RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 MTF1Q14872 753 aa14.44□□□□□ -0.1
CHRFAM7A-201ENST00000299847 KNOP1Q1ED39 458 aaKnown RBP14.44□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ANKRD40Q6AI12 368 aa14.44□□□□□ -0.1
CHRFAM7A-201ENST00000299847 TUBB6Q9BUF5 446 aa14.44□□□□□ -0.1
CHRFAM7A-201ENST00000299847 BRIP1Q9BX63 1249 aa14.44□□□□□ -0.1
CHRFAM7A-201ENST00000299847 RNF146Q9NTX7 359 aa14.44□□□□□ -0.1
CHRFAM7A-201ENST00000299847 CPDO75976 1380 aa14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 PRPF4O43172 522 aaKnown RBP eCLIP14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 DNAJC6O75061 913 aa14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 DCTN3O75935 186 aa14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 KRT14P02533 472 aa14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 PHKA2P46019 1235 aa14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ATXN3P54252 364 aaPredicted RBP14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 TSPY1Q01534 308 aa14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 RBM41Q96IZ5 413 aaKnown RBP14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 FAM161BQ96MY7 647 aa14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 SPON2Q9BUD6 331 aa14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 CASS4Q9NQ75 786 aa14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 SYNGAP1Q96PV0 1343 aa14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 PRR36Q9H6K5 1346 aa14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ALCAMQ13740 583 aa14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 FAM102AQ5T9C2 384 aaPredicted RBP14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 FOXP4Q8IVH2 680 aaPredicted RBP14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 VPS39Q96JC1 886 aa14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 FAM118BQ9BPY3 351 aa14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 SLC24A3Q9HC58 644 aa14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ERBB3P21860 1342 aa14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 SEC24DO94855 1032 aaPredicted RBP14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 HLA-DPA1P20036 260 aa14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 BLVRAP53004 296 aa14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 PPP1R2P3Q6NXS1 205 aa14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ST13P4Q8IZP2 240 aaPredicted RBP14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 TMEM35BQ8NCS4 154 aa14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 H7C1W4 665 aa14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 PODXLO00592 558 aa14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 IGKV5-2P06315 115 aa14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 CCDC85BQ15834 202 aaPredicted RBP14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ACBD5Q5T8D3 534 aaPredicted RBP14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 WDR75Q8IWA0 830 aaKnown RBP14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 BEST2Q8NFU1 509 aa14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ULK4Q96C45 1275 aa14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 EIF2AK1Q9BQI3 630 aaKnown RBP14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ZCCHC17Q9NP64 241 aaKnown RBP14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 SYF2O95926 243 aaKnown RBP14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 RECQLP46063 649 aaPredicted RBP14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 SPP2Q13103 211 aa14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ELMOD1Q8N336 334 aa14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 SLC30A5Q8TAD4 765 aa14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 EXOC4Q96A65 974 aa14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 YIPF3Q9GZM5 350 aa14.43□□□□□ -0.1
CHRFAM7A-201ENST00000299847 KDM6BO15054 1643 aa14.42□□□□□ -0.1
CHRFAM7A-201ENST00000299847 AP3B2Q13367 1082 aa14.42□□□□□ -0.1
CHRFAM7A-201ENST00000299847 GLYCTKQ8IVS8 523 aa14.42□□□□□ -0.1
CHRFAM7A-201ENST00000299847 RTKN2Q8IZC4 609 aa14.42□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ING2Q9H160 280 aa14.42□□□□□ -0.1
CHRFAM7A-201ENST00000299847 HEATR6Q6AI08 1181 aaKnown RBP14.42□□□□□ -0.1
CHRFAM7A-201ENST00000299847 BZW1Q7L1Q6 419 aaKnown RBP14.42□□□□□ -0.1
CHRFAM7A-201ENST00000299847 EMSYQ7Z589 1322 aa14.42□□□□□ -0.1
CHRFAM7A-201ENST00000299847 AATKQ6ZMQ8 1374 aa14.42□□□□□ -0.1
CHRFAM7A-201ENST00000299847 EFCAB6Q5THR3 1501 aa14.42□□□□□ -0.1
CHRFAM7A-201ENST00000299847 FASTKD1Q53R41 847 aaKnown RBP14.42□□□□□ -0.1
CHRFAM7A-201ENST00000299847 NUDCD3Q8IVD9 361 aa14.42□□□□□ -0.1
CHRFAM7A-201ENST00000299847 TTC8Q8TAM2 541 aa14.42□□□□□ -0.1
CHRFAM7A-201ENST00000299847 CENPKQ9BS16 269 aa14.42□□□□□ -0.1
CHRFAM7A-201ENST00000299847 TMEM60Q9H2L4 133 aa14.42□□□□□ -0.1
CHRFAM7A-201ENST00000299847 A8MXQ7 604 aa14.42□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ZSCAN9O15535 394 aaPredicted RBP14.42□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ASNSP08243 561 aa14.42□□□□□ -0.1
CHRFAM7A-201ENST00000299847 HMBSP08397 361 aa14.42□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ABCD1P33897 745 aa14.42□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ALDH18A1P54886 795 aaKnown RBP14.42□□□□□ -0.1
CHRFAM7A-201ENST00000299847 SLC10A5Q5PT55 438 aa14.42□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ZNF513Q8N8E2 541 aaPredicted RBP14.42□□□□□ -0.1
CHRFAM7A-201ENST00000299847 USP33Q8TEY7 942 aa14.42□□□□□ -0.1
CHRFAM7A-201ENST00000299847 KIF12Q96FN5 646 aa14.42□□□□□ -0.1
CHRFAM7A-201ENST00000299847 CYP26A1O43174 497 aa14.42□□□□□ -0.1
CHRFAM7A-201ENST00000299847 NMT1P30419 496 aaKnown RBP14.42□□□□□ -0.1
CHRFAM7A-201ENST00000299847 C16orf87Q6PH81 154 aa14.42□□□□□ -0.1
CHRFAM7A-201ENST00000299847 NRBF2Q96F24 287 aa14.42□□□□□ -0.1
CHRFAM7A-201ENST00000299847 TRPC7Q9HCX4 862 aa14.42□□□□□ -0.1
CHRFAM7A-201ENST00000299847 CD209Q9NNX6 404 aa14.42□□□□□ -0.1
CHRFAM7A-201ENST00000299847 DCP1AQ9NPI6 582 aaPredicted RBP14.42□□□□□ -0.1
CHRFAM7A-201ENST00000299847 IPO5O00410 1097 aaKnown RBP14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 SDC4P31431 198 aa14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 AGAP3Q96P47 875 aa14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 TEKT2Q9UIF3 430 aa14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 MID2Q9UJV3 735 aa14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 KDM5CP41229 1560 aa14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 NPHP4O75161 1426 aaPredicted RBP14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 MYBP10242 640 aa14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 PPARGP37231 505 aaPredicted RBP14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 MTM1Q13496 603 aa14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 FLOT2Q14254 428 aa14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 COBLL1Q53SF7 1204 aa14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 LRRC8EQ6NSJ5 796 aa14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 CC2D1AQ6P1N0 951 aaPredicted RBP14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 CCDC137Q6PK04 289 aaKnown RBP14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 CPA5Q8WXQ8 436 aa14.41□□□□□ -0.1
CHRFAM7A-201ENST00000299847 BTBD6Q96KE9 485 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms