RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 TUBGCP2Q9BSJ2 902 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 CELF4Q9BZC1 486 aaKnown RBP9.87□□□□□ -0.83
PDGFC-201ENST00000274071 NACAP1Q9BZK3 213 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 DOLKQ9UPQ8 538 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 CARD8Q9Y2G2 431 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 GDAQ9Y2T3 454 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 HBS1LQ9Y450 684 aaKnown RBP9.87□□□□□ -0.83
PDGFC-201ENST00000274071 A0A1W2PQJ5 194 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 TMEM120BA0PK00 339 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 KCNK3O14649 394 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 STRNO43815 780 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 RANBP6O60518 1105 aaKnown RBP9.87□□□□□ -0.83
PDGFC-201ENST00000274071 PTPN4P29074 926 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 PCSK6P29122 969 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 ACADVLP49748 655 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 PFKPQ01813 784 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 DSG1Q02413 1049 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 PPP2R5CQ13362 524 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 ADRM1Q16186 407 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 KCTD21Q4G0X4 260 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 UBAP2Q5T6F2 1119 aaKnown RBP9.87□□□□□ -0.83
PDGFC-201ENST00000274071 KLHDC10Q6PID8 442 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 CCDC174Q6PII3 467 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 C1orf228Q6PIY5 440 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 CYB5R4Q7L1T6 521 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 TAOK1Q7L7X3 1001 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 TTC5Q8N0Z6 440 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 PRPF31Q8WWY3 499 aaKnown RBP9.87□□□□□ -0.83
PDGFC-201ENST00000274071 TGS1Q96RS0 853 aaKnown RBP9.87□□□□□ -0.83
PDGFC-201ENST00000274071 CADM1Q9BY67 442 aaKnown RBP9.87□□□□□ -0.83
PDGFC-201ENST00000274071 TRIM31Q9BZY9 425 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 MRPL46Q9H2W6 279 aaKnown RBP9.87□□□□□ -0.83
PDGFC-201ENST00000274071 TCP11L1Q9NUJ3 509 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 C9orf78Q9NZ63 289 aaPredicted RBP9.87□□□□□ -0.83
PDGFC-201ENST00000274071 SELENONQ9NZV5 590 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 CCPG1Q9ULG6 757 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 STX8Q9UNK0 236 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 GPC6Q9Y625 555 aaPredicted RBP9.87□□□□□ -0.83
PDGFC-201ENST00000274071 CBFA2T3O75081 653 aa9.86□□□□□ -0.83
PDGFC-201ENST00000274071 DDX58O95786 925 aaKnown RBP9.86□□□□□ -0.83
PDGFC-201ENST00000274071 GH1P01241 217 aa9.86□□□□□ -0.83
PDGFC-201ENST00000274071 VDRP11473 427 aa9.86□□□□□ -0.83
PDGFC-201ENST00000274071 CABP4P57796 275 aa9.86□□□□□ -0.83
PDGFC-201ENST00000274071 ANTXR2P58335 489 aa9.86□□□□□ -0.83
PDGFC-201ENST00000274071 SPIDRQ14159 915 aa9.86□□□□□ -0.83
PDGFC-201ENST00000274071 CWF19L2Q2TBE0 894 aaKnown RBP9.86□□□□□ -0.83
PDGFC-201ENST00000274071 RILPL1Q5EBL4 403 aa9.86□□□□□ -0.83
PDGFC-201ENST00000274071 ZNF658Q5TYW1 1059 aaPredicted RBP9.86□□□□□ -0.83
PDGFC-201ENST00000274071 CAPN12Q6ZSI9 719 aa9.86□□□□□ -0.83
PDGFC-201ENST00000274071 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.86□□□□□ -0.83
PDGFC-201ENST00000274071 SYMPKQ92797 1274 aaKnown RBP9.86□□□□□ -0.83
PDGFC-201ENST00000274071 GFM2Q969S9 779 aaKnown RBP9.86□□□□□ -0.83
PDGFC-201ENST00000274071 CCDC127Q96BQ5 260 aa9.86□□□□□ -0.83
PDGFC-201ENST00000274071 ECSITQ9BQ95 431 aa9.86□□□□□ -0.83
PDGFC-201ENST00000274071 AIPL1Q9NZN9 384 aa9.86□□□□□ -0.83
PDGFC-201ENST00000274071 XDHP47989 1333 aa9.86□□□□□ -0.83
PDGFC-201ENST00000274071 SH3PXD2BA1X283 911 aa9.86□□□□□ -0.83
PDGFC-201ENST00000274071 RASA4BC9J798 803 aa9.86□□□□□ -0.83
PDGFC-201ENST00000274071 RASA4O43374 803 aa9.86□□□□□ -0.83
PDGFC-201ENST00000274071 TBC1D12O60347 775 aa9.86□□□□□ -0.83
PDGFC-201ENST00000274071 PGM3O95394 542 aa9.86□□□□□ -0.83
PDGFC-201ENST00000274071 CYP2C9P11712 490 aa9.86□□□□□ -0.83
PDGFC-201ENST00000274071 ITGA4P13612 1032 aa9.86□□□□□ -0.83
PDGFC-201ENST00000274071 AUHQ13825 339 aaKnown RBP9.86□□□□□ -0.83
PDGFC-201ENST00000274071 ASTE1Q2TB18 679 aaPredicted RBP9.86□□□□□ -0.83
PDGFC-201ENST00000274071 FIGNQ5HY92 759 aa9.86□□□□□ -0.83
PDGFC-201ENST00000274071 METTL21CQ5VZV1 264 aa9.86□□□□□ -0.83
PDGFC-201ENST00000274071 FNBP1Q96RU3 617 aa9.86□□□□□ -0.83
PDGFC-201ENST00000274071 DKK3Q9UBP4 350 aa9.86□□□□□ -0.83
PDGFC-201ENST00000274071 DBNLQ9UJU6 430 aaKnown RBP9.86□□□□□ -0.83
PDGFC-201ENST00000274071 GIT1Q9Y2X7 761 aa9.86□□□□□ -0.83
PDGFC-201ENST00000274071 EPHB6O15197 1021 aa9.85□□□□□ -0.83
PDGFC-201ENST00000274071 KDM1AO60341 852 aa9.85□□□□□ -0.83
PDGFC-201ENST00000274071 HAND2P61296 217 aa9.85□□□□□ -0.83
PDGFC-201ENST00000274071 COG7P83436 770 aa9.85□□□□□ -0.83
PDGFC-201ENST00000274071 MSLNQ13421 630 aaPredicted RBP9.85□□□□□ -0.83
PDGFC-201ENST00000274071 GRM2Q14416 872 aa9.85□□□□□ -0.83
PDGFC-201ENST00000274071 TGFBIQ15582 683 aa9.85□□□□□ -0.83
PDGFC-201ENST00000274071 FAM209AQ5JX71 171 aa9.85□□□□□ -0.83
PDGFC-201ENST00000274071 PITPNM3Q9BZ71 974 aa9.85□□□□□ -0.83
PDGFC-201ENST00000274071 SLC7A5P2Q9GIP4 190 aa9.85□□□□□ -0.83
PDGFC-201ENST00000274071 SUGT1Q9Y2Z0 365 aa9.85□□□□□ -0.83
PDGFC-201ENST00000274071 MAPK13O15264 365 aa9.85□□□□□ -0.83
PDGFC-201ENST00000274071 SNRPA1P09661 255 aaKnown RBP9.85□□□□□ -0.83
PDGFC-201ENST00000274071 KLRC1P26715 233 aa9.85□□□□□ -0.83
PDGFC-201ENST00000274071 PPIDQ08752 370 aaKnown RBP9.85□□□□□ -0.83
PDGFC-201ENST00000274071 MKRN3Q13064 507 aaKnown RBP9.85□□□□□ -0.83
PDGFC-201ENST00000274071 LRP8Q14114 963 aa9.85□□□□□ -0.83
PDGFC-201ENST00000274071 MPP2Q14168 576 aa9.85□□□□□ -0.83
PDGFC-201ENST00000274071 VSTM1Q6UX27 236 aa9.85□□□□□ -0.83
PDGFC-201ENST00000274071 OTUD6AQ7L8S5 288 aa9.85□□□□□ -0.83
PDGFC-201ENST00000274071 BPHLQ86WA6 291 aaPredicted RBP9.85□□□□□ -0.83
PDGFC-201ENST00000274071 MB21D2Q8IYB1 491 aaPredicted RBP9.85□□□□□ -0.83
PDGFC-201ENST00000274071 ANKRD42Q8N9B4 389 aa9.85□□□□□ -0.83
PDGFC-201ENST00000274071 ACTRT1Q8TDG2 376 aa9.85□□□□□ -0.83
PDGFC-201ENST00000274071 GIPC3Q8TF64 312 aa9.85□□□□□ -0.83
PDGFC-201ENST00000274071 ESR2Q92731 530 aa9.85□□□□□ -0.83
PDGFC-201ENST00000274071 MAELQ96JY0 434 aaKnown RBP9.85□□□□□ -0.83
PDGFC-201ENST00000274071 PRICKLE1Q96MT3 831 aaPredicted RBP9.85□□□□□ -0.83
PDGFC-201ENST00000274071 EBF3Q9H4W6 596 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms