RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 USP20Q9Y2K6 914 aa9.97□□□□□ -0.81
PDPN-201ENST00000294489 ADGRA3Q8IWK6 1321 aa9.96□□□□□ -0.81
PDPN-201ENST00000294489 ANO9A1A5B4 782 aa9.96□□□□□ -0.81
PDPN-201ENST00000294489 H0YCG3 227 aa9.96□□□□□ -0.81
PDPN-201ENST00000294489 IGF2BP3O00425 579 aaKnown RBP eCLIP9.96□□□□□ -0.81
PDPN-201ENST00000294489 SLC16A4O15374 487 aa9.96□□□□□ -0.81
PDPN-201ENST00000294489 TLR2O60603 784 aa9.96□□□□□ -0.81
PDPN-201ENST00000294489 MAFO75444 373 aaPredicted RBP9.96□□□□□ -0.81
PDPN-201ENST00000294489 PIGRP01833 764 aa9.96□□□□□ -0.81
PDPN-201ENST00000294489 SP4Q02446 784 aa9.96□□□□□ -0.81
PDPN-201ENST00000294489 GFPT1Q06210 699 aaPredicted RBP9.96□□□□□ -0.81
PDPN-201ENST00000294489 MKRN3Q13064 507 aaKnown RBP9.96□□□□□ -0.81
PDPN-201ENST00000294489 TEX35Q5T0J7 233 aa9.96□□□□□ -0.81
PDPN-201ENST00000294489 TAS1R3Q7RTX0 852 aa9.96□□□□□ -0.81
PDPN-201ENST00000294489 PLEKHH3Q7Z736 793 aa9.96□□□□□ -0.81
PDPN-201ENST00000294489 GPIHBP1Q8IV16 184 aa9.96□□□□□ -0.81
PDPN-201ENST00000294489 GPR161Q8N6U8 529 aaKnown RBP9.96□□□□□ -0.81
PDPN-201ENST00000294489 BBXQ8WY36 941 aaPredicted RBP9.96□□□□□ -0.81
PDPN-201ENST00000294489 USP6NLQ92738 828 aa9.96□□□□□ -0.81
PDPN-201ENST00000294489 STYXL1Q9Y6J8 313 aa9.96□□□□□ -0.81
PDPN-201ENST00000294489 TLL2Q9Y6L7 1015 aa9.96□□□□□ -0.81
PDPN-201ENST00000294489 CCDC169A6NNP5 214 aa9.96□□□□□ -0.82
PDPN-201ENST00000294489 RBAK-RBAKDNI3L0D1 243 aa9.96□□□□□ -0.82
PDPN-201ENST00000294489 FMO5P49326 533 aa9.96□□□□□ -0.82
PDPN-201ENST00000294489 INHBEP58166 350 aa9.96□□□□□ -0.82
PDPN-201ENST00000294489 BFSP1Q12934 665 aa9.96□□□□□ -0.82
PDPN-201ENST00000294489 HSDL1Q3SXM5 330 aa9.96□□□□□ -0.82
PDPN-201ENST00000294489 RGMBQ6NW40 437 aa9.96□□□□□ -0.82
PDPN-201ENST00000294489 INTS8Q75QN2 995 aaKnown RBP9.96□□□□□ -0.82
PDPN-201ENST00000294489 RABGGTAQ92696 567 aa9.96□□□□□ -0.82
PDPN-201ENST00000294489 HHIPL1Q96JK4 782 aa9.96□□□□□ -0.82
PDPN-201ENST00000294489 MAML3Q96JK9 1138 aa9.96□□□□□ -0.82
PDPN-201ENST00000294489 FBXL18Q96ME1 805 aa9.96□□□□□ -0.82
PDPN-201ENST00000294489 ALS2CR12Q96Q35 445 aa9.96□□□□□ -0.82
PDPN-201ENST00000294489 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.96□□□□□ -0.82
PDPN-201ENST00000294489 MLXIPQ9HAP2 919 aa9.96□□□□□ -0.82
PDPN-201ENST00000294489 PDGFCQ9NRA1 345 aa9.96□□□□□ -0.82
PDPN-201ENST00000294489 DAAM1Q9Y4D1 1078 aa9.96□□□□□ -0.82
PDPN-201ENST00000294489 SAR1BQ9Y6B6 198 aa9.96□□□□□ -0.82
PDPN-201ENST00000294489 GAS2O43903 313 aaKnown RBP9.96□□□□□ -0.82
PDPN-201ENST00000294489 CETN1Q12798 172 aa9.96□□□□□ -0.82
PDPN-201ENST00000294489 SLC18A3Q16572 532 aa9.96□□□□□ -0.82
PDPN-201ENST00000294489 SLC39A4Q6P5W5 647 aa9.96□□□□□ -0.82
PDPN-201ENST00000294489 FBXO38Q6PIJ6 1188 aa9.96□□□□□ -0.82
PDPN-201ENST00000294489 RSRC2Q7L4I2 434 aaKnown RBP9.96□□□□□ -0.82
PDPN-201ENST00000294489 EXOC8Q8IYI6 725 aa9.96□□□□□ -0.82
PDPN-201ENST00000294489 RDH13Q8NBN7 331 aa9.96□□□□□ -0.82
PDPN-201ENST00000294489 POLR3FQ9H1D9 316 aaPredicted RBP9.96□□□□□ -0.82
PDPN-201ENST00000294489 SIX2Q9NPC8 291 aa9.96□□□□□ -0.82
PDPN-201ENST00000294489 KMT5AQ9NQR1 393 aa9.96□□□□□ -0.82
PDPN-201ENST00000294489 PUF60Q9UHX1 559 aaKnown RBP9.96□□□□□ -0.82
PDPN-201ENST00000294489 FHOD1Q9Y613 1164 aa9.96□□□□□ -0.82
PDPN-201ENST00000294489 DUSP10Q9Y6W6 482 aa9.96□□□□□ -0.82
PDPN-201ENST00000294489 CTAGE15A4D2H0 777 aa9.95□□□□□ -0.82
PDPN-201ENST00000294489 PJA2O43164 708 aa9.95□□□□□ -0.82
PDPN-201ENST00000294489 HOXC6P09630 235 aa9.95□□□□□ -0.82
PDPN-201ENST00000294489 CTAGE8P0CG41 777 aa9.95□□□□□ -0.82
PDPN-201ENST00000294489 TXNP10599 105 aaKnown RBP9.95□□□□□ -0.82
PDPN-201ENST00000294489 ADSSP30520 456 aa9.95□□□□□ -0.82
PDPN-201ENST00000294489 NAMPTP43490 491 aa9.95□□□□□ -0.82
PDPN-201ENST00000294489 AMPD2Q01433 879 aa9.95□□□□□ -0.82
PDPN-201ENST00000294489 LAMC2Q13753 1193 aa9.95□□□□□ -0.82
PDPN-201ENST00000294489 PLCB4Q15147 1175 aa9.95□□□□□ -0.82
PDPN-201ENST00000294489 PAPD7Q5XG87 772 aaKnown RBP9.95□□□□□ -0.82
PDPN-201ENST00000294489 C17orf99Q6UX52 265 aa9.95□□□□□ -0.82
PDPN-201ENST00000294489 EEPD1Q7L9B9 569 aa9.95□□□□□ -0.82
PDPN-201ENST00000294489 CTAGE6Q86UF2 777 aa9.95□□□□□ -0.82
PDPN-201ENST00000294489 FMNL3Q8IVF7 1028 aa9.95□□□□□ -0.82
PDPN-201ENST00000294489 CTAGE4Q8IX94 777 aa9.95□□□□□ -0.82
PDPN-201ENST00000294489 XXYLT1Q8NBI6 393 aa9.95□□□□□ -0.82
PDPN-201ENST00000294489 ATP8B4Q8TF62 1192 aa9.95□□□□□ -0.82
PDPN-201ENST00000294489 CCDC94Q9BW85 323 aaPredicted RBP9.95□□□□□ -0.82
PDPN-201ENST00000294489 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.95□□□□□ -0.82
PDPN-201ENST00000294489 JRKLQ9Y4A0 524 aa9.95□□□□□ -0.82
PDPN-201ENST00000294489 ENC1O14682 589 aa9.95□□□□□ -0.82
PDPN-201ENST00000294489 SORBS3O60504 671 aa9.95□□□□□ -0.82
PDPN-201ENST00000294489 GLRA2P23416 452 aa9.95□□□□□ -0.82
PDPN-201ENST00000294489 ZNF157P51786 506 aaPredicted RBP9.95□□□□□ -0.82
PDPN-201ENST00000294489 ENOX2Q16206 610 aaKnown RBP9.95□□□□□ -0.82
PDPN-201ENST00000294489 MTERF2Q49AM1 385 aa9.95□□□□□ -0.82
PDPN-201ENST00000294489 TMEM63BQ5T3F8 832 aa9.95□□□□□ -0.82
PDPN-201ENST00000294489 TRAPPC11Q7Z392 1133 aa9.95□□□□□ -0.82
PDPN-201ENST00000294489 VPS36Q86VN1 386 aa9.95□□□□□ -0.82
PDPN-201ENST00000294489 IFNL1Q8IU54 200 aa9.95□□□□□ -0.82
PDPN-201ENST00000294489 RNF10Q8N5U6 811 aaKnown RBP9.95□□□□□ -0.82
PDPN-201ENST00000294489 PPTC7Q8NI37 304 aa9.95□□□□□ -0.82
PDPN-201ENST00000294489 SPATA33Q96N06 139 aa9.95□□□□□ -0.82
PDPN-201ENST00000294489 PCIF1Q9H4Z3 704 aa9.95□□□□□ -0.82
PDPN-201ENST00000294489 TMEM134Q9H6X4 195 aa9.95□□□□□ -0.82
PDPN-201ENST00000294489 N4BP1O75113 896 aaKnown RBP9.94□□□□□ -0.82
PDPN-201ENST00000294489 ATP1A1P05023 1023 aaKnown RBP9.94□□□□□ -0.82
PDPN-201ENST00000294489 H2AFXP16104 143 aaPredicted RBP9.94□□□□□ -0.82
PDPN-201ENST00000294489 ANXA13P27216 316 aa9.94□□□□□ -0.82
PDPN-201ENST00000294489 POLGP54098 1239 aaPredicted RBP9.94□□□□□ -0.82
PDPN-201ENST00000294489 SOX10P56693 466 aa9.94□□□□□ -0.82
PDPN-201ENST00000294489 MYL7Q01449 175 aa9.94□□□□□ -0.82
PDPN-201ENST00000294489 BRDTQ58F21 947 aaPredicted RBP9.94□□□□□ -0.82
PDPN-201ENST00000294489 C1orf220Q5T0J3 134 aa9.94□□□□□ -0.82
PDPN-201ENST00000294489 C10orf76Q5T2E6 689 aa9.94□□□□□ -0.82
PDPN-201ENST00000294489 ASAP3Q8TDY4 903 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms