RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 AGPAT5Q9NUQ2 364 aa24.86■■□□□ 1.57
LINC01116-201ENST00000295549 EXOC1Q9NV70 894 aa24.86■■□□□ 1.57
LINC01116-201ENST00000295549 TBC1D7Q9P0N9 293 aa24.86■■□□□ 1.57
LINC01116-201ENST00000295549 PCDHB13Q9Y5F0 798 aa24.86■■□□□ 1.57
LINC01116-201ENST00000295549 PCDHA5Q9Y5H7 936 aa24.86■■□□□ 1.57
LINC01116-201ENST00000295549 PPP1R37O75864 691 aa24.86■■□□□ 1.57
LINC01116-201ENST00000295549 RHOBTB3O94955 611 aa24.86■■□□□ 1.57
LINC01116-201ENST00000295549 FGBP02675 491 aa24.86■■□□□ 1.57
LINC01116-201ENST00000295549 ACTN1P12814 892 aa24.86■■□□□ 1.57
LINC01116-201ENST00000295549 HOXA11P31270 313 aaPredicted RBP24.86■■□□□ 1.57
LINC01116-201ENST00000295549 ALCAMQ13740 583 aa24.86■■□□□ 1.57
LINC01116-201ENST00000295549 IKBKEQ14164 716 aa24.86■■□□□ 1.57
LINC01116-201ENST00000295549 TCTN1Q2MV58 587 aa24.86■■□□□ 1.57
LINC01116-201ENST00000295549 NT5DC1Q5TFE4 455 aa24.86■■□□□ 1.57
LINC01116-201ENST00000295549 ZNF365Q70YC5 407 aa24.86■■□□□ 1.57
LINC01116-201ENST00000295549 TET1Q8NFU7 2136 aa24.86■■□□□ 1.57
LINC01116-201ENST00000295549 TBX20Q9UMR3 447 aa24.86■■□□□ 1.57
LINC01116-201ENST00000295549 SCN5AQ14524 2016 aa24.86■■□□□ 1.57
LINC01116-201ENST00000295549 ABHD14A-ACY1A0A1B0GW23 586 aa24.85■■□□□ 1.57
LINC01116-201ENST00000295549 RBAK-RBAKDNI3L0D1 243 aa24.85■■□□□ 1.57
LINC01116-201ENST00000295549 EFCAB14O75071 495 aa24.85■■□□□ 1.57
LINC01116-201ENST00000295549 BAIAP3O94812 1187 aa24.85■■□□□ 1.57
LINC01116-201ENST00000295549 SARSP49591 514 aaKnown RBP24.85■■□□□ 1.57
LINC01116-201ENST00000295549 STRN3Q13033 797 aa24.85■■□□□ 1.57
LINC01116-201ENST00000295549 DSC3Q14574 896 aa24.85■■□□□ 1.57
LINC01116-201ENST00000295549 CAMK4Q16566 473 aa24.85■■□□□ 1.57
LINC01116-201ENST00000295549 HPS3Q969F9 1004 aa24.85■■□□□ 1.57
LINC01116-201ENST00000295549 SMARCE1Q969G3 411 aa24.85■■□□□ 1.57
LINC01116-201ENST00000295549 HVCN1Q96D96 273 aa24.85■■□□□ 1.57
LINC01116-201ENST00000295549 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.85■■□□□ 1.57
LINC01116-201ENST00000295549 TSPYL2Q9H2G4 693 aaPredicted RBP24.85■■□□□ 1.57
LINC01116-201ENST00000295549 CNTNAP2Q9UHC6 1331 aa24.84■■□□□ 1.57
LINC01116-201ENST00000295549 ZSCAN20P17040 1043 aaPredicted RBP24.84■■□□□ 1.57
LINC01116-201ENST00000295549 PRPF4BQ13523 1007 aaKnown RBP24.84■■□□□ 1.57
LINC01116-201ENST00000295549 ZC2HC1CQ53FD0 456 aaPredicted RBP24.84■■□□□ 1.57
LINC01116-201ENST00000295549 STXBP4Q6ZWJ1 553 aa24.84■■□□□ 1.57
LINC01116-201ENST00000295549 RMND1Q9NWS8 449 aa24.84■■□□□ 1.57
LINC01116-201ENST00000295549 PIN4Q9Y237 131 aaKnown RBP24.84■■□□□ 1.57
LINC01116-201ENST00000295549 MYH11P35749 1972 aa24.84■■□□□ 1.57
LINC01116-201ENST00000295549 A0A1B0GUA9 196 aa24.83■■□□□ 1.57
LINC01116-201ENST00000295549 B4GALT5O43286 388 aa24.83■■□□□ 1.57
LINC01116-201ENST00000295549 GCNT3O95395 438 aa24.83■■□□□ 1.57
LINC01116-201ENST00000295549 EDN1P05305 212 aa24.83■■□□□ 1.57
LINC01116-201ENST00000295549 ARF4P18085 180 aaPredicted RBP24.83■■□□□ 1.57
LINC01116-201ENST00000295549 BMP8BP34820 402 aa24.83■■□□□ 1.57
LINC01116-201ENST00000295549 CASP5P51878 434 aa24.83■■□□□ 1.57
LINC01116-201ENST00000295549 RTN4RL1Q86UN2 441 aaPredicted RBP24.83■■□□□ 1.57
LINC01116-201ENST00000295549 MAP4K3Q8IVH8 894 aa24.83■■□□□ 1.57
LINC01116-201ENST00000295549 HERVK_113Q902F9 699 aa24.83■■□□□ 1.57
LINC01116-201ENST00000295549 ERCC4Q92889 916 aaPredicted RBP24.83■■□□□ 1.57
LINC01116-201ENST00000295549 CCDC51Q96ER9 411 aa24.83■■□□□ 1.57
LINC01116-201ENST00000295549 TRAIPQ9BWF2 469 aa24.83■■□□□ 1.57
LINC01116-201ENST00000295549 MRPL4Q9BYD3 311 aaKnown RBP24.83■■□□□ 1.57
LINC01116-201ENST00000295549 FGFBP2Q9BYJ0 223 aa24.83■■□□□ 1.57
LINC01116-201ENST00000295549 NUP62CLQ9H1M0 184 aa24.83■■□□□ 1.57
LINC01116-201ENST00000295549 ENPP3O14638 875 aa24.82■■□□□ 1.56
LINC01116-201ENST00000295549 EIF3DO15371 548 aaKnown RBP eCLIP24.82■■□□□ 1.56
LINC01116-201ENST00000295549 MGEA5O60502 916 aa24.82■■□□□ 1.56
LINC01116-201ENST00000295549 MYBP10242 640 aa24.82■■□□□ 1.56
LINC01116-201ENST00000295549 STK4Q13043 487 aa24.82■■□□□ 1.56
LINC01116-201ENST00000295549 NOTUMQ6P988 496 aa24.82■■□□□ 1.56
LINC01116-201ENST00000295549 EPM2AIP1Q7L775 607 aaPredicted RBP24.82■■□□□ 1.56
LINC01116-201ENST00000295549 OTOP2Q7RTS6 562 aa24.82■■□□□ 1.56
LINC01116-201ENST00000295549 ADAM2Q99965 735 aa24.82■■□□□ 1.56
LINC01116-201ENST00000295549 UBE2OQ9C0C9 1292 aaKnown RBP24.82■■□□□ 1.56
LINC01116-201ENST00000295549 SLC39A2Q9NP94 309 aa24.82■■□□□ 1.56
LINC01116-201ENST00000295549 RGS18Q9NS28 235 aa24.82■■□□□ 1.56
LINC01116-201ENST00000295549 KIAA1468Q9P260 1216 aa24.82■■□□□ 1.56
LINC01116-201ENST00000295549 TTLL13PA6NNM8 815 aa24.81■■□□□ 1.56
LINC01116-201ENST00000295549 L1TD1Q5T7N2 865 aaKnown RBP24.81■■□□□ 1.56
LINC01116-201ENST00000295549 ZPBP2Q6X784 338 aa24.81■■□□□ 1.56
LINC01116-201ENST00000295549 GLIS3Q8NEA6 775 aa24.81■■□□□ 1.56
LINC01116-201ENST00000295549 LINC01599Q8WXQ3 324 aa24.81■■□□□ 1.56
LINC01116-201ENST00000295549 CPB2Q96IY4 423 aa24.81■■□□□ 1.56
LINC01116-201ENST00000295549 ACO2Q99798 780 aaKnown RBP24.81■■□□□ 1.56
LINC01116-201ENST00000295549 GTPBP4Q9BZE4 634 aaKnown RBP24.81■■□□□ 1.56
LINC01116-201ENST00000295549 PIGRP01833 764 aa24.8■■□□□ 1.56
LINC01116-201ENST00000295549 RASIP1Q5U651 963 aa24.8■■□□□ 1.56
LINC01116-201ENST00000295549 KIAA0895Q8NCT3 520 aa24.8■■□□□ 1.56
LINC01116-201ENST00000295549 ZNF507Q8TCN5 953 aa24.8■■□□□ 1.56
LINC01116-201ENST00000295549 ACCSQ96QU6 501 aa24.8■■□□□ 1.56
LINC01116-201ENST00000295549 C1orf112Q9NSG2 853 aa24.8■■□□□ 1.56
LINC01116-201ENST00000295549 TNFSF13BQ9Y275 285 aa24.8■■□□□ 1.56
LINC01116-201ENST00000295549 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.79■■□□□ 1.56
LINC01116-201ENST00000295549 BMT2Q1RMZ1 405 aa24.79■■□□□ 1.56
LINC01116-201ENST00000295549 ATF7IP2Q5U623 682 aa24.79■■□□□ 1.56
LINC01116-201ENST00000295549 TWF2Q6IBS0 349 aaKnown RBP24.79■■□□□ 1.56
LINC01116-201ENST00000295549 SLC24A5Q71RS6 500 aa24.79■■□□□ 1.56
LINC01116-201ENST00000295549 SCFD1Q8WVM8 642 aa24.79■■□□□ 1.56
LINC01116-201ENST00000295549 TARS2Q9BW92 718 aaKnown RBP24.79■■□□□ 1.56
LINC01116-201ENST00000295549 MTIF3Q9H2K0 278 aaKnown RBP24.79■■□□□ 1.56
LINC01116-201ENST00000295549 TMEM206Q9H813 350 aa24.79■■□□□ 1.56
LINC01116-201ENST00000295549 PTPRHQ9HD43 1115 aa24.79■■□□□ 1.56
LINC01116-201ENST00000295549 EXOC7Q9UPT5 735 aa24.79■■□□□ 1.56
LINC01116-201ENST00000295549 USP20Q9Y2K6 914 aa24.79■■□□□ 1.56
LINC01116-201ENST00000295549 UBE4BO95155 1302 aa24.79■■□□□ 1.56
LINC01116-201ENST00000295549 RANBP2P49792 3224 aaKnown RBP24.79■■□□□ 1.56
LINC01116-201ENST00000295549 A0A0U1RQF3 1178 aa24.78■■□□□ 1.56
LINC01116-201ENST00000295549 N4BP3O15049 544 aa24.78■■□□□ 1.56
LINC01116-201ENST00000295549 PRPF6O94906 941 aaKnown RBP24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms