RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 PGM2Q96G03 612 aa15.83■□□□□ 0.12
CCNF-201ENST00000293968 SH2D3AQ9BRG2 576 aa15.83■□□□□ 0.12
CCNF-201ENST00000293968 DIS3Q9Y2L1 958 aaKnown RBP15.83■□□□□ 0.12
CCNF-201ENST00000293968 SNHG28P0DPA3 235 aa15.82■□□□□ 0.12
CCNF-201ENST00000293968 WLSQ5T9L3 541 aa15.82■□□□□ 0.12
CCNF-201ENST00000293968 LRCH2Q5VUJ6 765 aa15.82■□□□□ 0.12
CCNF-201ENST00000293968 RHOT2Q8IXI1 618 aa15.82■□□□□ 0.12
CCNF-201ENST00000293968 FAM118BQ9BPY3 351 aa15.82■□□□□ 0.12
CCNF-201ENST00000293968 PODXLO00592 558 aa15.82■□□□□ 0.12
CCNF-201ENST00000293968 RIPK2O43353 540 aa15.82■□□□□ 0.12
CCNF-201ENST00000293968 ECEL1O95672 775 aa15.82■□□□□ 0.12
CCNF-201ENST00000293968 PYGMP11217 842 aa15.82■□□□□ 0.12
CCNF-201ENST00000293968 ANXA13P27216 316 aa15.82■□□□□ 0.12
CCNF-201ENST00000293968 SHMT1P34896 483 aa15.82■□□□□ 0.12
CCNF-201ENST00000293968 POU5F1Q01860 360 aaKnown RBP15.82■□□□□ 0.12
CCNF-201ENST00000293968 NFIAQ12857 509 aa15.82■□□□□ 0.12
CCNF-201ENST00000293968 SLMAPQ14BN4 828 aa15.82■□□□□ 0.12
CCNF-201ENST00000293968 POLLQ9UGP5 575 aa15.82■□□□□ 0.12
CCNF-201ENST00000293968 TRIM33Q9UPN9 1127 aa15.82■□□□□ 0.12
CCNF-201ENST00000293968 RPTORQ8N122 1335 aa15.82■□□□□ 0.12
CCNF-201ENST00000293968 DLEC1Q9Y238 1755 aa15.82■□□□□ 0.12
CCNF-201ENST00000293968 K7ENM7 598 aa15.82■□□□□ 0.12
CCNF-201ENST00000293968 ASAP2O43150 1006 aa15.82■□□□□ 0.12
CCNF-201ENST00000293968 THAP12O43422 761 aa15.82■□□□□ 0.12
CCNF-201ENST00000293968 EYA4O95677 639 aa15.82■□□□□ 0.12
CCNF-201ENST00000293968 GPC5P78333 572 aa15.82■□□□□ 0.12
CCNF-201ENST00000293968 GRIPAP1Q4V328 841 aa15.82■□□□□ 0.12
CCNF-201ENST00000293968 DPY19L2P1Q6NXN4 242 aa15.82■□□□□ 0.12
CCNF-201ENST00000293968 ZNF653Q96CK0 615 aa15.82■□□□□ 0.12
CCNF-201ENST00000293968 EMSYQ7Z589 1322 aa15.82■□□□□ 0.12
CCNF-201ENST00000293968 A0A1W2PRG0 241 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 A8MUI8 341 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 TISP43B9A030 160 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 CLDN3O15551 220 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 MGRN1O60291 552 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 NUDT17P0C025 328 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 GAP43P17677 238 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 CERKLQ49MI3 558 aaPredicted RBP15.81■□□□□ 0.12
CCNF-201ENST00000293968 CAPN12Q6ZSI9 719 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 AGAP11Q8TF27 550 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 USP15Q9Y4E8 981 aaPredicted RBP15.81■□□□□ 0.12
CCNF-201ENST00000293968 GOLGA8IPA6NC78 632 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 GOLGA8JA6NMD2 632 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 MEIS2O14770 477 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 KIF1CO43896 1103 aaKnown RBP15.81■□□□□ 0.12
CCNF-201ENST00000293968 VCAM1P19320 739 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 LACTBP83111 547 aaPredicted RBP15.81■□□□□ 0.12
CCNF-201ENST00000293968 ICA1Q05084 483 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 PPATQ06203 517 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 AUHQ13825 339 aaKnown RBP15.81■□□□□ 0.12
CCNF-201ENST00000293968 ITIH4Q14624 930 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 SGO2Q562F6 1265 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 TRIM68Q6AZZ1 485 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 PHLDB3Q6NSJ2 640 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 RNF207Q6ZRF8 634 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 ETNPPLQ8TBG4 499 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 CCDC127Q96BQ5 260 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 ZSWIM1Q9BR11 485 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 EPB41L4BQ9H329 900 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 ATP6V0A4Q9HBG4 840 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 PNMA3Q9UL41 463 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 MYO3BQ8WXR4 1341 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 MYH1P12882 1939 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 GAS7O60861 476 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 KYNUQ16719 465 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 CCDC174Q6PII3 467 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 EPM2AIP1Q7L775 607 aaPredicted RBP15.81■□□□□ 0.12
CCNF-201ENST00000293968 SRRM1Q8IYB3 904 aaKnown RBP15.81■□□□□ 0.12
CCNF-201ENST00000293968 ATG4AQ8WYN0 398 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 CENPTQ96BT3 561 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 ZC3H12CQ9C0D7 883 aaKnown RBP15.81■□□□□ 0.12
CCNF-201ENST00000293968 NKIRAS1Q9NYS0 192 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 GRHL1Q9NZI5 618 aa15.81■□□□□ 0.12
CCNF-201ENST00000293968 ARHGEF35A5YM69 484 aa15.8■□□□□ 0.12
CCNF-201ENST00000293968 ALDH5A1P51649 535 aaPredicted RBP15.8■□□□□ 0.12
CCNF-201ENST00000293968 CNGA2Q16280 664 aa15.8■□□□□ 0.12
CCNF-201ENST00000293968 COL23A1Q86Y22 540 aaPredicted RBP15.8■□□□□ 0.12
CCNF-201ENST00000293968 ZFPM1Q8IX07 1006 aa15.8■□□□□ 0.12
CCNF-201ENST00000293968 SLC30A5Q8TAD4 765 aa15.8■□□□□ 0.12
CCNF-201ENST00000293968 KAT5Q92993 513 aa15.8■□□□□ 0.12
CCNF-201ENST00000293968 P2RX7Q99572 595 aaKnown RBP15.8■□□□□ 0.12
CCNF-201ENST00000293968 FAM167BQ9BTA0 163 aa15.8■□□□□ 0.12
CCNF-201ENST00000293968 NUP85Q9BW27 656 aa15.8■□□□□ 0.12
CCNF-201ENST00000293968 ADAM33Q9BZ11 813 aa15.8■□□□□ 0.12
CCNF-201ENST00000293968 AGPAT3Q9NRZ7 376 aa15.8■□□□□ 0.12
CCNF-201ENST00000293968 KIAA1551Q9HCM1 1747 aa15.8■□□□□ 0.12
CCNF-201ENST00000293968 ROBO1Q9Y6N7 1651 aa15.8■□□□□ 0.12
CCNF-201ENST00000293968 BRAFP15056 766 aa15.8■□□□□ 0.12
CCNF-201ENST00000293968 NQO1P15559 274 aaKnown RBP15.8■□□□□ 0.12
CCNF-201ENST00000293968 ADCY8P40145 1251 aa15.8■□□□□ 0.12
CCNF-201ENST00000293968 DLG4P78352 724 aa15.8■□□□□ 0.12
CCNF-201ENST00000293968 AP3B2Q13367 1082 aa15.8■□□□□ 0.12
CCNF-201ENST00000293968 TBC1D16Q8TBP0 767 aa15.8■□□□□ 0.12
CCNF-201ENST00000293968 PLCD4Q9BRC7 762 aa15.8■□□□□ 0.12
CCNF-201ENST00000293968 MIF4GDA9UHW6 222 aaKnown RBP15.8■□□□□ 0.12
CCNF-201ENST00000293968 ZBTB48P10074 688 aaPredicted RBP15.8■□□□□ 0.12
CCNF-201ENST00000293968 COILP38432 576 aaPredicted RBP15.8■□□□□ 0.12
CCNF-201ENST00000293968 ZC3H3Q8IXZ2 948 aaKnown RBP15.8■□□□□ 0.12
CCNF-201ENST00000293968 IFT74Q96LB3 600 aa15.8■□□□□ 0.12
CCNF-201ENST00000293968 RUNDC3BQ96NL0 473 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms