RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 PCNTO95613 3336 aa19.85■□□□□ 0.77
PDLIM3-201ENST00000284767 KIAA1217Q5T5P2 1943 aa19.85■□□□□ 0.77
PDLIM3-201ENST00000284767 BTNL10A8MVZ5 291 aa19.85■□□□□ 0.77
PDLIM3-201ENST00000284767 TISP43B9A030 160 aa19.85■□□□□ 0.77
PDLIM3-201ENST00000284767 TCERG1LQ5VWI1 586 aa19.85■□□□□ 0.77
PDLIM3-201ENST00000284767 ARFGAP2Q8N6H7 521 aa19.85■□□□□ 0.77
PDLIM3-201ENST00000284767 SAMD3Q8N6K7 520 aa19.85■□□□□ 0.77
PDLIM3-201ENST00000284767 NEK9Q8TD19 979 aa19.85■□□□□ 0.77
PDLIM3-201ENST00000284767 TAF1DQ9H5J8 278 aaPredicted RBP19.85■□□□□ 0.77
PDLIM3-201ENST00000284767 PLCB1Q9NQ66 1216 aa19.85■□□□□ 0.77
PDLIM3-201ENST00000284767 TCEAL9Q9UHQ7 104 aa19.85■□□□□ 0.77
PDLIM3-201ENST00000284767 PTPRFP10586 1907 aa19.85■□□□□ 0.77
PDLIM3-201ENST00000284767 POLR2FP61218 127 aaKnown RBP19.85■□□□□ 0.77
PDLIM3-201ENST00000284767 NLRP14Q86W24 1093 aa19.85■□□□□ 0.77
PDLIM3-201ENST00000284767 CABS1Q96KC9 395 aa19.85■□□□□ 0.77
PDLIM3-201ENST00000284767 ISCUQ9H1K1 167 aa19.85■□□□□ 0.77
PDLIM3-201ENST00000284767 AIPL1Q9NZN9 384 aa19.85■□□□□ 0.77
PDLIM3-201ENST00000284767 PNMA2Q9UL42 364 aa19.85■□□□□ 0.77
PDLIM3-201ENST00000284767 ODF2LQ9ULJ1 636 aa19.85■□□□□ 0.77
PDLIM3-201ENST00000284767 GOLGA6L10A6NI86 522 aa19.84■□□□□ 0.77
PDLIM3-201ENST00000284767 ATP2A1O14983 1001 aa19.84■□□□□ 0.77
PDLIM3-201ENST00000284767 MNAT1P51948 309 aa19.84■□□□□ 0.77
PDLIM3-201ENST00000284767 TAF4BQ92750 862 aa19.84■□□□□ 0.77
PDLIM3-201ENST00000284767 TMBIM4Q9HC24 238 aa19.84■□□□□ 0.77
PDLIM3-201ENST00000284767 H0YHG0 523 aa19.84■□□□□ 0.77
PDLIM3-201ENST00000284767 RAD51CO43502 376 aa19.84■□□□□ 0.77
PDLIM3-201ENST00000284767 FAM107AO95990 144 aa19.84■□□□□ 0.77
PDLIM3-201ENST00000284767 SLC9A1P19634 815 aa19.84■□□□□ 0.77
PDLIM3-201ENST00000284767 CUL1Q13616 776 aa19.84■□□□□ 0.77
PDLIM3-201ENST00000284767 TTLL12Q14166 644 aaPredicted RBP19.84■□□□□ 0.77
PDLIM3-201ENST00000284767 KIAA0753Q2KHM9 967 aa19.84■□□□□ 0.77
PDLIM3-201ENST00000284767 C10orf76Q5T2E6 689 aa19.84■□□□□ 0.77
PDLIM3-201ENST00000284767 NLRX1Q86UT6 975 aa19.84■□□□□ 0.77
PDLIM3-201ENST00000284767 MYCBPAPQ8TBZ2 947 aa19.84■□□□□ 0.77
PDLIM3-201ENST00000284767 CCT8L2Q96SF2 557 aa19.84■□□□□ 0.77
PDLIM3-201ENST00000284767 MYCBPQ99417 103 aaPredicted RBP19.84■□□□□ 0.77
PDLIM3-201ENST00000284767 PLAAQ9Y263 795 aa19.84■□□□□ 0.77
PDLIM3-201ENST00000284767 WDR64B1ANS9 1081 aa19.83■□□□□ 0.77
PDLIM3-201ENST00000284767 EIF3DO15371 548 aaKnown RBP eCLIP19.83■□□□□ 0.77
PDLIM3-201ENST00000284767 KCNA2P16389 499 aa19.83■□□□□ 0.77
PDLIM3-201ENST00000284767 CYP2J2P51589 502 aa19.83■□□□□ 0.77
PDLIM3-201ENST00000284767 SOX10P56693 466 aa19.83■□□□□ 0.77
PDLIM3-201ENST00000284767 RBM46Q8TBY0 533 aaKnown RBP19.83■□□□□ 0.77
PDLIM3-201ENST00000284767 K7ENM7 598 aa19.83■□□□□ 0.76
PDLIM3-201ENST00000284767 DNA2P51530 1060 aa19.83■□□□□ 0.76
PDLIM3-201ENST00000284767 PLCB4Q15147 1175 aa19.83■□□□□ 0.76
PDLIM3-201ENST00000284767 CEP85LQ5SZL2 805 aa19.83■□□□□ 0.76
PDLIM3-201ENST00000284767 MAATS1Q7Z4T9 603 aa19.83■□□□□ 0.76
PDLIM3-201ENST00000284767 FRMD5Q7Z6J6 570 aa19.83■□□□□ 0.76
PDLIM3-201ENST00000284767 C3orf20Q8ND61 904 aa19.83■□□□□ 0.76
PDLIM3-201ENST00000284767 CDCA5Q96FF9 252 aa19.83■□□□□ 0.76
PDLIM3-201ENST00000284767 KCND2Q9NZV8 630 aa19.83■□□□□ 0.76
PDLIM3-201ENST00000284767 LCTP09848 1927 aa19.82■□□□□ 0.76
PDLIM3-201ENST00000284767 A0A087X0T9 212 aa19.82■□□□□ 0.76
PDLIM3-201ENST00000284767 FAM228BP0C875 321 aa19.82■□□□□ 0.76
PDLIM3-201ENST00000284767 SP2Q02086 613 aa19.82■□□□□ 0.76
PDLIM3-201ENST00000284767 KLHL30Q0D2K2 578 aa19.82■□□□□ 0.76
PDLIM3-201ENST00000284767 RAPGEF1Q13905 1077 aa19.82■□□□□ 0.76
PDLIM3-201ENST00000284767 ENOX2Q16206 610 aaKnown RBP19.82■□□□□ 0.76
PDLIM3-201ENST00000284767 XKR9Q5GH70 373 aa19.82■□□□□ 0.76
PDLIM3-201ENST00000284767 ANO5Q75V66 913 aa19.82■□□□□ 0.76
PDLIM3-201ENST00000284767 ANKRD35Q8N283 1001 aa19.82■□□□□ 0.76
PDLIM3-201ENST00000284767 RDH13Q8NBN7 331 aa19.82■□□□□ 0.76
PDLIM3-201ENST00000284767 PBKQ96KB5 322 aa19.82■□□□□ 0.76
PDLIM3-201ENST00000284767 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.82■□□□□ 0.76
PDLIM3-201ENST00000284767 GABBR1Q9UBS5 961 aa19.82■□□□□ 0.76
PDLIM3-201ENST00000284767 ZNF862O60290 1169 aa19.82■□□□□ 0.76
PDLIM3-201ENST00000284767 XRCC5P13010 732 aaKnown RBP19.82■□□□□ 0.76
PDLIM3-201ENST00000284767 PSMC5P62195 406 aa19.82■□□□□ 0.76
PDLIM3-201ENST00000284767 KRT76Q01546 638 aa19.82■□□□□ 0.76
PDLIM3-201ENST00000284767 ARID5AQ03989 594 aa19.82■□□□□ 0.76
PDLIM3-201ENST00000284767 DRP2Q13474 957 aa19.82■□□□□ 0.76
PDLIM3-201ENST00000284767 RPS6KA1Q15418 735 aa19.82■□□□□ 0.76
PDLIM3-201ENST00000284767 ASIC2Q16515 512 aa19.82■□□□□ 0.76
PDLIM3-201ENST00000284767 LBX2Q6XYB7 198 aa19.82■□□□□ 0.76
PDLIM3-201ENST00000284767 SLC35C1Q96A29 364 aa19.82■□□□□ 0.76
PDLIM3-201ENST00000284767 LRRC45Q96CN5 670 aa19.82■□□□□ 0.76
PDLIM3-201ENST00000284767 GPRASP2Q96D09 838 aa19.82■□□□□ 0.76
PDLIM3-201ENST00000284767 SEL1LQ9UBV2 794 aa19.82■□□□□ 0.76
PDLIM3-201ENST00000284767 DBR1Q9UK59 544 aaKnown RBP19.82■□□□□ 0.76
PDLIM3-201ENST00000284767 IFI16Q16666 785 aaKnown RBP19.81■□□□□ 0.76
PDLIM3-201ENST00000284767 MOV10L1Q9BXT6 1211 aaKnown RBP19.81■□□□□ 0.76
PDLIM3-201ENST00000284767 AGPAT3Q9NRZ7 376 aa19.81■□□□□ 0.76
PDLIM3-201ENST00000284767 PACSIN2Q9UNF0 486 aaPredicted RBP19.81■□□□□ 0.76
PDLIM3-201ENST00000284767 AFPP02771 609 aaKnown RBP19.81■□□□□ 0.76
PDLIM3-201ENST00000284767 MYZAPP0CAP1 466 aa19.81■□□□□ 0.76
PDLIM3-201ENST00000284767 RPL13P26373 211 aaKnown RBP19.81■□□□□ 0.76
PDLIM3-201ENST00000284767 IREB2P48200 963 aaKnown RBP19.81■□□□□ 0.76
PDLIM3-201ENST00000284767 JAK3P52333 1124 aa19.81■□□□□ 0.76
PDLIM3-201ENST00000284767 C4orf19Q8IY42 314 aa19.81■□□□□ 0.76
PDLIM3-201ENST00000284767 ACTRT1Q8TDG2 376 aa19.81■□□□□ 0.76
PDLIM3-201ENST00000284767 CALR3Q96L12 384 aaKnown RBP19.81■□□□□ 0.76
PDLIM3-201ENST00000284767 KIFC3Q9BVG8 833 aa19.81■□□□□ 0.76
PDLIM3-201ENST00000284767 ADAMTS1Q9UHI8 967 aa19.81■□□□□ 0.76
PDLIM3-201ENST00000284767 GSCP56915 257 aaPredicted RBP19.8■□□□□ 0.76
PDLIM3-201ENST00000284767 EAPPQ56P03 285 aaPredicted RBP19.8■□□□□ 0.76
PDLIM3-201ENST00000284767 SWSAP1Q6NVH7 229 aa19.8■□□□□ 0.76
PDLIM3-201ENST00000284767 KLHL7Q8IXQ5 586 aa19.8■□□□□ 0.76
PDLIM3-201ENST00000284767 SYCP3Q8IZU3 236 aa19.8■□□□□ 0.76
PDLIM3-201ENST00000284767 ZSWIM2Q8NEG5 633 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms