RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 C1orf186Q6ZWK4 172 aa22.64■■□□□ 1.22
RAB28-201ENST00000288723 MRPL10Q7Z7H8 261 aaKnown RBP22.64■■□□□ 1.22
RAB28-201ENST00000288723 THNSL1Q8IYQ7 743 aa22.64■■□□□ 1.22
RAB28-201ENST00000288723 SMG8Q8ND04 991 aaKnown RBP22.64■■□□□ 1.22
RAB28-201ENST00000288723 DEPTORQ8TB45 409 aa22.64■■□□□ 1.22
RAB28-201ENST00000288723 POF1BQ8WVV4 589 aa22.64■■□□□ 1.22
RAB28-201ENST00000288723 KIFAP3Q92845 792 aa22.64■■□□□ 1.22
RAB28-201ENST00000288723 PGBD4Q96DM1 585 aa22.64■■□□□ 1.22
RAB28-201ENST00000288723 USP28Q96RU2 1077 aa22.64■■□□□ 1.22
RAB28-201ENST00000288723 NT5C3AQ9H0P0 336 aa22.64■■□□□ 1.22
RAB28-201ENST00000288723 CSRNP2Q9H175 543 aa22.64■■□□□ 1.22
RAB28-201ENST00000288723 RNF39Q9H2S5 420 aa22.64■■□□□ 1.22
RAB28-201ENST00000288723 FGF18O76093 207 aa22.64■■□□□ 1.21
RAB28-201ENST00000288723 LAG3P18627 525 aa22.64■■□□□ 1.21
RAB28-201ENST00000288723 LONP1P36776 959 aaKnown RBP22.64■■□□□ 1.21
RAB28-201ENST00000288723 TMEM119Q4V9L6 283 aa22.64■■□□□ 1.21
RAB28-201ENST00000288723 KCNT2Q6UVM3 1135 aa22.64■■□□□ 1.21
RAB28-201ENST00000288723 GLB1LQ6UWU2 654 aa22.64■■□□□ 1.21
RAB28-201ENST00000288723 DAW1Q8N136 415 aa22.64■■□□□ 1.21
RAB28-201ENST00000288723 LRRC15Q8TF66 581 aa22.64■■□□□ 1.21
RAB28-201ENST00000288723 IFT74Q96LB3 600 aa22.64■■□□□ 1.21
RAB28-201ENST00000288723 LMAN2LQ9H0V9 348 aa22.64■■□□□ 1.21
RAB28-201ENST00000288723 FZD8Q9H461 694 aa22.64■■□□□ 1.21
RAB28-201ENST00000288723 ZSCAN16Q9H4T2 348 aaPredicted RBP22.64■■□□□ 1.21
RAB28-201ENST00000288723 IPPQ9Y573 584 aa22.64■■□□□ 1.21
RAB28-201ENST00000288723 SFI1A8K8P3 1242 aa22.63■■□□□ 1.21
RAB28-201ENST00000288723 PLA2G4BP0C869 781 aa22.63■■□□□ 1.21
RAB28-201ENST00000288723 IRS1P35568 1242 aa22.63■■□□□ 1.21
RAB28-201ENST00000288723 KARSQ15046 597 aaKnown RBP22.63■■□□□ 1.21
RAB28-201ENST00000288723 PPP2R5AQ15172 486 aa22.63■■□□□ 1.21
RAB28-201ENST00000288723 TIGD5Q53EQ6 642 aa22.63■■□□□ 1.21
RAB28-201ENST00000288723 NOMO2Q5JPE7 1267 aa22.63■■□□□ 1.21
RAB28-201ENST00000288723 USP49Q70CQ1 688 aa22.63■■□□□ 1.21
RAB28-201ENST00000288723 HLA-CQ95604 372 aa22.63■■□□□ 1.21
RAB28-201ENST00000288723 C2orf40Q9H1Z8 148 aa22.63■■□□□ 1.21
RAB28-201ENST00000288723 NSUN3Q9H649 340 aaKnown RBP22.63■■□□□ 1.21
RAB28-201ENST00000288723 PRMT7Q9NVM4 692 aaPredicted RBP22.63■■□□□ 1.21
RAB28-201ENST00000288723 PCDHGC5Q9Y5F6 944 aa22.63■■□□□ 1.21
RAB28-201ENST00000288723 EDN1P05305 212 aa22.62■■□□□ 1.21
RAB28-201ENST00000288723 NCLP19338 710 aaKnown RBP22.62■■□□□ 1.21
RAB28-201ENST00000288723 PEX3P56589 373 aa22.62■■□□□ 1.21
RAB28-201ENST00000288723 MAPK7Q13164 816 aa22.62■■□□□ 1.21
RAB28-201ENST00000288723 SYT2Q8N9I0 419 aaPredicted RBP22.62■■□□□ 1.21
RAB28-201ENST00000288723 ATXN2LQ8WWM7 1075 aaKnown RBP22.62■■□□□ 1.21
RAB28-201ENST00000288723 CALML4Q96GE6 196 aa22.62■■□□□ 1.21
RAB28-201ENST00000288723 EPSTI1Q96J88 318 aa22.62■■□□□ 1.21
RAB28-201ENST00000288723 CLIC6Q96NY7 704 aa22.62■■□□□ 1.21
RAB28-201ENST00000288723 APOL6Q9BWW8 343 aa22.62■■□□□ 1.21
RAB28-201ENST00000288723 MRPL9Q9BYD2 267 aaKnown RBP22.62■■□□□ 1.21
RAB28-201ENST00000288723 TBC1D13Q9NVG8 400 aa22.62■■□□□ 1.21
RAB28-201ENST00000288723 FBXO2Q9UK22 296 aaPredicted RBP22.62■■□□□ 1.21
RAB28-201ENST00000288723 A0A1B0GUA9 196 aa22.61■■□□□ 1.21
RAB28-201ENST00000288723 NT5C1B-RDH14C9J2C7 533 aa22.61■■□□□ 1.21
RAB28-201ENST00000288723 NPTXRO95502 500 aa22.61■■□□□ 1.21
RAB28-201ENST00000288723 SLC12A3P55017 1021 aa22.61■■□□□ 1.21
RAB28-201ENST00000288723 DHX8Q14562 1220 aaKnown RBP22.61■■□□□ 1.21
RAB28-201ENST00000288723 PPP4R3CPQ6ZMV5 832 aa22.61■■□□□ 1.21
RAB28-201ENST00000288723 RASSF8Q8NHQ8 419 aa22.61■■□□□ 1.21
RAB28-201ENST00000288723 CCDC51Q96ER9 411 aa22.61■■□□□ 1.21
RAB28-201ENST00000288723 ZNF558Q96NG5 402 aa22.61■■□□□ 1.21
RAB28-201ENST00000288723 CCDC113Q9H0I3 377 aa22.61■■□□□ 1.21
RAB28-201ENST00000288723 RSAD1Q9HA92 442 aa22.61■■□□□ 1.21
RAB28-201ENST00000288723 NPHP3-ACAD11A0A0J9YXS1 232 aa22.61■■□□□ 1.21
RAB28-201ENST00000288723 CCDC169A6NNP5 214 aa22.61■■□□□ 1.21
RAB28-201ENST00000288723 PRKCBP05771 671 aa22.61■■□□□ 1.21
RAB28-201ENST00000288723 ITGA4P13612 1032 aa22.61■■□□□ 1.21
RAB28-201ENST00000288723 MRPS5P82675 430 aaKnown RBP22.61■■□□□ 1.21
RAB28-201ENST00000288723 MAPK6Q16659 721 aa22.61■■□□□ 1.21
RAB28-201ENST00000288723 ASB2Q96Q27 587 aa22.61■■□□□ 1.21
RAB28-201ENST00000288723 TRIM6Q9C030 488 aaPredicted RBP22.61■■□□□ 1.21
RAB28-201ENST00000288723 GBP3Q9H0R5 595 aa22.61■■□□□ 1.21
RAB28-201ENST00000288723 NXF3Q9H4D5 531 aaKnown RBP22.61■■□□□ 1.21
RAB28-201ENST00000288723 PLXNA4Q9HCM2 1894 aa22.6■■□□□ 1.21
RAB28-201ENST00000288723 ZC3H11AO75152 810 aaKnown RBP eCLIP22.6■■□□□ 1.21
RAB28-201ENST00000288723 PLCG1P19174 1290 aa22.6■■□□□ 1.21
RAB28-201ENST00000288723 GTF2F1P35269 517 aaKnown RBP eCLIP22.6■■□□□ 1.21
RAB28-201ENST00000288723 NPTX2P47972 431 aa22.6■■□□□ 1.21
RAB28-201ENST00000288723 BCAR1P56945 870 aa22.6■■□□□ 1.21
RAB28-201ENST00000288723 CACNB1Q02641 598 aaPredicted RBP22.6■■□□□ 1.21
RAB28-201ENST00000288723 RNASELQ05823 741 aaKnown RBP22.6■■□□□ 1.21
RAB28-201ENST00000288723 PRPF4BQ13523 1007 aaKnown RBP22.6■■□□□ 1.21
RAB28-201ENST00000288723 FAM187BQ17R55 369 aa22.6■■□□□ 1.21
RAB28-201ENST00000288723 TMEM132AQ24JP5 1023 aa22.6■■□□□ 1.21
RAB28-201ENST00000288723 FOXD4L6Q3SYB3 417 aaPredicted RBP22.6■■□□□ 1.21
RAB28-201ENST00000288723 SLC27A1Q6PCB7 646 aa22.6■■□□□ 1.21
RAB28-201ENST00000288723 FOXD4L3Q6VB84 417 aaPredicted RBP22.6■■□□□ 1.21
RAB28-201ENST00000288723 ZNF280BQ86YH2 543 aa22.6■■□□□ 1.21
RAB28-201ENST00000288723 PRIMPOLQ96LW4 560 aa22.6■■□□□ 1.21
RAB28-201ENST00000288723 NRDE2Q9H7Z3 1164 aa22.6■■□□□ 1.21
RAB28-201ENST00000288723 TFIP11Q9UBB9 837 aaKnown RBP22.6■■□□□ 1.21
RAB28-201ENST00000288723 SRPRBQ9Y5M8 271 aaKnown RBP22.6■■□□□ 1.21
RAB28-201ENST00000288723 ATG2AQ2TAZ0 1938 aa22.6■■□□□ 1.21
RAB28-201ENST00000288723 CNTNAP2Q9UHC6 1331 aa22.59■■□□□ 1.21
RAB28-201ENST00000288723 B4GALT3O60512 393 aa22.59■■□□□ 1.21
RAB28-201ENST00000288723 POMCP01189 267 aa22.59■■□□□ 1.21
RAB28-201ENST00000288723 GUCY2CP25092 1073 aa22.59■■□□□ 1.21
RAB28-201ENST00000288723 KCNQ1P51787 676 aa22.59■■□□□ 1.21
RAB28-201ENST00000288723 PKP1Q13835 747 aa22.59■■□□□ 1.21
RAB28-201ENST00000288723 ARSHQ5FYA8 562 aa22.59■■□□□ 1.21
RAB28-201ENST00000288723 EP400NLQ6ZTU2 488 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms