RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 RAD51CO43502 376 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 PAMP19021 973 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 SLC12A1Q13621 1099 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 TMEM259Q4ZIN3 620 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 HP1BP3Q5SSJ5 553 aaPredicted RBP11.72□□□□□ -0.53
PBRM1-201ENST00000296302 CYB5D1Q6P9G0 228 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 SCG3Q8WXD2 468 aaKnown RBP11.72□□□□□ -0.53
PBRM1-201ENST00000296302 AGPAT1Q99943 283 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 NOD2Q9HC29 1040 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 GGT7Q9UJ14 662 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 FAM47DPA6NHR8 397 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 SYCE1LA8MT33 242 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 GSG1L2A8MUP6 293 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 SLC16A3O15427 465 aaKnown RBP11.72□□□□□ -0.53
PBRM1-201ENST00000296302 RTN2O75298 545 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 TBXAS1P24557 533 aaPredicted RBP11.72□□□□□ -0.53
PBRM1-201ENST00000296302 MARK3P27448 753 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 JAK3P52333 1124 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 PDIA5Q14554 519 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 TMTC4Q5T4D3 741 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.72□□□□□ -0.53
PBRM1-201ENST00000296302 ZBTB18Q99592 522 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 C7orf25Q9BPX7 421 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 CYP4F11Q9HBI6 524 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 WDR17Q8IZU2 1322 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 CCDC195A0A1B0GUA6 201 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 ARHGDIAP52565 204 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 MTERF2Q49AM1 385 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 DAB2IPQ5VWQ8 1189 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 RBM43Q6ZSC3 357 aaKnown RBP11.72□□□□□ -0.53
PBRM1-201ENST00000296302 ERP27Q96DN0 273 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 PNKPQ96T60 521 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 TRIM51Q9BSJ1 452 aa11.72□□□□□ -0.53
PBRM1-201ENST00000296302 BBOX1O75936 387 aa11.71□□□□□ -0.53
PBRM1-201ENST00000296302 MAPRE2Q15555 327 aa11.71□□□□□ -0.53
PBRM1-201ENST00000296302 HIF1AQ16665 826 aa11.71□□□□□ -0.53
PBRM1-201ENST00000296302 ERFEQ4G0M1 354 aa11.71□□□□□ -0.53
PBRM1-201ENST00000296302 ZNF667Q5HYK9 610 aa11.71□□□□□ -0.53
PBRM1-201ENST00000296302 PADI6Q6TGC4 694 aa11.71□□□□□ -0.53
PBRM1-201ENST00000296302 USP38Q8NB14 1042 aa11.71□□□□□ -0.53
PBRM1-201ENST00000296302 MCPH1Q8NEM0 835 aa11.71□□□□□ -0.53
PBRM1-201ENST00000296302 SCHIP1Q9P0W5 487 aaPredicted RBP11.71□□□□□ -0.53
PBRM1-201ENST00000296302 MAGED2Q9UNF1 606 aaPredicted RBP11.71□□□□□ -0.53
PBRM1-201ENST00000296302 ZNF711Q9Y462 761 aa11.71□□□□□ -0.53
PBRM1-201ENST00000296302 PNPLA7Q6ZV29 1317 aa11.71□□□□□ -0.53
PBRM1-201ENST00000296302 ORC4O43929 436 aa11.71□□□□□ -0.53
PBRM1-201ENST00000296302 DNAJC6O75061 913 aa11.71□□□□□ -0.53
PBRM1-201ENST00000296302 KIF22Q14807 665 aa11.71□□□□□ -0.53
PBRM1-201ENST00000296302 EFTUD2Q15029 972 aaKnown RBP eCLIP11.71□□□□□ -0.53
PBRM1-201ENST00000296302 NAB2Q15742 525 aa11.71□□□□□ -0.53
PBRM1-201ENST00000296302 ZNF746Q6NUN9 644 aaPredicted RBP11.71□□□□□ -0.53
PBRM1-201ENST00000296302 C7orf31Q8N865 590 aa11.71□□□□□ -0.53
PBRM1-201ENST00000296302 DDX17Q92841 729 aaKnown RBP11.71□□□□□ -0.53
PBRM1-201ENST00000296302 PHF20Q9BVI0 1012 aa11.71□□□□□ -0.53
PBRM1-201ENST00000296302 ADA2Q9NZK5 511 aa11.71□□□□□ -0.53
PBRM1-201ENST00000296302 USP17L5A8MUK1 530 aa11.71□□□□□ -0.54
PBRM1-201ENST00000296302 HOXA13P31271 388 aaPredicted RBP11.71□□□□□ -0.54
PBRM1-201ENST00000296302 PAPOLAP51003 745 aaKnown RBP11.71□□□□□ -0.54
PBRM1-201ENST00000296302 ARL13BQ3SXY8 428 aa11.71□□□□□ -0.54
PBRM1-201ENST00000296302 CC2D2BQ6DHV5 1058 aa11.71□□□□□ -0.54
PBRM1-201ENST00000296302 SCARA5Q6ZMJ2 495 aa11.71□□□□□ -0.54
PBRM1-201ENST00000296302 SIX6OS1Q8N1H7 587 aa11.71□□□□□ -0.54
PBRM1-201ENST00000296302 RNF169Q8NCN4 708 aa11.71□□□□□ -0.54
PBRM1-201ENST00000296302 FAM129AQ9BZQ8 928 aa11.71□□□□□ -0.54
PBRM1-201ENST00000296302 UVRAGQ9P2Y5 699 aa11.71□□□□□ -0.54
PBRM1-201ENST00000296302 PDS5AQ29RF7 1337 aaKnown RBP11.71□□□□□ -0.54
PBRM1-201ENST00000296302 CDHR2Q9BYE9 1310 aa11.71□□□□□ -0.54
PBRM1-201ENST00000296302 IGBP1P78318 339 aa11.71□□□□□ -0.54
PBRM1-201ENST00000296302 CNGA3Q16281 694 aa11.71□□□□□ -0.54
PBRM1-201ENST00000296302 TMEM270Q6UE05 265 aa11.71□□□□□ -0.54
PBRM1-201ENST00000296302 RSRC2Q7L4I2 434 aaKnown RBP11.71□□□□□ -0.54
PBRM1-201ENST00000296302 OR2W6PQ8NHA6 318 aa11.71□□□□□ -0.54
PBRM1-201ENST00000296302 SKA2Q8WVK7 121 aaPredicted RBP11.71□□□□□ -0.54
PBRM1-201ENST00000296302 PAGR1Q9BTK6 254 aa11.71□□□□□ -0.54
PBRM1-201ENST00000296302 RPF1Q9H9Y2 349 aaKnown RBP11.71□□□□□ -0.54
PBRM1-201ENST00000296302 NLRP1Q9C000 1473 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 ROBO2Q9HCK4 1378 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 GDF11O95390 407 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 GUCY1A2P33402 732 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 ARSEP51690 589 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 CDO1Q16878 200 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 PPP6R3Q5H9R7 873 aaPredicted RBP11.7□□□□□ -0.54
PBRM1-201ENST00000296302 ARMCX2Q7L311 632 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 TRAPPC11Q7Z392 1133 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 ZBTB33Q86T24 672 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 FOXP4Q8IVH2 680 aaPredicted RBP11.7□□□□□ -0.54
PBRM1-201ENST00000296302 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.7□□□□□ -0.54
PBRM1-201ENST00000296302 DTX3LQ8TDB6 740 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 TSSK1BQ9BXA7 367 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 DCP1AQ9NPI6 582 aaPredicted RBP11.7□□□□□ -0.54
PBRM1-201ENST00000296302 SLC5A4Q9NY91 659 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 PAIP2BQ9ULR5 123 aaKnown RBP11.7□□□□□ -0.54
PBRM1-201ENST00000296302 hCG_2014768A0A024R1R8 64 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 E2F6O75461 281 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 CYP2D6P10635 497 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 TAP1Q03518 808 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 YWHAHQ04917 246 aaPredicted RBP11.7□□□□□ -0.54
PBRM1-201ENST00000296302 RIBC1Q8N443 379 aaPredicted RBP11.7□□□□□ -0.54
PBRM1-201ENST00000296302 MYCBPAPQ8TBZ2 947 aa11.7□□□□□ -0.54
PBRM1-201ENST00000296302 STK33Q9BYT3 514 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms