RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 KCTD10Q9H3F6 313 aa16.63■□□□□ 0.25
CCDC140-201ENST00000295226 HIPK3Q9H422 1215 aa16.63■□□□□ 0.25
CCDC140-201ENST00000295226 TMEM134Q9H6X4 195 aa16.63■□□□□ 0.25
CCDC140-201ENST00000295226 AGO3Q9H9G7 860 aaKnown RBP16.63■□□□□ 0.25
CCDC140-201ENST00000295226 PRDM5Q9NQX1 630 aaPredicted RBP16.63■□□□□ 0.25
CCDC140-201ENST00000295226 KCNG1Q9UIX4 513 aa16.63■□□□□ 0.25
CCDC140-201ENST00000295226 ZMYM2Q9UBW7 1377 aa16.63■□□□□ 0.25
CCDC140-201ENST00000295226 SIP14410 1827 aa16.63■□□□□ 0.25
CCDC140-201ENST00000295226 CLTBP09497 229 aa16.62■□□□□ 0.25
CCDC140-201ENST00000295226 STRN3Q13033 797 aa16.62■□□□□ 0.25
CCDC140-201ENST00000295226 AMHR2Q16671 573 aa16.62■□□□□ 0.25
CCDC140-201ENST00000295226 KNOP1Q1ED39 458 aaKnown RBP16.62■□□□□ 0.25
CCDC140-201ENST00000295226 BMT2Q1RMZ1 405 aa16.62■□□□□ 0.25
CCDC140-201ENST00000295226 FAM26DQ5JW98 314 aa16.62■□□□□ 0.25
CCDC140-201ENST00000295226 ANKRD40Q6AI12 368 aa16.62■□□□□ 0.25
CCDC140-201ENST00000295226 STXBP4Q6ZWJ1 553 aa16.62■□□□□ 0.25
CCDC140-201ENST00000295226 SRGAP1Q7Z6B7 1085 aa16.62■□□□□ 0.25
CCDC140-201ENST00000295226 IFNLR1Q8IU57 520 aaPredicted RBP16.62■□□□□ 0.25
CCDC140-201ENST00000295226 SLC17A8Q8NDX2 589 aa16.62■□□□□ 0.25
CCDC140-201ENST00000295226 BICD1Q96G01 975 aa16.62■□□□□ 0.25
CCDC140-201ENST00000295226 SCLYQ96I15 445 aa16.62■□□□□ 0.25
CCDC140-201ENST00000295226 CPB2Q96IY4 423 aa16.62■□□□□ 0.25
CCDC140-201ENST00000295226 ZBTB45Q96K62 511 aaPredicted RBP16.62■□□□□ 0.25
CCDC140-201ENST00000295226 NFKBIZQ9BYH8 718 aa16.62■□□□□ 0.25
CCDC140-201ENST00000295226 FZD8Q9H461 694 aa16.62■□□□□ 0.25
CCDC140-201ENST00000295226 PHLPP2Q6ZVD8 1323 aa16.62■□□□□ 0.25
CCDC140-201ENST00000295226 ALPK3Q96L96 1907 aa16.62■□□□□ 0.25
CCDC140-201ENST00000295226 TRIM43BA6NCK2 446 aa16.62■□□□□ 0.25
CCDC140-201ENST00000295226 ESPNB1AK53 854 aa16.62■□□□□ 0.25
CCDC140-201ENST00000295226 H0YCG3 227 aa16.62■□□□□ 0.25
CCDC140-201ENST00000295226 CLIC2O15247 247 aa16.62■□□□□ 0.25
CCDC140-201ENST00000295226 TGFB1I1O43294 461 aa16.62■□□□□ 0.25
CCDC140-201ENST00000295226 CAVIN2O95810 425 aa16.62■□□□□ 0.25
CCDC140-201ENST00000295226 ITGB8P26012 769 aa16.62■□□□□ 0.25
CCDC140-201ENST00000295226 BFSP2Q13515 415 aa16.62■□□□□ 0.25
CCDC140-201ENST00000295226 STIM1Q13586 685 aa16.62■□□□□ 0.25
CCDC140-201ENST00000295226 SLC39A4Q6P5W5 647 aa16.62■□□□□ 0.25
CCDC140-201ENST00000295226 LRRC8DQ7L1W4 858 aa16.62■□□□□ 0.25
CCDC140-201ENST00000295226 FAM228AQ86W67 206 aa16.62■□□□□ 0.25
CCDC140-201ENST00000295226 MAP4K3Q8IVH8 894 aa16.62■□□□□ 0.25
CCDC140-201ENST00000295226 CAGE1Q8TC20 777 aa16.62■□□□□ 0.25
CCDC140-201ENST00000295226 P2RX5Q93086 422 aa16.62■□□□□ 0.25
CCDC140-201ENST00000295226 TRIM43Q96BQ3 446 aaPredicted RBP16.62■□□□□ 0.25
CCDC140-201ENST00000295226 TBX21Q9UL17 535 aa16.62■□□□□ 0.25
CCDC140-201ENST00000295226 PSMA7O14818 248 aa16.61■□□□□ 0.25
CCDC140-201ENST00000295226 SELPP16109 830 aa16.61■□□□□ 0.25
CCDC140-201ENST00000295226 CD52P31358 61 aa16.61■□□□□ 0.25
CCDC140-201ENST00000295226 NFX1Q12986 1120 aaKnown RBP16.61■□□□□ 0.25
CCDC140-201ENST00000295226 PAK1Q13153 545 aa16.61■□□□□ 0.25
CCDC140-201ENST00000295226 PRPF4BQ13523 1007 aaKnown RBP16.61■□□□□ 0.25
CCDC140-201ENST00000295226 ALCAMQ13740 583 aa16.61■□□□□ 0.25
CCDC140-201ENST00000295226 LPIN1Q14693 890 aa16.61■□□□□ 0.25
CCDC140-201ENST00000295226 GPNMBQ14956 572 aa16.61■□□□□ 0.25
CCDC140-201ENST00000295226 COBLL1Q53SF7 1204 aa16.61■□□□□ 0.25
CCDC140-201ENST00000295226 FBXO47Q5MNV8 452 aa16.61■□□□□ 0.25
CCDC140-201ENST00000295226 CATSPER4Q7RTX7 472 aa16.61■□□□□ 0.25
CCDC140-201ENST00000295226 DHTKD1Q96HY7 919 aaPredicted RBP16.61■□□□□ 0.25
CCDC140-201ENST00000295226 WNT8AQ9H1J5 351 aa16.61■□□□□ 0.25
CCDC140-201ENST00000295226 ACKR2O00590 384 aa16.6■□□□□ 0.25
CCDC140-201ENST00000295226 TSPAN1O60635 241 aa16.6■□□□□ 0.25
CCDC140-201ENST00000295226 RPS6KA5O75582 802 aa16.6■□□□□ 0.25
CCDC140-201ENST00000295226 RPLP2P05387 115 aaKnown RBP16.6■□□□□ 0.25
CCDC140-201ENST00000295226 ARF4P18085 180 aaPredicted RBP16.6■□□□□ 0.25
CCDC140-201ENST00000295226 CCNE1P24864 410 aa16.6■□□□□ 0.25
CCDC140-201ENST00000295226 CLCN1P35523 988 aa16.6■□□□□ 0.25
CCDC140-201ENST00000295226 RBL2Q08999 1139 aa16.6■□□□□ 0.25
CCDC140-201ENST00000295226 TMEM132AQ24JP5 1023 aa16.6■□□□□ 0.25
CCDC140-201ENST00000295226 EEF1DP3Q658K8 133 aa16.6■□□□□ 0.25
CCDC140-201ENST00000295226 CENPPQ6IPU0 288 aa16.6■□□□□ 0.25
CCDC140-201ENST00000295226 CCDC155Q8N6L0 562 aa16.6■□□□□ 0.25
CCDC140-201ENST00000295226 ZSWIM2Q8NEG5 633 aa16.6■□□□□ 0.25
CCDC140-201ENST00000295226 ACO2Q99798 780 aaKnown RBP16.6■□□□□ 0.25
CCDC140-201ENST00000295226 GTPBP4Q9BZE4 634 aaKnown RBP16.6■□□□□ 0.25
CCDC140-201ENST00000295226 HAPLN2Q9GZV7 340 aa16.6■□□□□ 0.25
CCDC140-201ENST00000295226 GBP3Q9H0R5 595 aa16.6■□□□□ 0.25
CCDC140-201ENST00000295226 PCIF1Q9H4Z3 704 aa16.6■□□□□ 0.25
CCDC140-201ENST00000295226 PRMT7Q9NVM4 692 aaPredicted RBP16.6■□□□□ 0.25
CCDC140-201ENST00000295226 ST3GAL5Q9UNP4 418 aa16.6■□□□□ 0.25
CCDC140-201ENST00000295226 SCN5AQ14524 2016 aa16.6■□□□□ 0.25
CCDC140-201ENST00000295226 HNRNPDLO14979 420 aaKnown RBP16.59■□□□□ 0.25
CCDC140-201ENST00000295226 NBNO60934 754 aa16.59■□□□□ 0.25
CCDC140-201ENST00000295226 CAND2O75155 1236 aa16.59■□□□□ 0.25
CCDC140-201ENST00000295226 ERLIN2O94905 339 aa16.59■□□□□ 0.25
CCDC140-201ENST00000295226 ADSSP30520 456 aa16.59■□□□□ 0.25
CCDC140-201ENST00000295226 HOXA11P31270 313 aaPredicted RBP16.59■□□□□ 0.25
CCDC140-201ENST00000295226 ZNF165P49910 485 aa16.59■□□□□ 0.25
CCDC140-201ENST00000295226 LIG4P49917 911 aa16.59■□□□□ 0.25
CCDC140-201ENST00000295226 ZBTB33Q86T24 672 aa16.59■□□□□ 0.25
CCDC140-201ENST00000295226 C7orf61Q8IZ16 206 aa16.59■□□□□ 0.25
CCDC140-201ENST00000295226 RNF214Q8ND24 703 aa16.59■□□□□ 0.25
CCDC140-201ENST00000295226 HVCN1Q96D96 273 aa16.59■□□□□ 0.25
CCDC140-201ENST00000295226 DUSP9Q99956 384 aaKnown RBP16.59■□□□□ 0.25
CCDC140-201ENST00000295226 MRPL4Q9BYD3 311 aaKnown RBP16.59■□□□□ 0.25
CCDC140-201ENST00000295226 TMEM206Q9H813 350 aa16.59■□□□□ 0.25
CCDC140-201ENST00000295226 DACH1Q9UI36 760 aa16.59■□□□□ 0.25
CCDC140-201ENST00000295226 UBE4BO95155 1302 aa16.59■□□□□ 0.25
CCDC140-201ENST00000295226 TET1Q8NFU7 2136 aa16.59■□□□□ 0.25
CCDC140-201ENST00000295226 PITPNM1O00562 1244 aa16.59■□□□□ 0.25
CCDC140-201ENST00000295226 KIF20AO95235 890 aa16.59■□□□□ 0.25
CCDC140-201ENST00000295226 HARSP12081 509 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms