RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 PPP4R3CPQ6ZMV5 832 aa12.8□□□□□ -0.36
SSRP1-201ENST00000278412 DEPTORQ8TB45 409 aa12.8□□□□□ -0.36
SSRP1-201ENST00000278412 IFT74Q96LB3 600 aa12.8□□□□□ -0.36
SSRP1-201ENST00000278412 ERGIC2Q96RQ1 377 aa12.8□□□□□ -0.36
SSRP1-201ENST00000278412 FAM213AQ9BRX8 229 aa12.8□□□□□ -0.36
SSRP1-201ENST00000278412 GTPBP4Q9BZE4 634 aaKnown RBP12.8□□□□□ -0.36
SSRP1-201ENST00000278412 FAM49AQ9H0Q0 323 aaPredicted RBP12.8□□□□□ -0.36
SSRP1-201ENST00000278412 CDHR5Q9HBB8 845 aa12.8□□□□□ -0.36
SSRP1-201ENST00000278412 EPB41P11171 864 aaKnown RBP12.8□□□□□ -0.36
SSRP1-201ENST00000278412 MARSP56192 900 aaKnown RBP12.8□□□□□ -0.36
SSRP1-201ENST00000278412 ARID5AQ03989 594 aa12.8□□□□□ -0.36
SSRP1-201ENST00000278412 KIAA0753Q2KHM9 967 aa12.8□□□□□ -0.36
SSRP1-201ENST00000278412 FKBP15Q5T1M5 1219 aa12.8□□□□□ -0.36
SSRP1-201ENST00000278412 MTERF4Q7Z6M4 381 aaKnown RBP12.8□□□□□ -0.36
SSRP1-201ENST00000278412 CEP120Q8N960 986 aa12.8□□□□□ -0.36
SSRP1-201ENST00000278412 LMBR1Q8WVP7 490 aa12.8□□□□□ -0.36
SSRP1-201ENST00000278412 SPIRE2Q8WWL2 714 aa12.8□□□□□ -0.36
SSRP1-201ENST00000278412 POMGNT1Q8WZA1 660 aa12.8□□□□□ -0.36
SSRP1-201ENST00000278412 PTPRJQ12913 1337 aa12.79□□□□□ -0.36
SSRP1-201ENST00000278412 ITIH6Q6UXX5 1313 aa12.79□□□□□ -0.36
SSRP1-201ENST00000278412 IGKV6-21A0A0C4DH24 114 aa12.79□□□□□ -0.36
SSRP1-201ENST00000278412 A0A1W2PQC6 194 aa12.79□□□□□ -0.36
SSRP1-201ENST00000278412 ZNF500O60304 480 aaPredicted RBP12.79□□□□□ -0.36
SSRP1-201ENST00000278412 MYL3P08590 195 aa12.79□□□□□ -0.36
SSRP1-201ENST00000278412 PSMC2P35998 433 aaKnown RBP12.79□□□□□ -0.36
SSRP1-201ENST00000278412 TNFSF9P41273 254 aa12.79□□□□□ -0.36
SSRP1-201ENST00000278412 POLR2FP61218 127 aaKnown RBP12.79□□□□□ -0.36
SSRP1-201ENST00000278412 OSTNP61366 133 aa12.79□□□□□ -0.36
SSRP1-201ENST00000278412 IQSEC1Q6DN90 963 aa12.79□□□□□ -0.36
SSRP1-201ENST00000278412 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.79□□□□□ -0.36
SSRP1-201ENST00000278412 RUFY4Q6ZNE9 571 aa12.79□□□□□ -0.36
SSRP1-201ENST00000278412 EMID1Q96A84 441 aaPredicted RBP12.79□□□□□ -0.36
SSRP1-201ENST00000278412 HHIPL1Q96JK4 782 aa12.79□□□□□ -0.36
SSRP1-201ENST00000278412 IRX2Q9BZI1 471 aaPredicted RBP12.79□□□□□ -0.36
SSRP1-201ENST00000278412 RNF19AQ9NV58 838 aa12.79□□□□□ -0.36
SSRP1-201ENST00000278412 PCDH10Q9P2E7 1040 aa12.79□□□□□ -0.36
SSRP1-201ENST00000278412 A0A087WZ62 844 aa12.79□□□□□ -0.36
SSRP1-201ENST00000278412 LRRC53A6NM62 1247 aa12.79□□□□□ -0.36
SSRP1-201ENST00000278412 K7ERI5 159 aa12.79□□□□□ -0.36
SSRP1-201ENST00000278412 FANCGO15287 622 aa12.79□□□□□ -0.36
SSRP1-201ENST00000278412 PPFIA4O75335 1185 aa12.79□□□□□ -0.36
SSRP1-201ENST00000278412 FCGRTP55899 365 aa12.79□□□□□ -0.36
SSRP1-201ENST00000278412 CACNB2Q08289 660 aaPredicted RBP12.79□□□□□ -0.36
SSRP1-201ENST00000278412 PPFIA1Q13136 1202 aa12.79□□□□□ -0.36
SSRP1-201ENST00000278412 FRMD5Q7Z6J6 570 aa12.79□□□□□ -0.36
SSRP1-201ENST00000278412 TMEM192Q8IY95 271 aa12.79□□□□□ -0.36
SSRP1-201ENST00000278412 FDXACB1Q9BRP7 624 aaPredicted RBP12.79□□□□□ -0.36
SSRP1-201ENST00000278412 ST6GALNAC4Q9H4F1 302 aa12.79□□□□□ -0.36
SSRP1-201ENST00000278412 FHOD1Q9Y613 1164 aa12.79□□□□□ -0.36
SSRP1-201ENST00000278412 HBP1O60381 514 aa12.78□□□□□ -0.36
SSRP1-201ENST00000278412 FGFR1OPO95684 399 aaKnown RBP12.78□□□□□ -0.36
SSRP1-201ENST00000278412 C6orf222P0C671 652 aaPredicted RBP12.78□□□□□ -0.36
SSRP1-201ENST00000278412 DLATP10515 647 aaKnown RBP12.78□□□□□ -0.36
SSRP1-201ENST00000278412 RPL13P26373 211 aaKnown RBP12.78□□□□□ -0.36
SSRP1-201ENST00000278412 PON1P27169 355 aa12.78□□□□□ -0.36
SSRP1-201ENST00000278412 RFC5P40937 340 aa12.78□□□□□ -0.36
SSRP1-201ENST00000278412 SP3Q02447 781 aa12.78□□□□□ -0.36
SSRP1-201ENST00000278412 GRIK4Q16099 956 aa12.78□□□□□ -0.36
SSRP1-201ENST00000278412 SNRNP35Q16560 246 aaKnown RBP12.78□□□□□ -0.36
SSRP1-201ENST00000278412 DGKDQ16760 1214 aa12.78□□□□□ -0.36
SSRP1-201ENST00000278412 EEF1DP3Q658K8 133 aa12.78□□□□□ -0.36
SSRP1-201ENST00000278412 CXCL17Q6UXB2 119 aa12.78□□□□□ -0.36
SSRP1-201ENST00000278412 RRAGAQ7L523 313 aa12.78□□□□□ -0.36
SSRP1-201ENST00000278412 BAP1Q92560 729 aa12.78□□□□□ -0.36
SSRP1-201ENST00000278412 SIX2Q9NPC8 291 aa12.78□□□□□ -0.36
SSRP1-201ENST00000278412 TRIM10Q9UDY6 481 aa12.78□□□□□ -0.36
SSRP1-201ENST00000278412 CAPN11Q9UMQ6 739 aa12.78□□□□□ -0.36
SSRP1-201ENST00000278412 A6NJR5 290 aa12.78□□□□□ -0.36
SSRP1-201ENST00000278412 ADCY3O60266 1144 aa12.78□□□□□ -0.36
SSRP1-201ENST00000278412 AFPP02771 609 aaKnown RBP12.78□□□□□ -0.36
SSRP1-201ENST00000278412 NAMPTP43490 491 aa12.78□□□□□ -0.36
SSRP1-201ENST00000278412 BFSP1Q12934 665 aa12.78□□□□□ -0.36
SSRP1-201ENST00000278412 KIZQ2M2Z5 673 aa12.78□□□□□ -0.36
SSRP1-201ENST00000278412 CCAR2Q8N163 923 aaKnown RBP12.78□□□□□ -0.36
SSRP1-201ENST00000278412 XXYLT1Q8NBI6 393 aa12.78□□□□□ -0.36
SSRP1-201ENST00000278412 KAT5Q92993 513 aa12.78□□□□□ -0.36
SSRP1-201ENST00000278412 FAM167AQ96KS9 214 aa12.78□□□□□ -0.36
SSRP1-201ENST00000278412 TMEM206Q9H813 350 aa12.78□□□□□ -0.36
SSRP1-201ENST00000278412 IFT122Q9HBG6 1241 aa12.78□□□□□ -0.36
SSRP1-201ENST00000278412 SPTLC3Q9NUV7 552 aa12.78□□□□□ -0.36
SSRP1-201ENST00000278412 SLC5A4Q9NY91 659 aa12.78□□□□□ -0.36
SSRP1-201ENST00000278412 GCNT4Q9P109 453 aa12.78□□□□□ -0.36
SSRP1-201ENST00000278412 AKT3Q9Y243 479 aa12.78□□□□□ -0.36
SSRP1-201ENST00000278412 FRMD4BQ9Y2L6 1034 aa12.78□□□□□ -0.36
SSRP1-201ENST00000278412 LUC7L2Q9Y383 392 aaKnown RBP12.78□□□□□ -0.36
SSRP1-201ENST00000278412 LOC102724159A0A0B4J2E5 919 aa12.77□□□□□ -0.36
SSRP1-201ENST00000278412 INO80B-WBP1J3KQ70 363 aa12.77□□□□□ -0.36
SSRP1-201ENST00000278412 MSCO60682 206 aa12.77□□□□□ -0.36
SSRP1-201ENST00000278412 CALCAP01258 141 aa12.77□□□□□ -0.36
SSRP1-201ENST00000278412 CYBAP13498 195 aa12.77□□□□□ -0.36
SSRP1-201ENST00000278412 LIG4P49917 911 aa12.77□□□□□ -0.36
SSRP1-201ENST00000278412 PWP2Q15269 919 aaKnown RBP12.77□□□□□ -0.36
SSRP1-201ENST00000278412 MTHFD1LQ6UB35 978 aa12.77□□□□□ -0.36
SSRP1-201ENST00000278412 CRELD2Q6UXH1 353 aaPredicted RBP12.77□□□□□ -0.36
SSRP1-201ENST00000278412 STXBP4Q6ZWJ1 553 aa12.77□□□□□ -0.36
SSRP1-201ENST00000278412 PSPC1Q8WXF1 523 aaKnown RBP12.77□□□□□ -0.36
SSRP1-201ENST00000278412 SOCS4Q8WXH5 440 aa12.77□□□□□ -0.36
SSRP1-201ENST00000278412 CPB2Q96IY4 423 aa12.77□□□□□ -0.36
SSRP1-201ENST00000278412 TIPINQ9BVW5 301 aa12.77□□□□□ -0.36
SSRP1-201ENST00000278412 INO80BQ9C086 356 aaPredicted RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms