190 PPP1R9AQ9ULJ8 1098 aa15.08■□□□□ 0
SDC2-201ENST00000302190 PCDHB4Q9Y5E5 795 aa15.08■□□□□ 0
SDC2-201ENST00000302190 PRELPP51888 382 aa15.07■□□□□ 0
SDC2-201ENST00000302190 GPC5P78333 572 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms