RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 NEDD9Q14511 834 aa15.29■□□□□ 0.04
ABCF3-201ENST00000292808 SMC1AQ14683 1233 aaKnown RBP15.29■□□□□ 0.04
ABCF3-201ENST00000292808 WDR78Q5VTH9 848 aa15.29■□□□□ 0.04
ABCF3-201ENST00000292808 SLC17A8Q8NDX2 589 aa15.29■□□□□ 0.04
ABCF3-201ENST00000292808 TRIM58Q8NG06 486 aa15.29■□□□□ 0.04
ABCF3-201ENST00000292808 HVCN1Q96D96 273 aa15.29■□□□□ 0.04
ABCF3-201ENST00000292808 SPAG5Q96R06 1193 aa15.29■□□□□ 0.04
ABCF3-201ENST00000292808 MMS19Q96T76 1030 aa15.29■□□□□ 0.04
ABCF3-201ENST00000292808 NIFKQ9BYG3 293 aaKnown RBP15.29■□□□□ 0.04
ABCF3-201ENST00000292808 DHX33Q9H6R0 707 aaKnown RBP15.29■□□□□ 0.04
ABCF3-201ENST00000292808 C17orf75Q9HAS0 396 aa15.29■□□□□ 0.04
ABCF3-201ENST00000292808 SALL4Q9UJQ4 1053 aa15.29■□□□□ 0.04
ABCF3-201ENST00000292808 CCL15-CCL14A0A0B4J2E2 113 aa15.28■□□□□ 0.04
ABCF3-201ENST00000292808 PJA2O43164 708 aa15.28■□□□□ 0.04
ABCF3-201ENST00000292808 JAM2P57087 298 aa15.28■□□□□ 0.04
ABCF3-201ENST00000292808 TARBP2Q15633 366 aaKnown RBP15.28■□□□□ 0.04
ABCF3-201ENST00000292808 CCL15Q16663 113 aa15.28■□□□□ 0.04
ABCF3-201ENST00000292808 CCDC62Q6P9F0 684 aa15.28■□□□□ 0.04
ABCF3-201ENST00000292808 ASAP3Q8TDY4 903 aa15.28■□□□□ 0.04
ABCF3-201ENST00000292808 AFAP1L1Q8TED9 768 aa15.28■□□□□ 0.04
ABCF3-201ENST00000292808 GBA2Q9HCG7 927 aaPredicted RBP15.28■□□□□ 0.04
ABCF3-201ENST00000292808 ARHGAP28Q9P2N2 729 aa15.28■□□□□ 0.04
ABCF3-201ENST00000292808 FBXL5Q9UKA1 691 aa15.28■□□□□ 0.04
ABCF3-201ENST00000292808 PNMA3Q9UL41 463 aa15.28■□□□□ 0.04
ABCF3-201ENST00000292808 RBAK-RBAKDNI3L0D1 243 aa15.28■□□□□ 0.04
ABCF3-201ENST00000292808 BUB1O43683 1085 aa15.28■□□□□ 0.04
ABCF3-201ENST00000292808 CETPP11597 493 aa15.28■□□□□ 0.04
ABCF3-201ENST00000292808 PRLRP16471 622 aa15.28■□□□□ 0.04
ABCF3-201ENST00000292808 TCF7P36402 384 aaPredicted RBP15.28■□□□□ 0.04
ABCF3-201ENST00000292808 SMTNP53814 917 aa15.28■□□□□ 0.04
ABCF3-201ENST00000292808 NAP1L1P55209 391 aaKnown RBP15.28■□□□□ 0.04
ABCF3-201ENST00000292808 MCCD1P59942 119 aaPredicted RBP15.28■□□□□ 0.04
ABCF3-201ENST00000292808 IQCEQ6IPM2 695 aa15.28■□□□□ 0.04
ABCF3-201ENST00000292808 ZNF771Q7L3S4 317 aaPredicted RBP15.28■□□□□ 0.04
ABCF3-201ENST00000292808 HDXQ7Z353 690 aa15.28■□□□□ 0.04
ABCF3-201ENST00000292808 IRF2BP2Q7Z5L9 587 aa15.28■□□□□ 0.04
ABCF3-201ENST00000292808 XXYLT1Q8NBI6 393 aa15.28■□□□□ 0.04
ABCF3-201ENST00000292808 CAGE1Q8TC20 777 aa15.28■□□□□ 0.04
ABCF3-201ENST00000292808 RRAGCQ9HB90 399 aa15.28■□□□□ 0.04
ABCF3-201ENST00000292808 ABCB6Q9NP58 842 aa15.28■□□□□ 0.04
ABCF3-201ENST00000292808 RNF216Q9NWF9 866 aaPredicted RBP15.28■□□□□ 0.04
ABCF3-201ENST00000292808 ADAMTS1Q9UHI8 967 aa15.28■□□□□ 0.04
ABCF3-201ENST00000292808 SLC45A1Q9Y2W3 748 aa15.28■□□□□ 0.04
ABCF3-201ENST00000292808 JRKLQ9Y4A0 524 aa15.28■□□□□ 0.04
ABCF3-201ENST00000292808 SNRPFP62306 86 aaKnown RBP15.27■□□□□ 0.04
ABCF3-201ENST00000292808 VSNL1P62760 191 aa15.27■□□□□ 0.04
ABCF3-201ENST00000292808 PPP3CAQ08209 521 aa15.27■□□□□ 0.04
ABCF3-201ENST00000292808 HSDL1Q3SXM5 330 aa15.27■□□□□ 0.04
ABCF3-201ENST00000292808 TXLNBQ8N3L3 684 aa15.27■□□□□ 0.04
ABCF3-201ENST00000292808 LMO3Q8TAP4 145 aa15.27■□□□□ 0.04
ABCF3-201ENST00000292808 TMEM143Q96AN5 459 aa15.27■□□□□ 0.04
ABCF3-201ENST00000292808 GPR20Q99678 358 aa15.27■□□□□ 0.04
ABCF3-201ENST00000292808 PDGFCQ9NRA1 345 aa15.27■□□□□ 0.04
ABCF3-201ENST00000292808 A0A087X0T9 212 aa15.27■□□□□ 0.03
ABCF3-201ENST00000292808 GOLGA8IPA6NC78 632 aa15.27■□□□□ 0.03
ABCF3-201ENST00000292808 GOLGA8JA6NMD2 632 aa15.27■□□□□ 0.03
ABCF3-201ENST00000292808 FAM228BP0C875 321 aa15.27■□□□□ 0.03
ABCF3-201ENST00000292808 CNGA1P29973 690 aa15.27■□□□□ 0.03
ABCF3-201ENST00000292808 GTF2A2P52657 109 aa15.27■□□□□ 0.03
ABCF3-201ENST00000292808 FKBP1BP68106 108 aa15.27■□□□□ 0.03
ABCF3-201ENST00000292808 CELF3Q5SZQ8 465 aaKnown RBP15.27■□□□□ 0.03
ABCF3-201ENST00000292808 CBWD2Q8IUF1 395 aa15.27■□□□□ 0.03
ABCF3-201ENST00000292808 GPRC5AQ8NFJ5 357 aa15.27■□□□□ 0.03
ABCF3-201ENST00000292808 SEPT1Q8WYJ6 367 aa15.27■□□□□ 0.03
ABCF3-201ENST00000292808 COPS5Q92905 334 aa15.27■□□□□ 0.03
ABCF3-201ENST00000292808 MYH10P35580 1976 aa15.26■□□□□ 0.03
ABCF3-201ENST00000292808 TARSL2A2RTX5 802 aaKnown RBP15.26■□□□□ 0.03
ABCF3-201ENST00000292808 LRRN2O75325 713 aa15.26■□□□□ 0.03
ABCF3-201ENST00000292808 GLRA2P23416 452 aa15.26■□□□□ 0.03
ABCF3-201ENST00000292808 MCM3P25205 808 aa15.26■□□□□ 0.03
ABCF3-201ENST00000292808 ARL2P36404 184 aa15.26■□□□□ 0.03
ABCF3-201ENST00000292808 STAT5BP51692 787 aa15.26■□□□□ 0.03
ABCF3-201ENST00000292808 POLGP54098 1239 aaPredicted RBP15.26■□□□□ 0.03
ABCF3-201ENST00000292808 SLC18A3Q16572 532 aa15.26■□□□□ 0.03
ABCF3-201ENST00000292808 INTS8Q75QN2 995 aaKnown RBP15.26■□□□□ 0.03
ABCF3-201ENST00000292808 ANKRD23Q86SG2 305 aa15.26■□□□□ 0.03
ABCF3-201ENST00000292808 TRIM50Q86XT4 487 aa15.26■□□□□ 0.03
ABCF3-201ENST00000292808 SAAL1Q96ER3 474 aa15.26■□□□□ 0.03
ABCF3-201ENST00000292808 ALS2CR12Q96Q35 445 aa15.26■□□□□ 0.03
ABCF3-201ENST00000292808 PTPN18Q99952 460 aa15.26■□□□□ 0.03
ABCF3-201ENST00000292808 INTS2Q9H0H0 1204 aaKnown RBP15.26■□□□□ 0.03
ABCF3-201ENST00000292808 MAPK13O15264 365 aa15.26■□□□□ 0.03
ABCF3-201ENST00000292808 LGR5O75473 907 aa15.26■□□□□ 0.03
ABCF3-201ENST00000292808 OAS2P29728 719 aaKnown RBP15.26■□□□□ 0.03
ABCF3-201ENST00000292808 VAMP7P51809 220 aa15.26■□□□□ 0.03
ABCF3-201ENST00000292808 MYL7Q01449 175 aa15.26■□□□□ 0.03
ABCF3-201ENST00000292808 PTK2Q05397 1052 aa15.26■□□□□ 0.03
ABCF3-201ENST00000292808 ZNF792Q3KQV3 632 aa15.26■□□□□ 0.03
ABCF3-201ENST00000292808 OLIG1Q8TAK6 271 aa15.26■□□□□ 0.03
ABCF3-201ENST00000292808 GTF3C2Q8WUA4 911 aaPredicted RBP15.26■□□□□ 0.03
ABCF3-201ENST00000292808 PSMB7Q99436 277 aa15.26■□□□□ 0.03
ABCF3-201ENST00000292808 EXOC7Q9UPT5 735 aa15.26■□□□□ 0.03
ABCF3-201ENST00000292808 EMSYQ7Z589 1322 aa15.26■□□□□ 0.03
ABCF3-201ENST00000292808 PDE2AO00408 941 aaPredicted RBP15.25■□□□□ 0.03
ABCF3-201ENST00000292808 NCK2O43639 380 aa15.25■□□□□ 0.03
ABCF3-201ENST00000292808 CELF2O95319 508 aaKnown RBP15.25■□□□□ 0.03
ABCF3-201ENST00000292808 SPRYD7Q5W111 196 aa15.25■□□□□ 0.03
ABCF3-201ENST00000292808 ZNF572Q7Z3I7 529 aaPredicted RBP15.25■□□□□ 0.03
ABCF3-201ENST00000292808 KCNN1Q92952 543 aa15.25■□□□□ 0.03
ABCF3-201ENST00000292808 FBXL18Q96ME1 805 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms