RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 SGO1Q5FBB7 561 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 CCHCR1Q8TD31 782 aa13.13□□□□□ -0.31
ABCA3-201ENST00000301732 RNF26Q9BY78 433 aaPredicted RBP13.13□□□□□ -0.31
ABCA3-201ENST00000301732 LIMA1Q9UHB6 759 aaKnown RBP13.13□□□□□ -0.31
ABCA3-201ENST00000301732 ZBTB39O15060 712 aa13.12□□□□□ -0.31
ABCA3-201ENST00000301732 MED7O43513 233 aa13.12□□□□□ -0.31
ABCA3-201ENST00000301732 WDR47O94967 919 aa13.12□□□□□ -0.31
ABCA3-201ENST00000301732 YY1P25490 414 aa13.12□□□□□ -0.31
ABCA3-201ENST00000301732 CCDC15Q0P6D6 951 aa13.12□□□□□ -0.31
ABCA3-201ENST00000301732 SPDYAQ5MJ70 313 aa13.12□□□□□ -0.31
ABCA3-201ENST00000301732 TBC1D10CQ8IV04 446 aa13.12□□□□□ -0.31
ABCA3-201ENST00000301732 SH3RF3Q8TEJ3 882 aaPredicted RBP13.12□□□□□ -0.31
ABCA3-201ENST00000301732 CUEDC2Q9H467 287 aa13.12□□□□□ -0.31
ABCA3-201ENST00000301732 DHX35Q9H5Z1 703 aaKnown RBP13.12□□□□□ -0.31
ABCA3-201ENST00000301732 ZBTB1Q9Y2K1 713 aa13.12□□□□□ -0.31
ABCA3-201ENST00000301732 MAP3K6O95382 1288 aa13.12□□□□□ -0.31
ABCA3-201ENST00000301732 ARSEP51690 589 aa13.12□□□□□ -0.31
ABCA3-201ENST00000301732 TOB2Q14106 344 aaPredicted RBP13.12□□□□□ -0.31
ABCA3-201ENST00000301732 SYDE2Q5VT97 1194 aa13.12□□□□□ -0.31
ABCA3-201ENST00000301732 ZNF473Q8WTR7 871 aaKnown RBP13.12□□□□□ -0.31
ABCA3-201ENST00000301732 SPON2Q9BUD6 331 aa13.12□□□□□ -0.31
ABCA3-201ENST00000301732 CELF4Q9BZC1 486 aaKnown RBP13.12□□□□□ -0.31
ABCA3-201ENST00000301732 SCP2P22307 547 aa13.12□□□□□ -0.31
ABCA3-201ENST00000301732 SERPINB4P48594 390 aa13.12□□□□□ -0.31
ABCA3-201ENST00000301732 DRAP1Q14919 205 aaPredicted RBP13.12□□□□□ -0.31
ABCA3-201ENST00000301732 THEMIS2Q5TEJ8 643 aa13.12□□□□□ -0.31
ABCA3-201ENST00000301732 CPA5Q8WXQ8 436 aa13.12□□□□□ -0.31
ABCA3-201ENST00000301732 FAM136AQ96C01 138 aa13.12□□□□□ -0.31
ABCA3-201ENST00000301732 ABHD8Q96I13 439 aa13.12□□□□□ -0.31
ABCA3-201ENST00000301732 BEGAINQ9BUH8 593 aa13.12□□□□□ -0.31
ABCA3-201ENST00000301732 WDR17Q8IZU2 1322 aa13.12□□□□□ -0.31
ABCA3-201ENST00000301732 SMARCA1P28370 1054 aa13.12□□□□□ -0.31
ABCA3-201ENST00000301732 NME5P56597 212 aa13.12□□□□□ -0.31
ABCA3-201ENST00000301732 IZUMO3Q5VZ72 239 aa13.12□□□□□ -0.31
ABCA3-201ENST00000301732 EMBQ6PCB8 327 aa13.12□□□□□ -0.31
ABCA3-201ENST00000301732 TBC1D22AQ8WUA7 517 aa13.12□□□□□ -0.31
ABCA3-201ENST00000301732 ATP6V0A1Q93050 837 aa13.12□□□□□ -0.31
ABCA3-201ENST00000301732 CLMNQ96JQ2 1002 aa13.12□□□□□ -0.31
ABCA3-201ENST00000301732 RAVER2Q9HCJ3 691 aaKnown RBP13.12□□□□□ -0.31
ABCA3-201ENST00000301732 EXOSC4Q9NPD3 245 aaKnown RBP13.12□□□□□ -0.31
ABCA3-201ENST00000301732 RASSF10A6NK89 507 aa13.12□□□□□ -0.31
ABCA3-201ENST00000301732 MYL3P08590 195 aa13.12□□□□□ -0.31
ABCA3-201ENST00000301732 ZSCAN20P17040 1043 aaPredicted RBP13.12□□□□□ -0.31
ABCA3-201ENST00000301732 SRP68Q9UHB9 627 aaKnown RBP13.12□□□□□ -0.31
ABCA3-201ENST00000301732 INSRP06213 1382 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 NBPF26B4DH59 902 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 EIF3BP55884 814 aaKnown RBP13.11□□□□□ -0.31
ABCA3-201ENST00000301732 OVGP1Q12889 678 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 RESP18Q5W5W9 173 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 NBPF15Q8N660 670 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 ATP6V1G3Q96LB4 118 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 SLC12A6Q9UHW9 1150 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 URB2Q14146 1524 aaKnown RBP13.11□□□□□ -0.31
ABCA3-201ENST00000301732 ZCCHC18P0CG32 403 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 BMP3P12645 472 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 TYK2P29597 1187 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 CDC25CP30307 473 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 PLOD1Q02809 727 aaPredicted RBP13.11□□□□□ -0.31
ABCA3-201ENST00000301732 TRAF7Q6Q0C0 670 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 C20orf96Q9NUD7 363 aaPredicted RBP13.11□□□□□ -0.31
ABCA3-201ENST00000301732 MRPL42Q9Y6G3 142 aaKnown RBP13.11□□□□□ -0.31
ABCA3-201ENST00000301732 DENND4BO75064 1496 aaPredicted RBP13.11□□□□□ -0.31
ABCA3-201ENST00000301732 ORC4O43929 436 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 HMBSP08397 361 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 SERPINB3P29508 390 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 EML3Q32P44 896 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 FUT11Q495W5 492 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 CARD9Q9H257 536 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 AIPL1Q9NZN9 384 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 UHRF1BP1Q6BDS2 1440 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 CHRNA3P32297 505 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 CRKLP46109 303 aaKnown RBP13.11□□□□□ -0.31
ABCA3-201ENST00000301732 C11orf96Q7Z7L8 435 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 CXorf56Q9H5V9 222 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 USE1Q9NZ43 259 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 DLGAP2Q9P1A6 1054 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 KIF28PB7ZC32 967 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 CCND2P30279 289 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 ANO5Q75V66 913 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 CLEC4FQ8N1N0 589 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 DCPSQ96C86 337 aaKnown RBP13.11□□□□□ -0.31
ABCA3-201ENST00000301732 TRIM11Q96F44 468 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 TUBB6Q9BUF5 446 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 PIF1Q9H611 641 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 TMEM161AQ9NX61 479 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 ERBB3P21860 1342 aa13.11□□□□□ -0.31
ABCA3-201ENST00000301732 NR3C1P04150 777 aa13.1□□□□□ -0.31
ABCA3-201ENST00000301732 PHKG2P15735 406 aa13.1□□□□□ -0.31
ABCA3-201ENST00000301732 CDC27P30260 824 aa13.1□□□□□ -0.31
ABCA3-201ENST00000301732 RGS7P49802 495 aa13.1□□□□□ -0.31
ABCA3-201ENST00000301732 MRPL28Q13084 256 aaKnown RBP13.1□□□□□ -0.31
ABCA3-201ENST00000301732 TXNRD1Q16881 649 aa13.1□□□□□ -0.31
ABCA3-201ENST00000301732 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.1□□□□□ -0.31
ABCA3-201ENST00000301732 ACAP3Q96P50 834 aa13.1□□□□□ -0.31
ABCA3-201ENST00000301732 BABAM1Q9NWV8 329 aa13.1□□□□□ -0.31
ABCA3-201ENST00000301732 TMA7Q9Y2S6 64 aaKnown RBP13.1□□□□□ -0.31
ABCA3-201ENST00000301732 AKR1B1P15121 316 aa13.1□□□□□ -0.31
ABCA3-201ENST00000301732 ANXA13P27216 316 aa13.1□□□□□ -0.31
ABCA3-201ENST00000301732 ALDH1B1P30837 517 aa13.1□□□□□ -0.31
ABCA3-201ENST00000301732 PCSK7Q16549 785 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms