RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 GLI1P08151 1106 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 RAD23BP54727 409 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 MTMR1Q13613 665 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 NAB2Q15742 525 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 MUM1L1Q5H9M0 696 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 WDR93Q6P2C0 686 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 ST13P4Q8IZP2 240 aaPredicted RBP13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 SCFD1Q8WVM8 642 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 NLRP7Q8WX94 980 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 PPP1R16BQ96T49 567 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 EDEM3Q9BZQ6 932 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 VIPAS39Q9H9C1 493 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 IFT122Q9HBG6 1241 aa13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 REXO2Q9Y3B8 237 aaKnown RBP13.43□□□□□ -0.26
SLC6A1-201ENST00000287766 CYP26A1O43174 497 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 MGEA5O60502 916 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 PPP1R37O75864 691 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 EYA4O95677 639 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 MYBL2P10244 700 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 VAMP7P51809 220 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 CORO7P57737 925 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 ZBTB33Q86T24 672 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 SPATA20Q8TB22 786 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 PLEKHG2Q9H7P9 1386 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 CNTNAP4Q9C0A0 1308 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 CRCPO75575 148 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 EPC2Q52LR7 807 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 CEP55Q53EZ4 464 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 MAIP1Q8WWC4 291 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 CCT6BQ92526 530 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 ELMO3Q96BJ8 720 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 RMDN3Q96TC7 470 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 FAM118BQ9BPY3 351 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 CD248Q9HCU0 757 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 RAB20Q9NX57 234 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 FGFR4P22455 802 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 ECE1P42892 770 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 KCNJ1P48048 391 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 KLHDC7AQ5VTJ3 777 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 SCYL2Q6P3W7 929 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 SCARA5Q6ZMJ2 495 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 GJD4Q96KN9 370 aaPredicted RBP13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 FAM213AQ9BRX8 229 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 CENPKQ9BS16 269 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 AZI2Q9H6S1 392 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 ZNF277Q9NRM2 450 aaPredicted RBP13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 STOML1Q9UBI4 398 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 LCMT1Q9UIC8 334 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 ANAPC5Q9UJX4 755 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 TTC7AQ9ULT0 858 aaPredicted RBP13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 ESYT2A0FGR8 921 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 IGBP1P78318 339 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 MMGT1Q8N4V1 131 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 TRIML2Q8N7C3 387 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 CCT8L2Q96SF2 557 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 THEGQ9P2T0 379 aa13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 NXF1Q9UBU9 619 aaKnown RBP13.42□□□□□ -0.26
SLC6A1-201ENST00000287766 DDTLA6NHG4 134 aaPredicted RBP13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 DKC1O60832 514 aaKnown RBP eCLIP13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 GPC5P78333 572 aa13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 LDHDQ86WU2 507 aa13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 ZFPM1Q8IX07 1006 aa13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 RSAD2Q8WXG1 361 aa13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 TNFRSF25Q93038 417 aa13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 NAGPAQ9UK23 515 aa13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 RAB21Q9UL25 225 aa13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 G3BP2Q9UN86 482 aaKnown RBP13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 DENND3A2RUS2 1198 aa13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 RASSF10A6NK89 507 aa13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 ZBTB39O15060 712 aa13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 DNAJC6O75061 913 aa13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 AKAP3O75969 853 aa13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 FMO5P49326 533 aa13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 BFSP1Q12934 665 aa13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 BRDTQ58F21 947 aaPredicted RBP13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 KRT80Q6KB66 452 aa13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 CYFIP1Q7L576 1253 aa13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 CASKIN2Q8WXE0 1202 aa13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 RFFLQ8WZ73 363 aa13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 NUP85Q9BW27 656 aa13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 KCNQ5Q9NR82 932 aa13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 GEMIN8Q9NWZ8 242 aaKnown RBP13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 MSH4O15457 936 aa13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 PHBP35232 272 aa13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 SATB1Q01826 763 aa13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 USP38Q8NB14 1042 aa13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 ACER1Q8TDN7 264 aa13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 ZNF384Q8TF68 577 aa13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 TTC1Q99614 292 aa13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 C11orf70Q9BRQ4 267 aa13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 RIOX1Q9H6W3 641 aa13.41□□□□□ -0.26
SLC6A1-201ENST00000287766 A0A0G2JND7 137 aa13.4□□□□□ -0.26
SLC6A1-201ENST00000287766 GYG2O15488 501 aa13.4□□□□□ -0.26
SLC6A1-201ENST00000287766 RPA1P27694 616 aa13.4□□□□□ -0.26
SLC6A1-201ENST00000287766 RWDD2BP57060 319 aa13.4□□□□□ -0.26
SLC6A1-201ENST00000287766 SEMA3FQ13275 785 aa13.4□□□□□ -0.26
SLC6A1-201ENST00000287766 RNF25Q96BH1 459 aaPredicted RBP13.4□□□□□ -0.26
SLC6A1-201ENST00000287766 MAPK13O15264 365 aa13.4□□□□□ -0.26
SLC6A1-201ENST00000287766 EIF3HO15372 352 aaKnown RBP eCLIP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms