RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 SYT11Q9BT88 431 aa14.79□□□□□ -0.04
CHMP4C-201ENST00000297265 TSGA10Q9BZW7 698 aa14.79□□□□□ -0.04
CHMP4C-201ENST00000297265 HAPLN2Q9GZV7 340 aa14.79□□□□□ -0.04
CHMP4C-201ENST00000297265 TMEM117Q9H0C3 514 aa14.79□□□□□ -0.04
CHMP4C-201ENST00000297265 HDAC6Q9UBN7 1215 aa14.79□□□□□ -0.04
CHMP4C-201ENST00000297265 APEX2Q9UBZ4 518 aa14.79□□□□□ -0.04
CHMP4C-201ENST00000297265 DNAJC12Q9UKB3 198 aa14.79□□□□□ -0.04
CHMP4C-201ENST00000297265 F8VZ95 297 aa14.78□□□□□ -0.04
CHMP4C-201ENST00000297265 P4HA2O15460 535 aa14.78□□□□□ -0.04
CHMP4C-201ENST00000297265 MAFO75444 373 aaPredicted RBP14.78□□□□□ -0.04
CHMP4C-201ENST00000297265 KRT13P13646 458 aa14.78□□□□□ -0.04
CHMP4C-201ENST00000297265 MKRN4PQ13434 485 aaPredicted RBP14.78□□□□□ -0.04
CHMP4C-201ENST00000297265 DRAP1Q14919 205 aaPredicted RBP14.78□□□□□ -0.04
CHMP4C-201ENST00000297265 CST9Q5W186 159 aa14.78□□□□□ -0.04
CHMP4C-201ENST00000297265 TAPT1Q6NXT6 567 aa14.78□□□□□ -0.04
CHMP4C-201ENST00000297265 ANKRD23Q86SG2 305 aa14.78□□□□□ -0.04
CHMP4C-201ENST00000297265 TRIM50Q86XT4 487 aa14.78□□□□□ -0.04
CHMP4C-201ENST00000297265 GTF3C2Q8WUA4 911 aaPredicted RBP14.78□□□□□ -0.04
CHMP4C-201ENST00000297265 IFT74Q96LB3 600 aa14.78□□□□□ -0.04
CHMP4C-201ENST00000297265 POP1Q99575 1024 aaKnown RBP14.78□□□□□ -0.04
CHMP4C-201ENST00000297265 PACSIN1Q9BY11 444 aa14.78□□□□□ -0.04
CHMP4C-201ENST00000297265 NRBP2Q9NSY0 501 aa14.78□□□□□ -0.04
CHMP4C-201ENST00000297265 MORF4L1Q9UBU8 362 aa14.78□□□□□ -0.04
CHMP4C-201ENST00000297265 BZW2Q9Y6E2 419 aaKnown RBP14.78□□□□□ -0.04
CHMP4C-201ENST00000297265 STYXL1Q9Y6J8 313 aa14.78□□□□□ -0.04
CHMP4C-201ENST00000297265 PLXNB2O15031 1838 aa14.78□□□□□ -0.04
CHMP4C-201ENST00000297265 NAMPTP43490 491 aa14.78□□□□□ -0.04
CHMP4C-201ENST00000297265 TUBB2AQ13885 445 aa14.78□□□□□ -0.04
CHMP4C-201ENST00000297265 SPRYD7Q5W111 196 aa14.78□□□□□ -0.04
CHMP4C-201ENST00000297265 ARMCX2Q7L311 632 aa14.78□□□□□ -0.04
CHMP4C-201ENST00000297265 SECISBP2LQ93073 1101 aaKnown RBP14.78□□□□□ -0.04
CHMP4C-201ENST00000297265 MPHOSPH6Q99547 160 aaKnown RBP14.78□□□□□ -0.04
CHMP4C-201ENST00000297265 TUBB2BQ9BVA1 445 aa14.78□□□□□ -0.04
CHMP4C-201ENST00000297265 KATNBL1Q9H079 304 aa14.78□□□□□ -0.04
CHMP4C-201ENST00000297265 PCNTO95613 3336 aa14.77□□□□□ -0.04
CHMP4C-201ENST00000297265 IGKV6-21A0A0C4DH24 114 aa14.77□□□□□ -0.05
CHMP4C-201ENST00000297265 LRRIQ3A6PVS8 624 aaPredicted RBP14.77□□□□□ -0.05
CHMP4C-201ENST00000297265 EVI5O60447 810 aa14.77□□□□□ -0.05
CHMP4C-201ENST00000297265 MOCS3O95396 460 aa14.77□□□□□ -0.05
CHMP4C-201ENST00000297265 GARTP22102 1010 aa14.77□□□□□ -0.05
CHMP4C-201ENST00000297265 ADORA2AP29274 412 aa14.77□□□□□ -0.05
CHMP4C-201ENST00000297265 SOX5P35711 763 aa14.77□□□□□ -0.05
CHMP4C-201ENST00000297265 RFC5P40937 340 aa14.77□□□□□ -0.05
CHMP4C-201ENST00000297265 FAM160B1Q5W0V3 765 aa14.77□□□□□ -0.05
CHMP4C-201ENST00000297265 PLPPR4Q7Z2D5 763 aa14.77□□□□□ -0.05
CHMP4C-201ENST00000297265 ARHGEF19Q8IW93 802 aa14.77□□□□□ -0.05
CHMP4C-201ENST00000297265 MNS1Q8NEH6 495 aa14.77□□□□□ -0.05
CHMP4C-201ENST00000297265 SLC30A5Q8TAD4 765 aa14.77□□□□□ -0.05
CHMP4C-201ENST00000297265 SLC7A3Q8WY07 619 aa14.77□□□□□ -0.05
CHMP4C-201ENST00000297265 EPC1Q9H2F5 836 aa14.77□□□□□ -0.05
CHMP4C-201ENST00000297265 DIS3Q9Y2L1 958 aaKnown RBP14.77□□□□□ -0.05
CHMP4C-201ENST00000297265 COQ4Q9Y3A0 265 aa14.77□□□□□ -0.05
CHMP4C-201ENST00000297265 DDX3XO00571 662 aaKnown RBP eCLIP14.76□□□□□ -0.052e-9■■■■□ 25.2
CHMP4C-201ENST00000297265 HNRNPDLO14979 420 aaKnown RBP14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 GFPT2O94808 682 aa14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 CELF2O95319 508 aaKnown RBP14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 PIGRP01833 764 aa14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 TXNP10599 105 aaKnown RBP14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 ZSCAN20P17040 1043 aaPredicted RBP14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 KLRC1P26715 233 aa14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 SRGAP1Q7Z6B7 1085 aa14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 DNAAF5Q86Y56 855 aa14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 DHX37Q8IY37 1157 aaKnown RBP14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 BBXQ8WY36 941 aaPredicted RBP14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 POMGNT1Q8WZA1 660 aa14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 SEMA4DQ92854 862 aa14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 SPATA33Q96N06 139 aa14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 KCNG1Q9UIX4 513 aa14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 NAGPAQ9UK23 515 aa14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 ASB14A6NK59 587 aa14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 FOXN3O00409 490 aaPredicted RBP14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 SRGAP2O75044 1071 aa14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 MARK3P27448 753 aa14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 STAT1P42224 750 aa14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 WNT7BP56706 349 aa14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 CYP24A1Q07973 514 aa14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 CAPSQ13938 189 aa14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 PLCB4Q15147 1175 aa14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 NAB2Q15742 525 aa14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 GJC2Q5T442 439 aaPredicted RBP14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 CRELD2Q6UXH1 353 aaPredicted RBP14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 GPD1LQ8N335 351 aa14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 TRIM58Q8NG06 486 aa14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 TMC2Q8TDI7 906 aa14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 UBXN4Q92575 508 aa14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 ZBTB45Q96K62 511 aaPredicted RBP14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 TOPORSQ9NS56 1045 aaPredicted RBP14.76□□□□□ -0.05
CHMP4C-201ENST00000297265 RBM47A0AV96 593 aaKnown RBP14.75□□□□□ -0.05
CHMP4C-201ENST00000297265 ANO9A1A5B4 782 aa14.75□□□□□ -0.05
CHMP4C-201ENST00000297265 TTLL13PA6NNM8 815 aa14.75□□□□□ -0.05
CHMP4C-201ENST00000297265 H0YCG3 227 aa14.75□□□□□ -0.05
CHMP4C-201ENST00000297265 N4BP1O75113 896 aaKnown RBP14.75□□□□□ -0.05
CHMP4C-201ENST00000297265 SNAI1O95863 264 aaPredicted RBP14.75□□□□□ -0.05
CHMP4C-201ENST00000297265 ZBTB48P10074 688 aaPredicted RBP14.75□□□□□ -0.05
CHMP4C-201ENST00000297265 H2AFXP16104 143 aaPredicted RBP14.75□□□□□ -0.05
CHMP4C-201ENST00000297265 FERP16591 822 aa14.75□□□□□ -0.05
CHMP4C-201ENST00000297265 GCLCP48506 637 aaPredicted RBP14.75□□□□□ -0.05
CHMP4C-201ENST00000297265 CLDN10P78369 228 aa14.75□□□□□ -0.05
CHMP4C-201ENST00000297265 CCNA1P78396 465 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms