RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 XKR9Q5GH70 373 aa10.07□□□□□ -0.8
UBLCP1-201ENST00000296786 FAM102BQ5T8I3 360 aa10.07□□□□□ -0.8
UBLCP1-201ENST00000296786 DCAF12L1Q5VU92 463 aa10.07□□□□□ -0.8
UBLCP1-201ENST00000296786 NSMFQ6X4W1 530 aa10.07□□□□□ -0.8
UBLCP1-201ENST00000296786 DDX42Q86XP3 938 aaKnown RBP eCLIP10.07□□□□□ -0.8
UBLCP1-201ENST00000296786 WNK4Q96J92 1243 aa10.07□□□□□ -0.8
UBLCP1-201ENST00000296786 AMACRQ9UHK6 382 aa10.07□□□□□ -0.8
UBLCP1-201ENST00000296786 COG5Q9UP83 839 aa10.07□□□□□ -0.8
UBLCP1-201ENST00000296786 GOLGA8IPA6NC78 632 aa10.06□□□□□ -0.8
UBLCP1-201ENST00000296786 GOLGA8JA6NMD2 632 aa10.06□□□□□ -0.8
UBLCP1-201ENST00000296786 BHMG1C9JSJ3 638 aaPredicted RBP10.06□□□□□ -0.8
UBLCP1-201ENST00000296786 MAPK13O15264 365 aa10.06□□□□□ -0.8
UBLCP1-201ENST00000296786 DDX3YO15523 660 aaKnown RBP10.06□□□□□ -0.8
UBLCP1-201ENST00000296786 FGGP02679 453 aa10.06□□□□□ -0.8
UBLCP1-201ENST00000296786 ADRB2P07550 413 aa10.06□□□□□ -0.8
UBLCP1-201ENST00000296786 MXI1P50539 228 aa10.06□□□□□ -0.8
UBLCP1-201ENST00000296786 JAK3P52333 1124 aa10.06□□□□□ -0.8
UBLCP1-201ENST00000296786 CUL1Q13616 776 aa10.06□□□□□ -0.8
UBLCP1-201ENST00000296786 DNAJC21Q5F1R6 531 aaKnown RBP10.06□□□□□ -0.8
UBLCP1-201ENST00000296786 ARHGEF16Q5VV41 709 aa10.06□□□□□ -0.8
UBLCP1-201ENST00000296786 KCTD16Q68DU8 428 aa10.06□□□□□ -0.8
UBLCP1-201ENST00000296786 SAMD3Q8N6K7 520 aa10.06□□□□□ -0.8
UBLCP1-201ENST00000296786 EIF1ADQ8N9N8 165 aaKnown RBP10.06□□□□□ -0.8
UBLCP1-201ENST00000296786 JDP2Q8WYK2 163 aa10.06□□□□□ -0.8
UBLCP1-201ENST00000296786 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.06□□□□□ -0.8
UBLCP1-201ENST00000296786 TIPINQ9BVW5 301 aa10.06□□□□□ -0.8
UBLCP1-201ENST00000296786 TMEM117Q9H0C3 514 aa10.06□□□□□ -0.8
UBLCP1-201ENST00000296786 ZBED4O75132 1171 aa10.06□□□□□ -0.8
UBLCP1-201ENST00000296786 SFNP31947 248 aa10.06□□□□□ -0.8
UBLCP1-201ENST00000296786 HSPA9P38646 679 aaKnown RBP10.06□□□□□ -0.8
UBLCP1-201ENST00000296786 KRT76Q01546 638 aa10.06□□□□□ -0.8
UBLCP1-201ENST00000296786 SH2D3CQ8N5H7 860 aa10.06□□□□□ -0.8
UBLCP1-201ENST00000296786 KAT5Q92993 513 aa10.06□□□□□ -0.8
UBLCP1-201ENST00000296786 KIFC3Q9BVG8 833 aa10.06□□□□□ -0.8
UBLCP1-201ENST00000296786 CAPS2Q9BXY5 557 aa10.06□□□□□ -0.8
UBLCP1-201ENST00000296786 NEUROG2Q9H2A3 272 aa10.06□□□□□ -0.8
UBLCP1-201ENST00000296786 SLITRK6Q9H5Y7 841 aa10.06□□□□□ -0.8
UBLCP1-201ENST00000296786 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.06□□□□□ -0.8
UBLCP1-201ENST00000296786 TTC7AQ9ULT0 858 aaPredicted RBP10.06□□□□□ -0.8
UBLCP1-201ENST00000296786 RIPK3Q9Y572 518 aa10.06□□□□□ -0.8
UBLCP1-201ENST00000296786 CCDC169A6NNP5 214 aa10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 ANKRD63C9JTQ0 380 aa10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 TULP1O00294 542 aaPredicted RBP10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 VWA5AO00534 786 aa10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 TTI1O43156 1089 aa10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 PPFIA4O75335 1185 aa10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 FTLP02792 175 aaPredicted RBP10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 ADSSP30520 456 aa10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 USP8P40818 1118 aa10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 IRAK1P51617 712 aa10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 SNRPFP62306 86 aaKnown RBP10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 MAP2K1Q02750 393 aaPredicted RBP10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 PRPF4BQ13523 1007 aaKnown RBP10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 SNRNP35Q16560 246 aaKnown RBP10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 NAA35Q5VZE5 725 aa10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 ZNF746Q6NUN9 644 aaPredicted RBP10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 ANO5Q75V66 913 aa10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 CBWD2Q8IUF1 395 aa10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 CD302Q8IX05 232 aa10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 RHOT2Q8IXI1 618 aa10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 RPUSD2Q8IZ73 545 aaKnown RBP10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 TMEM161BQ8NDZ6 487 aa10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 VTI1AQ96AJ9 217 aa10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 ATG4CQ96DT6 458 aa10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 SAAL1Q96ER3 474 aa10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 RNPC3Q96LT9 517 aaKnown RBP10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 IWS1Q96ST2 819 aa10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 CELF4Q9BZC1 486 aaKnown RBP10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 CARD9Q9H257 536 aa10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 TAOK3Q9H2K8 898 aa10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 ANKEF1Q9NU02 776 aa10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 PIM2Q9P1W9 311 aa10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 LCMT1Q9UIC8 334 aa10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 TBX20Q9UMR3 447 aa10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 LOC285556D6RIA3 1793 aa10.05□□□□□ -0.8
UBLCP1-201ENST00000296786 TULP2O00295 520 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 NPTX2P47972 431 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 SMTNP53814 917 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 ZNF280AP59817 542 aaPredicted RBP10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 DMP1Q13316 513 aaPredicted RBP10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 BAATQ14032 418 aaPredicted RBP10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 SAMD7Q7Z3H4 446 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 MAATS1Q7Z4T9 603 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 SRLQ86TD4 932 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 PPM1KQ8N3J5 372 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 SLC17A8Q8NDX2 589 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 CCDC26Q8TAB7 109 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 EPS8L1Q8TE68 723 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 RNF146Q9NTX7 359 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 GINM1Q9NU53 330 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 CTTNBP2NLQ9P2B4 639 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 RSPH14Q9UHP6 348 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 PLAAQ9Y263 795 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 DIS3Q9Y2L1 958 aaKnown RBP10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 NR2E1Q9Y466 385 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 SIP14410 1827 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 WDR90Q96KV7 1748 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 GRIN2DO15399 1336 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 DENND3A2RUS2 1198 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 PMM2O15305 246 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms