RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 ROBO3Q96MS0 1386 aa17.1■□□□□ 0.33
SMAD6-201ENST00000288840 ADAMTS7Q9UKP4 1686 aa17.1■□□□□ 0.33
SMAD6-201ENST00000288840 TBX3O15119 743 aa17.1■□□□□ 0.33
SMAD6-201ENST00000288840 ACOT2P49753 483 aa17.1■□□□□ 0.33
SMAD6-201ENST00000288840 PMS2P54278 862 aa17.1■□□□□ 0.33
SMAD6-201ENST00000288840 PPP2R2AP63151 447 aa17.1■□□□□ 0.33
SMAD6-201ENST00000288840 SLC27A3Q5K4L6 730 aa17.1■□□□□ 0.33
SMAD6-201ENST00000288840 ZBTB33Q86T24 672 aa17.1■□□□□ 0.33
SMAD6-201ENST00000288840 ATG4AQ8WYN0 398 aa17.1■□□□□ 0.33
SMAD6-201ENST00000288840 TRAF3IP3Q9Y228 551 aa17.1■□□□□ 0.33
SMAD6-201ENST00000288840 PCDHB4Q9Y5E5 795 aa17.1■□□□□ 0.33
SMAD6-201ENST00000288840 RASGRF2O14827 1237 aa17.1■□□□□ 0.33
SMAD6-201ENST00000288840 TGFB1I1O43294 461 aa17.1■□□□□ 0.33
SMAD6-201ENST00000288840 HOXA10P31260 410 aaPredicted RBP17.1■□□□□ 0.33
SMAD6-201ENST00000288840 MARCKSL1P49006 195 aa17.1■□□□□ 0.33
SMAD6-201ENST00000288840 POLGP54098 1239 aaPredicted RBP17.1■□□□□ 0.33
SMAD6-201ENST00000288840 JAG1P78504 1218 aa17.1■□□□□ 0.33
SMAD6-201ENST00000288840 SLC29A2Q14542 456 aa17.1■□□□□ 0.33
SMAD6-201ENST00000288840 KRT35Q92764 455 aa17.1■□□□□ 0.33
SMAD6-201ENST00000288840 PSMD1Q99460 953 aa17.1■□□□□ 0.33
SMAD6-201ENST00000288840 TACO1Q9BSH4 297 aaKnown RBP17.1■□□□□ 0.33
SMAD6-201ENST00000288840 PICK1Q9NRD5 415 aa17.1■□□□□ 0.33
SMAD6-201ENST00000288840 ZNF148Q9UQR1 794 aa17.1■□□□□ 0.33
SMAD6-201ENST00000288840 CASZ1Q86V15 1759 aa17.1■□□□□ 0.33
SMAD6-201ENST00000288840 A6NNZ2 444 aa17.09■□□□□ 0.33
SMAD6-201ENST00000288840 KRT15P19012 456 aa17.09■□□□□ 0.33
SMAD6-201ENST00000288840 GBP2P32456 591 aaPredicted RBP17.09■□□□□ 0.33
SMAD6-201ENST00000288840 PIK3CAP42336 1068 aa17.09■□□□□ 0.33
SMAD6-201ENST00000288840 TUBB8Q3ZCM7 444 aa17.09■□□□□ 0.33
SMAD6-201ENST00000288840 PACS2Q86VP3 889 aa17.09■□□□□ 0.33
SMAD6-201ENST00000288840 INPP4AQ96PE3 977 aaPredicted RBP17.09■□□□□ 0.33
SMAD6-201ENST00000288840 UBXN6Q9BZV1 441 aa17.09■□□□□ 0.33
SMAD6-201ENST00000288840 ECEL1O95672 775 aa17.09■□□□□ 0.33
SMAD6-201ENST00000288840 SCARA5Q6ZMJ2 495 aa17.09■□□□□ 0.33
SMAD6-201ENST00000288840 RNF207Q6ZRF8 634 aa17.09■□□□□ 0.33
SMAD6-201ENST00000288840 ARHGEF19Q8IW93 802 aa17.09■□□□□ 0.33
SMAD6-201ENST00000288840 DEPTORQ8TB45 409 aa17.09■□□□□ 0.33
SMAD6-201ENST00000288840 TAAR1Q96RJ0 339 aa17.09■□□□□ 0.33
SMAD6-201ENST00000288840 VPS37BQ9H9H4 285 aa17.09■□□□□ 0.33
SMAD6-201ENST00000288840 STK32BQ9NY57 414 aa17.09■□□□□ 0.33
SMAD6-201ENST00000288840 ZNF70Q9UC06 446 aaPredicted RBP17.09■□□□□ 0.33
SMAD6-201ENST00000288840 PCDHGC5Q9Y5F6 944 aa17.09■□□□□ 0.33
SMAD6-201ENST00000288840 PI4K2BG5E9Z4 385 aa17.09■□□□□ 0.33
SMAD6-201ENST00000288840 GAS8O95995 478 aa17.09■□□□□ 0.33
SMAD6-201ENST00000288840 ASNSP08243 561 aa17.09■□□□□ 0.33
SMAD6-201ENST00000288840 DACT2Q5SW24 774 aa17.09■□□□□ 0.33
SMAD6-201ENST00000288840 SLC47A2Q86VL8 602 aa17.09■□□□□ 0.33
SMAD6-201ENST00000288840 JAMLQ86YT9 394 aa17.09■□□□□ 0.33
SMAD6-201ENST00000288840 EPN3Q9H201 632 aa17.09■□□□□ 0.33
SMAD6-201ENST00000288840 TUFT1Q9NNX1 390 aa17.09■□□□□ 0.33
SMAD6-201ENST00000288840 AGTPBP1Q9UPW5 1226 aa17.09■□□□□ 0.33
SMAD6-201ENST00000288840 ATF5Q9Y2D1 282 aaPredicted RBP17.09■□□□□ 0.33
SMAD6-201ENST00000288840 PASKQ96RG2 1323 aa17.09■□□□□ 0.33
SMAD6-201ENST00000288840 GOLGA8SH3BPF8 625 aa17.08■□□□□ 0.33
SMAD6-201ENST00000288840 MARK3P27448 753 aa17.08■□□□□ 0.33
SMAD6-201ENST00000288840 DAB2IPQ5VWQ8 1189 aa17.08■□□□□ 0.33
SMAD6-201ENST00000288840 RHOT2Q8IXI1 618 aa17.08■□□□□ 0.33
SMAD6-201ENST00000288840 LNX1Q8TBB1 728 aaPredicted RBP17.08■□□□□ 0.33
SMAD6-201ENST00000288840 CCDC77Q9BR77 488 aa17.08■□□□□ 0.33
SMAD6-201ENST00000288840 ZHX2Q9Y6X8 837 aa17.08■□□□□ 0.33
SMAD6-201ENST00000288840 POLD1P28340 1107 aa17.08■□□□□ 0.32
SMAD6-201ENST00000288840 LONRF1Q17RB8 773 aa17.08■□□□□ 0.32
SMAD6-201ENST00000288840 KIAA1755Q5JYT7 1200 aa17.08■□□□□ 0.32
SMAD6-201ENST00000288840 FMNL3Q8IVF7 1028 aa17.08■□□□□ 0.32
SMAD6-201ENST00000288840 PAGR1Q9BTK6 254 aa17.08■□□□□ 0.32
SMAD6-201ENST00000288840 NSRP1Q9H0G5 558 aaKnown RBP17.08■□□□□ 0.32
SMAD6-201ENST00000288840 VCPKMTQ9H867 229 aa17.08■□□□□ 0.32
SMAD6-201ENST00000288840 NKIRAS1Q9NYS0 192 aa17.08■□□□□ 0.32
SMAD6-201ENST00000288840 FRMD3A2A2Y4 597 aa17.08■□□□□ 0.32
SMAD6-201ENST00000288840 CAND2O75155 1236 aa17.08■□□□□ 0.32
SMAD6-201ENST00000288840 GUCY2CP25092 1073 aa17.08■□□□□ 0.32
SMAD6-201ENST00000288840 STX2P32856 288 aa17.08■□□□□ 0.32
SMAD6-201ENST00000288840 HIBCHQ6NVY1 386 aaPredicted RBP17.08■□□□□ 0.32
SMAD6-201ENST00000288840 CERKQ8TCT0 537 aa17.08■□□□□ 0.32
SMAD6-201ENST00000288840 POLR3CQ9BUI4 534 aaPredicted RBP17.08■□□□□ 0.32
SMAD6-201ENST00000288840 STRCP1A6NGW2 1772 aa17.08■□□□□ 0.32
SMAD6-201ENST00000288840 RASA3Q14644 834 aa17.07■□□□□ 0.32
SMAD6-201ENST00000288840 PHLDB3Q6NSJ2 640 aa17.07■□□□□ 0.32
SMAD6-201ENST00000288840 MCF2L2Q86YR7 1114 aa17.07■□□□□ 0.32
SMAD6-201ENST00000288840 ZSWIM2Q8NEG5 633 aa17.07■□□□□ 0.32
SMAD6-201ENST00000288840 GOLGA8MH3BSY2 632 aa17.07■□□□□ 0.32
SMAD6-201ENST00000288840 RPSAP08865 295 aaKnown RBP17.07■□□□□ 0.32
SMAD6-201ENST00000288840 RWDD2BP57060 319 aa17.07■□□□□ 0.32
SMAD6-201ENST00000288840 PTGISQ16647 500 aa17.07■□□□□ 0.32
SMAD6-201ENST00000288840 TMEM270Q6UE05 265 aa17.07■□□□□ 0.32
SMAD6-201ENST00000288840 NT5DC3Q86UY8 548 aa17.07■□□□□ 0.32
SMAD6-201ENST00000288840 SUPT20HQ8NEM7 779 aa17.07■□□□□ 0.32
SMAD6-201ENST00000288840 NEUROG2Q9H2A3 272 aa17.07■□□□□ 0.32
SMAD6-201ENST00000288840 TOGARAM1Q9Y4F4 1720 aa17.07■□□□□ 0.32
SMAD6-201ENST00000288840 MYO3BQ8WXR4 1341 aa17.07■□□□□ 0.32
SMAD6-201ENST00000288840 SLC16A3O15427 465 aaKnown RBP17.07■□□□□ 0.32
SMAD6-201ENST00000288840 EDIL3O43854 480 aa17.07■□□□□ 0.32
SMAD6-201ENST00000288840 ATF2P15336 505 aa17.07■□□□□ 0.32
SMAD6-201ENST00000288840 CLK2P49760 499 aaKnown RBP17.07■□□□□ 0.32
SMAD6-201ENST00000288840 RPS6P62753 249 aaKnown RBP17.07■□□□□ 0.32
SMAD6-201ENST00000288840 BAATQ14032 418 aaPredicted RBP17.07■□□□□ 0.32
SMAD6-201ENST00000288840 SNRNP35Q16560 246 aaKnown RBP17.07■□□□□ 0.32
SMAD6-201ENST00000288840 FAM47EQ6ZV65 393 aa17.07■□□□□ 0.32
SMAD6-201ENST00000288840 IL31RAQ8NI17 732 aa17.07■□□□□ 0.32
SMAD6-201ENST00000288840 MYCBPAPQ8TBZ2 947 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms