RNA–Protein interactions for RNA: ENST00000296088.11

SNRK-201, Transcript of SNF related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRK, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRK-201ENST00000296088 NSUN7Q8NE18 718 aaKnown RBP13.18□□□□□ -0.3
SNRK-201ENST00000296088 PIK3R5Q8WYR1 880 aa13.18□□□□□ -0.3
SNRK-201ENST00000296088 MRPL48Q96GC5 212 aaKnown RBP13.18□□□□□ -0.3
SNRK-201ENST00000296088 HEXIM2Q96MH2 286 aaKnown RBP13.18□□□□□ -0.3
SNRK-201ENST00000296088 CLEC4MQ9H2X3 399 aaPredicted RBP13.18□□□□□ -0.3
SNRK-201ENST00000296088 RPF1Q9H9Y2 349 aaKnown RBP13.18□□□□□ -0.3
SNRK-201ENST00000296088 HACD3Q9P035 362 aa13.18□□□□□ -0.3
SNRK-201ENST00000296088 SLC1A1P43005 524 aa13.18□□□□□ -0.3
SNRK-201ENST00000296088 POLA2Q14181 598 aa13.18□□□□□ -0.3
SNRK-201ENST00000296088 KBTBD12Q3ZCT8 623 aa13.18□□□□□ -0.3
SNRK-201ENST00000296088 ZNF667Q5HYK9 610 aa13.18□□□□□ -0.3
SNRK-201ENST00000296088 HEATR6Q6AI08 1181 aaKnown RBP13.18□□□□□ -0.3
SNRK-201ENST00000296088 ARHGEF11O15085 1522 aa13.18□□□□□ -0.3
SNRK-201ENST00000296088 ABCC4O15439 1325 aa13.18□□□□□ -0.3
SNRK-201ENST00000296088 PVALEFA0A1B0GWK0 134 aa13.18□□□□□ -0.3
SNRK-201ENST00000296088 INO80B-WBP1J3KQ70 363 aa13.18□□□□□ -0.3
SNRK-201ENST00000296088 PRPF3O43395 683 aaKnown RBP13.18□□□□□ -0.3
SNRK-201ENST00000296088 KCNQ4P56696 695 aa13.18□□□□□ -0.3
SNRK-201ENST00000296088 MTFR1Q15390 333 aa13.18□□□□□ -0.3
SNRK-201ENST00000296088 TRIP4Q15650 581 aaPredicted RBP13.18□□□□□ -0.3
SNRK-201ENST00000296088 LARGE2Q8N3Y3 721 aa13.18□□□□□ -0.3
SNRK-201ENST00000296088 ZNF473Q8WTR7 871 aaKnown RBP13.18□□□□□ -0.3
SNRK-201ENST00000296088 AGBL1Q96MI9 1066 aa13.18□□□□□ -0.3
SNRK-201ENST00000296088 INO80BQ9C086 356 aaPredicted RBP13.18□□□□□ -0.3
SNRK-201ENST00000296088 PAPOLBQ9NRJ5 636 aaKnown RBP13.18□□□□□ -0.3
SNRK-201ENST00000296088 GEMIN8Q9NWZ8 242 aaKnown RBP13.18□□□□□ -0.3
SNRK-201ENST00000296088 TMEM161AQ9NX61 479 aa13.18□□□□□ -0.3
SNRK-201ENST00000296088 THRAP3Q9Y2W1 955 aaKnown RBP13.18□□□□□ -0.3
SNRK-201ENST00000296088 UNC13DQ70J99 1090 aa13.18□□□□□ -0.3
SNRK-201ENST00000296088 LONP2Q86WA8 852 aa13.18□□□□□ -0.3
SNRK-201ENST00000296088 QKIQ96PU8 341 aaKnown RBP eCLIP13.18□□□□□ -0.39e-7■■□□□ 14.3
SNRK-201ENST00000296088 SAMSN1Q9NSI8 373 aaKnown RBP13.18□□□□□ -0.3
SNRK-201ENST00000296088 ATP10DQ9P241 1426 aa13.18□□□□□ -0.3
SNRK-201ENST00000296088 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.17□□□□□ -0.3
SNRK-201ENST00000296088 FGAP02671 866 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 CYP27A1Q02318 531 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 FAM45BPQ6NSW5 357 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 IKBIPQ70UQ0 350 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 APPL2Q8NEU8 664 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 PAGE5Q96GU1 130 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 ZFP42Q96MM3 310 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 TSSK1BQ9BXA7 367 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.17□□□□□ -0.3
SNRK-201ENST00000296088 PNMA6EA0A0J9YXQ4 647 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 H0YIN7 160 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 CYP4A11Q02928 519 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 MXD4Q14582 209 aaPredicted RBP13.17□□□□□ -0.3
SNRK-201ENST00000296088 RTL3Q8N8U3 475 aaKnown RBP13.17□□□□□ -0.3
SNRK-201ENST00000296088 KRT35Q92764 455 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 VPS50Q96JG6 964 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 EGFL8Q99944 293 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 CCDC87Q9NVE4 849 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 COL17A1Q9UMD9 1497 aaPredicted RBP13.17□□□□□ -0.3
SNRK-201ENST00000296088 TRIM24O15164 1050 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 PLA2G4BP0C869 781 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 TRIM49P0CI25 452 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 TRIM49CP0CI26 452 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 ATXN3P54252 364 aaPredicted RBP13.17□□□□□ -0.3
SNRK-201ENST00000296088 TRIP10Q15642 601 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 G2E3Q7L622 706 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 GPR141Q7Z602 305 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 NIM1KQ8IY84 436 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 IL17RAQ96F46 866 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 PDLIM2Q96JY6 352 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 BBS2Q9BXC9 721 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 SPATA31E1Q6ZUB1 1445 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 PRR23AA6NEV1 266 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 MTRF1O75570 445 aaKnown RBP13.17□□□□□ -0.3
SNRK-201ENST00000296088 DLGAP3O95886 979 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 PSAPP07602 524 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 KITP10721 976 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 AP3M2P53677 418 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 ROR1Q01973 937 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 PDIA2Q13087 525 aaKnown RBP13.17□□□□□ -0.3
SNRK-201ENST00000296088 PASD1Q8IV76 773 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 CEP170P1Q96L14 293 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 FOPNLQ96NB1 174 aa13.17□□□□□ -0.3
SNRK-201ENST00000296088 A0A1W2PQC6 194 aa13.16□□□□□ -0.3
SNRK-201ENST00000296088 ARIH2O95376 493 aa13.16□□□□□ -0.3
SNRK-201ENST00000296088 ALBP02768 609 aa13.16□□□□□ -0.3
SNRK-201ENST00000296088 KCTD2Q14681 263 aa13.16□□□□□ -0.3
SNRK-201ENST00000296088 RNF219Q5W0B1 726 aaPredicted RBP13.16□□□□□ -0.3
SNRK-201ENST00000296088 DDIASQ8IXT1 998 aa13.16□□□□□ -0.3
SNRK-201ENST00000296088 PI4K2BQ8TCG2 481 aa13.16□□□□□ -0.3
SNRK-201ENST00000296088 EXOSC4Q9NPD3 245 aaKnown RBP13.16□□□□□ -0.3
SNRK-201ENST00000296088 NGRNQ9NPE2 291 aaKnown RBP13.16□□□□□ -0.3
SNRK-201ENST00000296088 JAG2Q9Y219 1238 aa13.16□□□□□ -0.3
SNRK-201ENST00000296088 CD109Q6YHK3 1445 aa13.16□□□□□ -0.3
SNRK-201ENST00000296088 A0A0D9SFI3 127 aa13.16□□□□□ -0.3
SNRK-201ENST00000296088 PRAMEP78395 509 aa13.16□□□□□ -0.3
SNRK-201ENST00000296088 KRT24Q2M2I5 525 aa13.16□□□□□ -0.3
SNRK-201ENST00000296088 C4orf22Q6V702 233 aa13.16□□□□□ -0.3
SNRK-201ENST00000296088 ZBTB38Q8NAP3 1195 aaPredicted RBP13.16□□□□□ -0.3
SNRK-201ENST00000296088 MTERF3Q96E29 417 aa13.16□□□□□ -0.3
SNRK-201ENST00000296088 OMA1Q96E52 524 aa13.16□□□□□ -0.3
SNRK-201ENST00000296088 CCT8L2Q96SF2 557 aa13.16□□□□□ -0.3
SNRK-201ENST00000296088 TRABDQ9H4I3 376 aa13.16□□□□□ -0.3
SNRK-201ENST00000296088 MAD2L2Q9UI95 211 aa13.16□□□□□ -0.3
SNRK-201ENST00000296088 DNAJC12Q9UKB3 198 aa13.16□□□□□ -0.3
SNRK-201ENST00000296088 ADGRA3Q8IWK6 1321 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms