RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 NR1I2O75469 434 aa15.65■□□□□ 0.1
TPM1-202ENST00000288398 OFD1O75665 1012 aa15.65■□□□□ 0.1
TPM1-202ENST00000288398 ALDH2P05091 517 aa15.65■□□□□ 0.1
TPM1-202ENST00000288398 GALTP07902 379 aa15.65■□□□□ 0.1
TPM1-202ENST00000288398 CTSAP10619 480 aa15.65■□□□□ 0.1
TPM1-202ENST00000288398 ITGA4P13612 1032 aa15.65■□□□□ 0.1
TPM1-202ENST00000288398 SIGLEC14Q08ET2 396 aa15.65■□□□□ 0.1
TPM1-202ENST00000288398 KCNC3Q14003 757 aa15.65■□□□□ 0.1
TPM1-202ENST00000288398 PCBP1Q15365 356 aaKnown RBP eCLIP15.65■□□□□ 0.14e-6■□□□□ 10.4
TPM1-202ENST00000288398 ATAT1Q5SQI0 421 aa15.65■□□□□ 0.1
TPM1-202ENST00000288398 RARS2Q5T160 578 aaKnown RBP15.65■□□□□ 0.1
TPM1-202ENST00000288398 ELMSAN1Q6PJG2 1045 aa15.65■□□□□ 0.1
TPM1-202ENST00000288398 BMP8AQ7Z5Y6 402 aa15.65■□□□□ 0.1
TPM1-202ENST00000288398 CABP7Q86V35 215 aa15.65■□□□□ 0.1
TPM1-202ENST00000288398 ALYREFQ86V81 257 aaKnown RBP15.65■□□□□ 0.1
TPM1-202ENST00000288398 HAS1Q92839 578 aa15.65■□□□□ 0.1
TPM1-202ENST00000288398 TRIM6Q9C030 488 aaPredicted RBP15.65■□□□□ 0.1
TPM1-202ENST00000288398 ZBP1Q9H171 429 aa15.65■□□□□ 0.1
TPM1-202ENST00000288398 NRDE2Q9H7Z3 1164 aa15.65■□□□□ 0.1
TPM1-202ENST00000288398 INO80B-WBP1J3KQ70 363 aa15.64■□□□□ 0.09
TPM1-202ENST00000288398 NEMFO60524 1076 aa15.64■□□□□ 0.09
TPM1-202ENST00000288398 AXLP30530 894 aa15.64■□□□□ 0.09
TPM1-202ENST00000288398 SLC11A1P49279 550 aa15.64■□□□□ 0.09
TPM1-202ENST00000288398 NR5A1Q13285 461 aa15.64■□□□□ 0.09
TPM1-202ENST00000288398 SAFBQ15424 915 aaKnown RBP eCLIP15.64■□□□□ 0.09
TPM1-202ENST00000288398 NOTUMQ6P988 496 aa15.64■□□□□ 0.09
TPM1-202ENST00000288398 FERMT3Q86UX7 667 aa15.64■□□□□ 0.09
TPM1-202ENST00000288398 NECAB1Q8N987 351 aa15.64■□□□□ 0.09
TPM1-202ENST00000288398 ZNF579Q8NAF0 562 aaKnown RBP15.64■□□□□ 0.09
TPM1-202ENST00000288398 TDRD5Q8NAT2 981 aaKnown RBP15.64■□□□□ 0.09
TPM1-202ENST00000288398 AUTS2Q8WXX7 1259 aa15.64■□□□□ 0.09
TPM1-202ENST00000288398 GTF3C6Q969F1 213 aa15.64■□□□□ 0.09
TPM1-202ENST00000288398 CCDC51Q96ER9 411 aa15.64■□□□□ 0.09
TPM1-202ENST00000288398 TMEM175Q9BSA9 504 aa15.64■□□□□ 0.09
TPM1-202ENST00000288398 WRAP73Q9P2S5 460 aaPredicted RBP15.64■□□□□ 0.09
TPM1-202ENST00000288398 DBR1Q9UK59 544 aaKnown RBP15.64■□□□□ 0.09
TPM1-202ENST00000288398 FAN1Q9Y2M0 1017 aa15.64■□□□□ 0.09
TPM1-202ENST00000288398 SSBP05455 408 aaKnown RBP eCLIP15.63■□□□□ 0.09
TPM1-202ENST00000288398 KLRC2P26717 231 aa15.63■□□□□ 0.09
TPM1-202ENST00000288398 TXKP42681 527 aa15.63■□□□□ 0.09
TPM1-202ENST00000288398 FOSBP53539 338 aa15.63■□□□□ 0.09
TPM1-202ENST00000288398 PTPN5P54829 565 aa15.63■□□□□ 0.09
TPM1-202ENST00000288398 NHLH1Q02575 133 aa15.63■□□□□ 0.09
TPM1-202ENST00000288398 MTMR3Q13615 1198 aa15.63■□□□□ 0.09
TPM1-202ENST00000288398 TMEM173Q86WV6 379 aaPredicted RBP15.63■□□□□ 0.09
TPM1-202ENST00000288398 FBXL6Q8N531 539 aa15.63■□□□□ 0.09
TPM1-202ENST00000288398 EIF2AK1Q9BQI3 630 aaKnown RBP15.63■□□□□ 0.09
TPM1-202ENST00000288398 MRPL17Q9NRX2 175 aaKnown RBP15.63■□□□□ 0.09
TPM1-202ENST00000288398 PPP4R2Q9NY27 417 aa15.63■□□□□ 0.09
TPM1-202ENST00000288398 DNAJB4Q9UDY4 337 aa15.63■□□□□ 0.09
TPM1-202ENST00000288398 SSX2IPQ9Y2D8 614 aa15.63■□□□□ 0.09
TPM1-202ENST00000288398 IRAK3Q9Y616 596 aa15.63■□□□□ 0.09
TPM1-202ENST00000288398 MEIS3P2A8K0S8 358 aa15.62■□□□□ 0.09
TPM1-202ENST00000288398 DTNBO60941 627 aa15.62■□□□□ 0.09
TPM1-202ENST00000288398 DGAT1O75907 488 aa15.62■□□□□ 0.09
TPM1-202ENST00000288398 CTDNEP1O95476 244 aa15.62■□□□□ 0.09
TPM1-202ENST00000288398 POMCP01189 267 aa15.62■□□□□ 0.09
TPM1-202ENST00000288398 URODP06132 367 aa15.62■□□□□ 0.09
TPM1-202ENST00000288398 NCLP19338 710 aaKnown RBP15.62■□□□□ 0.09
TPM1-202ENST00000288398 OR1G1P47890 313 aa15.62■□□□□ 0.09
TPM1-202ENST00000288398 NEK4P51957 841 aa15.62■□□□□ 0.09
TPM1-202ENST00000288398 AGMOQ6ZNB7 445 aa15.62■□□□□ 0.09
TPM1-202ENST00000288398 MRPL10Q7Z7H8 261 aaKnown RBP15.62■□□□□ 0.09
TPM1-202ENST00000288398 DIS3L2Q8IYB7 885 aaKnown RBP15.62■□□□□ 0.09
TPM1-202ENST00000288398 POMKQ9H5K3 350 aa15.62■□□□□ 0.09
TPM1-202ENST00000288398 TTC12Q9H892 705 aaPredicted RBP15.62■□□□□ 0.09
TPM1-202ENST00000288398 MINDY3Q9H8M7 445 aa15.62■□□□□ 0.09
TPM1-202ENST00000288398 ANKEF1Q9NU02 776 aa15.62■□□□□ 0.09
TPM1-202ENST00000288398 FAM205CA6NFA0 338 aa15.61■□□□□ 0.09
TPM1-202ENST00000288398 SLITRK3O94933 977 aa15.61■□□□□ 0.09
TPM1-202ENST00000288398 EPCAMP16422 314 aa15.61■□□□□ 0.09
TPM1-202ENST00000288398 MRE11P49959 708 aa15.61■□□□□ 0.09
TPM1-202ENST00000288398 PTPN14Q15678 1187 aa15.61■□□□□ 0.09
TPM1-202ENST00000288398 ME3Q16798 604 aa15.61■□□□□ 0.09
TPM1-202ENST00000288398 TMEM132AQ24JP5 1023 aa15.61■□□□□ 0.09
TPM1-202ENST00000288398 EARS2Q5JPH6 523 aaKnown RBP15.61■□□□□ 0.09
TPM1-202ENST00000288398 KIAA1841Q6NSI8 718 aa15.61■□□□□ 0.09
TPM1-202ENST00000288398 ZNF280BQ86YH2 543 aa15.61■□□□□ 0.09
TPM1-202ENST00000288398 UBALD2Q8IYN6 164 aa15.61■□□□□ 0.09
TPM1-202ENST00000288398 PLCD3Q8N3E9 789 aa15.61■□□□□ 0.09
TPM1-202ENST00000288398 C12orf76Q8N812 135 aaPredicted RBP15.61■□□□□ 0.09
TPM1-202ENST00000288398 KREMEN2Q8NCW0 462 aa15.61■□□□□ 0.09
TPM1-202ENST00000288398 ACSF2Q96CM8 615 aaPredicted RBP15.61■□□□□ 0.09
TPM1-202ENST00000288398 APOL6Q9BWW8 343 aa15.61■□□□□ 0.09
TPM1-202ENST00000288398 SFXN1Q9H9B4 322 aa15.61■□□□□ 0.09
TPM1-202ENST00000288398 DPP7Q9UHL4 492 aa15.61■□□□□ 0.09
TPM1-202ENST00000288398 SORCS3Q9UPU3 1222 aa15.61■□□□□ 0.09
TPM1-202ENST00000288398 PRG3Q9Y2Y8 225 aaPredicted RBP15.61■□□□□ 0.09
TPM1-202ENST00000288398 BTBD18B2RXH4 712 aa15.6■□□□□ 0.09
TPM1-202ENST00000288398 C2CD4DB7Z1M9 353 aa15.6■□□□□ 0.09
TPM1-202ENST00000288398 C2CD2LO14523 706 aa15.6■□□□□ 0.09
TPM1-202ENST00000288398 ZBTB39O15060 712 aa15.6■□□□□ 0.09
TPM1-202ENST00000288398 TSPAN1O60635 241 aa15.6■□□□□ 0.09
TPM1-202ENST00000288398 LYPLA2O95372 231 aa15.6■□□□□ 0.09
TPM1-202ENST00000288398 WEE2P0C1S8 567 aa15.6■□□□□ 0.09
TPM1-202ENST00000288398 ATP2B1P20020 1258 aa15.6■□□□□ 0.09
TPM1-202ENST00000288398 HOXA11P31270 313 aaPredicted RBP15.6■□□□□ 0.09
TPM1-202ENST00000288398 PTENP60484 403 aa15.6■□□□□ 0.09
TPM1-202ENST00000288398 SPIRE1Q08AE8 756 aa15.6■□□□□ 0.09
TPM1-202ENST00000288398 GNL2Q13823 731 aaKnown RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms